RNA–Protein interactions for RNA: ENST00000482543.1

PTK2B-207, Transcript of protein tyrosine kinase 2 beta, humanhuman

TSL 5

Gene PTK2B, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2B-207ENST00000482543 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
PTK2B-207ENST00000482543 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
PTK2B-207ENST00000482543 ABCC9O60706 1549 aa29.46■■■□□ 2.31
PTK2B-207ENST00000482543 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
PTK2B-207ENST00000482543 NACADO15069 1562 aa28.16■■■□□ 2.1
PTK2B-207ENST00000482543 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
PTK2B-207ENST00000482543 ZCCHC6Q5VYS8 1495 aaKnown RBP28.02■■■□□ 2.08
PTK2B-207ENST00000482543 MYO15BQ96JP2 1530 aa27.91■■■□□ 2.06
PTK2B-207ENST00000482543 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
PTK2B-207ENST00000482543 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
PTK2B-207ENST00000482543 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
PTK2B-207ENST00000482543 BICRAQ9NZM4 1560 aa27.45■■□□□ 1.99
PTK2B-207ENST00000482543 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
PTK2B-207ENST00000482543 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
PTK2B-207ENST00000482543 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
PTK2B-207ENST00000482543 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
PTK2B-207ENST00000482543 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
PTK2B-207ENST00000482543 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
PTK2B-207ENST00000482543 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
PTK2B-207ENST00000482543 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
PTK2B-207ENST00000482543 ATAD2BQ9ULI0 1458 aa26.01■■□□□ 1.75
PTK2B-207ENST00000482543 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
PTK2B-207ENST00000482543 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
PTK2B-207ENST00000482543 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
PTK2B-207ENST00000482543 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
PTK2B-207ENST00000482543 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
PTK2B-207ENST00000482543 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
PTK2B-207ENST00000482543 WIZO95785 1651 aa25.72■■□□□ 1.71
PTK2B-207ENST00000482543 RSF1Q96T23 1441 aaPredicted RBP25.58■■□□□ 1.69
PTK2B-207ENST00000482543 NESP48681 1621 aa25.48■■□□□ 1.67
PTK2B-207ENST00000482543 TOP2AP11388 1531 aaKnown RBP25.38■■□□□ 1.65
PTK2B-207ENST00000482543 ERCC6Q03468 1493 aa25.37■■□□□ 1.65
PTK2B-207ENST00000482543 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
PTK2B-207ENST00000482543 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
PTK2B-207ENST00000482543 CADPSQ9ULU8 1353 aa25.2■■□□□ 1.63
PTK2B-207ENST00000482543 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.61
PTK2B-207ENST00000482543 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
PTK2B-207ENST00000482543 CUX2O14529 1486 aa25.1■■□□□ 1.61
PTK2B-207ENST00000482543 CCDC88BA6NC98 1476 aa25.08■■□□□ 1.6
PTK2B-207ENST00000482543 CFTRP13569 1480 aa25.05■■□□□ 1.6
PTK2B-207ENST00000482543 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
PTK2B-207ENST00000482543 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
PTK2B-207ENST00000482543 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
PTK2B-207ENST00000482543 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
PTK2B-207ENST00000482543 WDR62O43379 1518 aa24.86■■□□□ 1.57
PTK2B-207ENST00000482543 SUPT5HO00267 1087 aaKnown RBP24.86■■□□□ 1.57
PTK2B-207ENST00000482543 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
PTK2B-207ENST00000482543 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
PTK2B-207ENST00000482543 DNMBPQ6XZF7 1577 aa24.54■■□□□ 1.52
PTK2B-207ENST00000482543 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
PTK2B-207ENST00000482543 DNAJC5Q9H3Z4 198 aa24.43■■□□□ 1.5
PTK2B-207ENST00000482543 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
PTK2B-207ENST00000482543 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
PTK2B-207ENST00000482543 CUX1P39880 1505 aa24.36■■□□□ 1.49
PTK2B-207ENST00000482543 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
PTK2B-207ENST00000482543 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
PTK2B-207ENST00000482543 FGD5Q6ZNL6 1462 aa24.29■■□□□ 1.48
PTK2B-207ENST00000482543 EIF4G3O43432 1585 aaKnown RBP24.29■■□□□ 1.48
PTK2B-207ENST00000482543 RAD54L2Q9Y4B4 1467 aa24.27■■□□□ 1.48
PTK2B-207ENST00000482543 SOGA1O94964 1423 aa24.2■■□□□ 1.46
PTK2B-207ENST00000482543 AQRO60306 1485 aaKnown RBP eCLIP24.19■■□□□ 1.462e-6■□□□□ 9
PTK2B-207ENST00000482543 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
PTK2B-207ENST00000482543 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
PTK2B-207ENST00000482543 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
PTK2B-207ENST00000482543 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
PTK2B-207ENST00000482543 TOP2BQ02880 1626 aa24.11■■□□□ 1.45
PTK2B-207ENST00000482543 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
PTK2B-207ENST00000482543 CHD1O14646 1710 aa24.03■■□□□ 1.44
PTK2B-207ENST00000482543 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
PTK2B-207ENST00000482543 PBRM1Q86U86 1689 aa24■■□□□ 1.43
PTK2B-207ENST00000482543 OSCARQ8IYS5 282 aa23.99■■□□□ 1.43
PTK2B-207ENST00000482543 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
PTK2B-207ENST00000482543 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
PTK2B-207ENST00000482543 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
PTK2B-207ENST00000482543 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
PTK2B-207ENST00000482543 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
PTK2B-207ENST00000482543 FBLN2P98095 1184 aa23.88■■□□□ 1.41
PTK2B-207ENST00000482543 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
PTK2B-207ENST00000482543 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
PTK2B-207ENST00000482543 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
PTK2B-207ENST00000482543 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
PTK2B-207ENST00000482543 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
PTK2B-207ENST00000482543 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
PTK2B-207ENST00000482543 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
PTK2B-207ENST00000482543 ARHGEF11O15085 1522 aa23.71■■□□□ 1.39
PTK2B-207ENST00000482543 CLASP1Q7Z460 1538 aa23.71■■□□□ 1.39
PTK2B-207ENST00000482543 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
PTK2B-207ENST00000482543 GRIN2AQ12879 1464 aa23.66■■□□□ 1.38
PTK2B-207ENST00000482543 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.37
PTK2B-207ENST00000482543 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
PTK2B-207ENST00000482543 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
PTK2B-207ENST00000482543 NUP160Q12769 1436 aa23.54■■□□□ 1.36
PTK2B-207ENST00000482543 ARAP1Q96P48 1450 aa23.53■■□□□ 1.36
PTK2B-207ENST00000482543 IGF1RP08069 1367 aa23.52■■□□□ 1.36
PTK2B-207ENST00000482543 CUL7Q14999 1698 aa23.51■■□□□ 1.35
PTK2B-207ENST00000482543 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
PTK2B-207ENST00000482543 CYB5RLQ6IPT4 315 aa23.44■■□□□ 1.34
PTK2B-207ENST00000482543 ERCC6L2Q5T890 1561 aa23.44■■□□□ 1.34
PTK2B-207ENST00000482543 SHROOM2Q13796 1616 aa23.42■■□□□ 1.34
PTK2B-207ENST00000482543 CARMIL1Q5VZK9 1371 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 353.7 ms