RNA–Protein interactions for RNA: ENST00000482581.1

PODXL-205, Transcript of podocalyxin like, humanhuman

TSL 2

Gene PODXL, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODXL-205ENST00000482581 NISCHQ9Y2I1 1504 aa24.41■■□□□ 1.5
PODXL-205ENST00000482581 CCDC180Q9P1Z9 1646 aa21.43■■□□□ 1.02
PODXL-205ENST00000482581 ZCCHC6Q5VYS8 1495 aaKnown RBP20.6■□□□□ 0.89
PODXL-205ENST00000482581 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
PODXL-205ENST00000482581 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
PODXL-205ENST00000482581 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
PODXL-205ENST00000482581 ABCC9O60706 1549 aa19.79■□□□□ 0.76
PODXL-205ENST00000482581 NACADO15069 1562 aa19.78■□□□□ 0.76
PODXL-205ENST00000482581 DCAF8L2P0C7V8 631 aa19.75■□□□□ 0.75
PODXL-205ENST00000482581 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
PODXL-205ENST00000482581 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
PODXL-205ENST00000482581 UNC13AQ9UPW8 1703 aa19.35■□□□□ 0.69
PODXL-205ENST00000482581 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.64
PODXL-205ENST00000482581 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
PODXL-205ENST00000482581 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
PODXL-205ENST00000482581 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
PODXL-205ENST00000482581 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
PODXL-205ENST00000482581 MROH2BQ7Z745 1585 aa18.84■□□□□ 0.61
PODXL-205ENST00000482581 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
PODXL-205ENST00000482581 WIZO95785 1651 aa18.76■□□□□ 0.59
PODXL-205ENST00000482581 PEG3Q9GZU2 1588 aa18.61■□□□□ 0.57
PODXL-205ENST00000482581 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
PODXL-205ENST00000482581 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
PODXL-205ENST00000482581 CHIC1Q5VXU3 224 aa18.44■□□□□ 0.54
PODXL-205ENST00000482581 SMARCA2P51531 1590 aa18.43■□□□□ 0.54
PODXL-205ENST00000482581 EIF4G1Q04637 1599 aaKnown RBP18.43■□□□□ 0.54
PODXL-205ENST00000482581 ATAD2BQ9ULI0 1458 aa18.34■□□□□ 0.53
PODXL-205ENST00000482581 CCDC88BA6NC98 1476 aa18.28■□□□□ 0.52
PODXL-205ENST00000482581 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
PODXL-205ENST00000482581 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
PODXL-205ENST00000482581 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
PODXL-205ENST00000482581 PRDM2Q13029 1718 aa18.07■□□□□ 0.48
PODXL-205ENST00000482581 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
PODXL-205ENST00000482581 ABCC8Q09428 1581 aa17.99■□□□□ 0.47
PODXL-205ENST00000482581 TRIM41Q8WV44 630 aa17.98■□□□□ 0.47
PODXL-205ENST00000482581 BIVM-ERCC5R4GMW8 1640 aa17.84■□□□□ 0.45
PODXL-205ENST00000482581 SYNJ1O43426 1573 aa17.83■□□□□ 0.45
PODXL-205ENST00000482581 WRNQ14191 1432 aaPredicted RBP eCLIP17.83■□□□□ 0.45
PODXL-205ENST00000482581 CFTRP13569 1480 aa17.82■□□□□ 0.44
PODXL-205ENST00000482581 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
PODXL-205ENST00000482581 EEA1Q15075 1411 aa17.73■□□□□ 0.43
PODXL-205ENST00000482581 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PODXL-205ENST00000482581 CUX1P39880 1505 aa17.63■□□□□ 0.41
PODXL-205ENST00000482581 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
PODXL-205ENST00000482581 LAMC3Q9Y6N6 1575 aa17.62■□□□□ 0.41
PODXL-205ENST00000482581 KIF21BO75037 1637 aa17.59■□□□□ 0.41
PODXL-205ENST00000482581 SOGA1O94964 1423 aa17.59■□□□□ 0.41
PODXL-205ENST00000482581 FAM9AQ8IZU1 332 aaPredicted RBP17.57■□□□□ 0.4
PODXL-205ENST00000482581 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
PODXL-205ENST00000482581 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
PODXL-205ENST00000482581 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
PODXL-205ENST00000482581 GOLGA3Q08378 1498 aa17.47■□□□□ 0.39
PODXL-205ENST00000482581 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
PODXL-205ENST00000482581 NESP48681 1621 aa17.45■□□□□ 0.38
PODXL-205ENST00000482581 KIF21AQ7Z4S6 1674 aa17.44■□□□□ 0.38
PODXL-205ENST00000482581 CSRNP3Q8WYN3 585 aa17.43■□□□□ 0.38
PODXL-205ENST00000482581 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
PODXL-205ENST00000482581 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
PODXL-205ENST00000482581 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
PODXL-205ENST00000482581 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
PODXL-205ENST00000482581 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
PODXL-205ENST00000482581 KIF27Q86VH2 1401 aa17.36■□□□□ 0.37
PODXL-205ENST00000482581 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
PODXL-205ENST00000482581 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
PODXL-205ENST00000482581 PRXQ9BXM0 1461 aa17.31■□□□□ 0.36
PODXL-205ENST00000482581 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
PODXL-205ENST00000482581 ABCA10Q8WWZ4 1543 aa17.28■□□□□ 0.36
PODXL-205ENST00000482581 POLA1P09884 1462 aaPredicted RBP17.28■□□□□ 0.36
PODXL-205ENST00000482581 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
PODXL-205ENST00000482581 CUX2O14529 1486 aa17.26■□□□□ 0.35
PODXL-205ENST00000482581 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
PODXL-205ENST00000482581 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
PODXL-205ENST00000482581 CUL7Q14999 1698 aa17.23■□□□□ 0.35
PODXL-205ENST00000482581 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
PODXL-205ENST00000482581 MRC2Q9UBG0 1479 aa17.18■□□□□ 0.34
PODXL-205ENST00000482581 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
PODXL-205ENST00000482581 UBTFP17480 764 aaKnown RBP17.17■□□□□ 0.34
PODXL-205ENST00000482581 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
PODXL-205ENST00000482581 WDR62O43379 1518 aa17.14■□□□□ 0.33
PODXL-205ENST00000482581 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
PODXL-205ENST00000482581 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
PODXL-205ENST00000482581 CLIP1P30622 1438 aa17.13■□□□□ 0.33
PODXL-205ENST00000482581 IGF1RP08069 1367 aa17.12■□□□□ 0.33
PODXL-205ENST00000482581 THOC2Q8NI27 1593 aaKnown RBP17.1■□□□□ 0.33
PODXL-205ENST00000482581 TRIM26Q12899 539 aaPredicted RBP17.07■□□□□ 0.32
PODXL-205ENST00000482581 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
PODXL-205ENST00000482581 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
PODXL-205ENST00000482581 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
PODXL-205ENST00000482581 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
PODXL-205ENST00000482581 ARAP1Q96P48 1450 aa17.01■□□□□ 0.31
PODXL-205ENST00000482581 IFT140Q96RY7 1462 aa16.99■□□□□ 0.31
PODXL-205ENST00000482581 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
PODXL-205ENST00000482581 ADAMTS12P58397 1594 aa16.97■□□□□ 0.31
PODXL-205ENST00000482581 ARHGAP35Q9NRY4 1499 aa16.94■□□□□ 0.3
PODXL-205ENST00000482581 EFCAB5A4FU69 1503 aa16.94■□□□□ 0.3
PODXL-205ENST00000482581 EIF4G3O43432 1585 aaKnown RBP16.91■□□□□ 0.3
PODXL-205ENST00000482581 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
PODXL-205ENST00000482581 GRIN2BQ13224 1484 aa16.87■□□□□ 0.29
PODXL-205ENST00000482581 SAMD9Q5K651 1589 aa16.86■□□□□ 0.29
PODXL-205ENST00000482581 FHAD1B1AJZ9 1412 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms