RNA–Protein interactions for RNA: ENST00000482575.1

PCNT-206, Transcript of pericentrin, humanhuman

TSL 3

Gene PCNT, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNT-206ENST00000482575 NISCHQ9Y2I1 1504 aa26.23■■□□□ 1.79
PCNT-206ENST00000482575 CCDC180Q9P1Z9 1646 aa23.58■■□□□ 1.36
PCNT-206ENST00000482575 ABCC9O60706 1549 aa23.51■■□□□ 1.35
PCNT-206ENST00000482575 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
PCNT-206ENST00000482575 NACADO15069 1562 aa22.28■■□□□ 1.16
PCNT-206ENST00000482575 DNAJC5BQ9UF47 199 aa22.07■■□□□ 1.12
PCNT-206ENST00000482575 DCAF8L2P0C7V8 631 aa22.05■■□□□ 1.12
PCNT-206ENST00000482575 MYO15BQ96JP2 1530 aa22.01■■□□□ 1.11
PCNT-206ENST00000482575 UNC13AQ9UPW8 1703 aa21.92■■□□□ 1.1
PCNT-206ENST00000482575 PABPN1Q86U42 306 aaKnown RBP eCLIP21.87■■□□□ 1.09
PCNT-206ENST00000482575 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
PCNT-206ENST00000482575 ZCCHC6Q5VYS8 1495 aaKnown RBP21.74■■□□□ 1.07
PCNT-206ENST00000482575 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.07
PCNT-206ENST00000482575 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
PCNT-206ENST00000482575 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
PCNT-206ENST00000482575 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
PCNT-206ENST00000482575 EIF4G1Q04637 1599 aaKnown RBP21.24■□□□□ 0.99
PCNT-206ENST00000482575 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
PCNT-206ENST00000482575 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
PCNT-206ENST00000482575 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
PCNT-206ENST00000482575 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
PCNT-206ENST00000482575 SMARCA2P51531 1590 aa20.44■□□□□ 0.86
PCNT-206ENST00000482575 HMGXB3Q12766 1538 aa20.42■□□□□ 0.86
PCNT-206ENST00000482575 BAZ1AQ9NRL2 1556 aaPredicted RBP20.37■□□□□ 0.85
PCNT-206ENST00000482575 CUX2O14529 1486 aa20.32■□□□□ 0.84
PCNT-206ENST00000482575 ERCC6Q03468 1493 aa20.31■□□□□ 0.84
PCNT-206ENST00000482575 DNAJC5Q9H3Z4 198 aa20.3■□□□□ 0.84
PCNT-206ENST00000482575 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
PCNT-206ENST00000482575 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
PCNT-206ENST00000482575 NESP48681 1621 aa20.2■□□□□ 0.82
PCNT-206ENST00000482575 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
PCNT-206ENST00000482575 LAMC3Q9Y6N6 1575 aa20.11■□□□□ 0.81
PCNT-206ENST00000482575 THOC2Q8NI27 1593 aaKnown RBP20.04■□□□□ 0.8
PCNT-206ENST00000482575 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
PCNT-206ENST00000482575 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
PCNT-206ENST00000482575 WIZO95785 1651 aa19.94■□□□□ 0.78
PCNT-206ENST00000482575 CADPSQ9ULU8 1353 aa19.92■□□□□ 0.78
PCNT-206ENST00000482575 MRC2Q9UBG0 1479 aa19.79■□□□□ 0.76
PCNT-206ENST00000482575 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.76
PCNT-206ENST00000482575 WDR62O43379 1518 aa19.77■□□□□ 0.76
PCNT-206ENST00000482575 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
PCNT-206ENST00000482575 TOP2AP11388 1531 aaKnown RBP19.71■□□□□ 0.75
PCNT-206ENST00000482575 CFTRP13569 1480 aa19.7■□□□□ 0.74
PCNT-206ENST00000482575 FANCD2Q9BXW9 1451 aa19.69■□□□□ 0.74
PCNT-206ENST00000482575 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
PCNT-206ENST00000482575 PRDM2Q13029 1718 aa19.52■□□□□ 0.72
PCNT-206ENST00000482575 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
PCNT-206ENST00000482575 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
PCNT-206ENST00000482575 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
PCNT-206ENST00000482575 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
PCNT-206ENST00000482575 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
PCNT-206ENST00000482575 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
PCNT-206ENST00000482575 ZNF608Q9ULD9 1512 aaPredicted RBP19.27■□□□□ 0.68
PCNT-206ENST00000482575 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
PCNT-206ENST00000482575 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
PCNT-206ENST00000482575 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
PCNT-206ENST00000482575 RIMBP3CA6NJZ7 1639 aa19.12■□□□□ 0.65
PCNT-206ENST00000482575 RIMBP3BA6NNM3 1639 aa19.12■□□□□ 0.65
PCNT-206ENST00000482575 RIMBP3Q9UFD9 1639 aa19.12■□□□□ 0.65
PCNT-206ENST00000482575 POLA1P09884 1462 aaPredicted RBP19.12■□□□□ 0.65
PCNT-206ENST00000482575 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.65
PCNT-206ENST00000482575 ARHGEF11O15085 1522 aa19.06■□□□□ 0.64
PCNT-206ENST00000482575 CHD1O14646 1710 aa19.05■□□□□ 0.64
PCNT-206ENST00000482575 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
PCNT-206ENST00000482575 SOGA1O94964 1423 aa19.02■□□□□ 0.64
PCNT-206ENST00000482575 WDR97A6NE52 1622 aa19■□□□□ 0.63
PCNT-206ENST00000482575 FGD5Q6ZNL6 1462 aa18.99■□□□□ 0.63
PCNT-206ENST00000482575 CUX1P39880 1505 aa18.98■□□□□ 0.63
PCNT-206ENST00000482575 TDRD9Q8NDG6 1382 aaKnown RBP18.97■□□□□ 0.63
PCNT-206ENST00000482575 FBLN2P98095 1184 aa18.93■□□□□ 0.62
PCNT-206ENST00000482575 SNAPC4Q5SXM2 1469 aa18.91■□□□□ 0.62
PCNT-206ENST00000482575 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
PCNT-206ENST00000482575 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
PCNT-206ENST00000482575 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
PCNT-206ENST00000482575 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
PCNT-206ENST00000482575 CLASP1Q7Z460 1538 aa18.84■□□□□ 0.61
PCNT-206ENST00000482575 SYNJ1O43426 1573 aa18.83■□□□□ 0.6
PCNT-206ENST00000482575 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
PCNT-206ENST00000482575 CHMP7Q8WUX9 453 aaPredicted RBP18.82■□□□□ 0.6
PCNT-206ENST00000482575 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
PCNT-206ENST00000482575 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
PCNT-206ENST00000482575 GAPVD1Q14C86 1478 aa18.8■□□□□ 0.6
PCNT-206ENST00000482575 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
PCNT-206ENST00000482575 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
PCNT-206ENST00000482575 WRNQ14191 1432 aaPredicted RBP eCLIP18.7■□□□□ 0.58
PCNT-206ENST00000482575 BIVM-ERCC5R4GMW8 1640 aa18.7■□□□□ 0.58
PCNT-206ENST00000482575 TOP2BQ02880 1626 aa18.68■□□□□ 0.58
PCNT-206ENST00000482575 TRHP20396 242 aaPredicted RBP18.67■□□□□ 0.58
PCNT-206ENST00000482575 GRIN2AQ12879 1464 aa18.64■□□□□ 0.57
PCNT-206ENST00000482575 ADAMTS12P58397 1594 aa18.63■□□□□ 0.57
PCNT-206ENST00000482575 NUP160Q12769 1436 aa18.58■□□□□ 0.57
PCNT-206ENST00000482575 FHAD1B1AJZ9 1412 aa18.57■□□□□ 0.56
PCNT-206ENST00000482575 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
PCNT-206ENST00000482575 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
PCNT-206ENST00000482575 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
PCNT-206ENST00000482575 SHROOM2Q13796 1616 aa18.51■□□□□ 0.55
PCNT-206ENST00000482575 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
PCNT-206ENST00000482575 RUSC2Q8N2Y8 1516 aa18.37■□□□□ 0.53
PCNT-206ENST00000482575 JPH4Q96JJ6 628 aa18.36■□□□□ 0.53
PCNT-206ENST00000482575 KIF27Q86VH2 1401 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms