RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 AEBP2Q6ZN18 517 aaPredicted RBP19.45■□□□□ 0.7
CCNC-204ENST00000482541 CHIC1Q5VXU3 224 aa19.37■□□□□ 0.69
CCNC-204ENST00000482541 NISCHQ9Y2I1 1504 aa19.13■□□□□ 0.65
CCNC-204ENST00000482541 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
CCNC-204ENST00000482541 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
CCNC-204ENST00000482541 ABCC9O60706 1549 aa16.93■□□□□ 0.3
CCNC-204ENST00000482541 SENP3Q9H4L4 574 aaPredicted RBP16.39■□□□□ 0.21
CCNC-204ENST00000482541 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
CCNC-204ENST00000482541 NACADO15069 1562 aa16.16■□□□□ 0.18
CCNC-204ENST00000482541 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
CCNC-204ENST00000482541 MYO15BQ96JP2 1530 aa16.01■□□□□ 0.15
CCNC-204ENST00000482541 PLPPR3Q6T4P5 718 aa15.9■□□□□ 0.14
CCNC-204ENST00000482541 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
CCNC-204ENST00000482541 DCAF1Q9Y4B6 1507 aa15.84■□□□□ 0.13
CCNC-204ENST00000482541 UNC13AQ9UPW8 1703 aa15.81■□□□□ 0.12
CCNC-204ENST00000482541 PABPN1Q86U42 306 aaKnown RBP eCLIP15.8■□□□□ 0.12
CCNC-204ENST00000482541 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
CCNC-204ENST00000482541 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.11
CCNC-204ENST00000482541 SHROOM4Q9ULL8 1493 aa15.56■□□□□ 0.08
CCNC-204ENST00000482541 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
CCNC-204ENST00000482541 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
CCNC-204ENST00000482541 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
CCNC-204ENST00000482541 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
CCNC-204ENST00000482541 FOXD1Q16676 465 aa15.19■□□□□ 0.02
CCNC-204ENST00000482541 ADRA2BP18089 450 aa14.96□□□□□ -0.01
CCNC-204ENST00000482541 PPP6R1Q9UPN7 881 aa14.96□□□□□ -0.01
CCNC-204ENST00000482541 NCAPD3P42695 1498 aa14.92□□□□□ -0.02
CCNC-204ENST00000482541 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
CCNC-204ENST00000482541 SMARCA4P51532 1647 aa14.87□□□□□ -0.03
CCNC-204ENST00000482541 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
CCNC-204ENST00000482541 SMARCA2P51531 1590 aa14.84□□□□□ -0.03
CCNC-204ENST00000482541 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
CCNC-204ENST00000482541 HMGXB3Q12766 1538 aa14.79□□□□□ -0.04
CCNC-204ENST00000482541 PEG3Q9GZU2 1588 aa14.76□□□□□ -0.05
CCNC-204ENST00000482541 BAZ1BQ9UIG0 1483 aaKnown RBP14.73□□□□□ -0.05
CCNC-204ENST00000482541 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
CCNC-204ENST00000482541 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
CCNC-204ENST00000482541 NESP48681 1621 aa14.58□□□□□ -0.08
CCNC-204ENST00000482541 CUX2O14529 1486 aa14.57□□□□□ -0.08
CCNC-204ENST00000482541 LAMC3Q9Y6N6 1575 aa14.55□□□□□ -0.08
CCNC-204ENST00000482541 WIZO95785 1651 aa14.54□□□□□ -0.08
CCNC-204ENST00000482541 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
CCNC-204ENST00000482541 PDS5BQ9NTI5 1447 aa14.48□□□□□ -0.09
CCNC-204ENST00000482541 CADPSQ9ULU8 1353 aa14.48□□□□□ -0.09
CCNC-204ENST00000482541 PIAS4Q8N2W9 510 aaPredicted RBP14.43□□□□□ -0.1
CCNC-204ENST00000482541 DNAJC5Q9H3Z4 198 aa14.43□□□□□ -0.1
CCNC-204ENST00000482541 THOC2Q8NI27 1593 aaKnown RBP14.4□□□□□ -0.1
CCNC-204ENST00000482541 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
CCNC-204ENST00000482541 TOP2AP11388 1531 aaKnown RBP14.38□□□□□ -0.11
CCNC-204ENST00000482541 CFTRP13569 1480 aa14.32□□□□□ -0.12
CCNC-204ENST00000482541 MRC2Q9UBG0 1479 aa14.3□□□□□ -0.12
CCNC-204ENST00000482541 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
CCNC-204ENST00000482541 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
CCNC-204ENST00000482541 WDR62O43379 1518 aa14.26□□□□□ -0.13
CCNC-204ENST00000482541 KCNA4P22459 653 aa14.24□□□□□ -0.13
CCNC-204ENST00000482541 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
CCNC-204ENST00000482541 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
CCNC-204ENST00000482541 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
CCNC-204ENST00000482541 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
CCNC-204ENST00000482541 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
CCNC-204ENST00000482541 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
CCNC-204ENST00000482541 IFT140Q96RY7 1462 aa14□□□□□ -0.17
CCNC-204ENST00000482541 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
CCNC-204ENST00000482541 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
CCNC-204ENST00000482541 SUPT5HO00267 1087 aaKnown RBP13.95□□□□□ -0.18
CCNC-204ENST00000482541 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
CCNC-204ENST00000482541 POLA1P09884 1462 aaPredicted RBP13.88□□□□□ -0.19
CCNC-204ENST00000482541 TARBP1Q13395 1621 aaKnown RBP13.88□□□□□ -0.19
CCNC-204ENST00000482541 SOGA1O94964 1423 aa13.85□□□□□ -0.19
CCNC-204ENST00000482541 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
CCNC-204ENST00000482541 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCNC-204ENST00000482541 RAD54L2Q9Y4B4 1467 aa13.82□□□□□ -0.2
CCNC-204ENST00000482541 CUX1P39880 1505 aa13.82□□□□□ -0.2
CCNC-204ENST00000482541 MSH5O43196 834 aa13.81□□□□□ -0.2
CCNC-204ENST00000482541 FGD5Q6ZNL6 1462 aa13.81□□□□□ -0.2
CCNC-204ENST00000482541 TRIM41Q8WV44 630 aa13.8□□□□□ -0.2
CCNC-204ENST00000482541 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
CCNC-204ENST00000482541 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
CCNC-204ENST00000482541 WDR97A6NE52 1622 aa13.78□□□□□ -0.2
CCNC-204ENST00000482541 FBLN2P98095 1184 aa13.74□□□□□ -0.21
CCNC-204ENST00000482541 CHD1O14646 1710 aa13.72□□□□□ -0.21
CCNC-204ENST00000482541 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
CCNC-204ENST00000482541 GRIN2BQ13224 1484 aa13.7□□□□□ -0.22
CCNC-204ENST00000482541 MAGI1Q96QZ7 1491 aaPredicted RBP13.7□□□□□ -0.22
CCNC-204ENST00000482541 RIMBP3CA6NJZ7 1639 aa13.7□□□□□ -0.22
CCNC-204ENST00000482541 RIMBP3BA6NNM3 1639 aa13.7□□□□□ -0.22
CCNC-204ENST00000482541 RIMBP3Q9UFD9 1639 aa13.7□□□□□ -0.22
CCNC-204ENST00000482541 SNAPC4Q5SXM2 1469 aa13.69□□□□□ -0.22
CCNC-204ENST00000482541 CHMP7Q8WUX9 453 aaPredicted RBP13.69□□□□□ -0.22
CCNC-204ENST00000482541 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
CCNC-204ENST00000482541 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
CCNC-204ENST00000482541 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
CCNC-204ENST00000482541 ARHGEF11O15085 1522 aa13.68□□□□□ -0.22
CCNC-204ENST00000482541 TOP2BQ02880 1626 aa13.65□□□□□ -0.22
CCNC-204ENST00000482541 BIVM-ERCC5R4GMW8 1640 aa13.65□□□□□ -0.22
CCNC-204ENST00000482541 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
CCNC-204ENST00000482541 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
CCNC-204ENST00000482541 NPM3O75607 178 aaKnown RBP13.64□□□□□ -0.23
CCNC-204ENST00000482541 ABCA5Q8WWZ7 1642 aa13.62□□□□□ -0.23
CCNC-204ENST00000482541 PBRM1Q86U86 1689 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms