RNA–Protein interactions for RNA: ENST00000482482.1

TBRG4-211, Transcript of transforming growth factor beta regulator 4, humanhuman

TSL 5

Gene TBRG4, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG4-211ENST00000482482 NISCHQ9Y2I1 1504 aa40.6■■■■■ 4.09
TBRG4-211ENST00000482482 CCDC180Q9P1Z9 1646 aa36.11■■■■□ 3.37
TBRG4-211ENST00000482482 ABCC9O60706 1549 aa35.66■■■■□ 3.3
TBRG4-211ENST00000482482 DCAF8L2P0C7V8 631 aa34.17■■■■□ 3.06
TBRG4-211ENST00000482482 RB1CC1Q8TDY2 1594 aa34.17■■■■□ 3.06
TBRG4-211ENST00000482482 NACADO15069 1562 aa34.08■■■■□ 3.05
TBRG4-211ENST00000482482 MYO15BQ96JP2 1530 aa33.8■■■■□ 3
TBRG4-211ENST00000482482 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■□□ 2.99
TBRG4-211ENST00000482482 DCAF1Q9Y4B6 1507 aa33.57■■■□□ 2.96
TBRG4-211ENST00000482482 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.93
TBRG4-211ENST00000482482 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
TBRG4-211ENST00000482482 BICRAQ9NZM4 1560 aa33.1■■■□□ 2.89
TBRG4-211ENST00000482482 DNAJC5BQ9UF47 199 aa32.98■■■□□ 2.87
TBRG4-211ENST00000482482 SCRIBQ14160 1630 aa32.98■■■□□ 2.87
TBRG4-211ENST00000482482 SHROOM4Q9ULL8 1493 aa32.77■■■□□ 2.84
TBRG4-211ENST00000482482 EIF4G1Q04637 1599 aaKnown RBP32.28■■■□□ 2.76
TBRG4-211ENST00000482482 CC2D2AQ9P2K1 1620 aa32.2■■■□□ 2.75
TBRG4-211ENST00000482482 CECR2Q9BXF3 1484 aa32.08■■■□□ 2.73
TBRG4-211ENST00000482482 SMARCA4P51532 1647 aa31.51■■■□□ 2.63
TBRG4-211ENST00000482482 NCAPD3P42695 1498 aa31.49■■■□□ 2.63
TBRG4-211ENST00000482482 BAZ1AQ9NRL2 1556 aaPredicted RBP31.48■■■□□ 2.63
TBRG4-211ENST00000482482 ATAD2BQ9ULI0 1458 aa31.46■■■□□ 2.63
TBRG4-211ENST00000482482 SMARCA2P51531 1590 aa31.39■■■□□ 2.61
TBRG4-211ENST00000482482 MROH2BQ7Z745 1585 aa31.28■■■□□ 2.6
TBRG4-211ENST00000482482 HMGXB3Q12766 1538 aa31.25■■■□□ 2.59
TBRG4-211ENST00000482482 PEG3Q9GZU2 1588 aa31.21■■■□□ 2.59
TBRG4-211ENST00000482482 BAZ1BQ9UIG0 1483 aaKnown RBP31.19■■■□□ 2.58
TBRG4-211ENST00000482482 WIZO95785 1651 aa30.9■■■□□ 2.54
TBRG4-211ENST00000482482 RSF1Q96T23 1441 aaPredicted RBP30.88■■■□□ 2.53
TBRG4-211ENST00000482482 ERCC6Q03468 1493 aa30.77■■■□□ 2.52
TBRG4-211ENST00000482482 NESP48681 1621 aa30.77■■■□□ 2.52
TBRG4-211ENST00000482482 LAMC3Q9Y6N6 1575 aa30.65■■■□□ 2.5
TBRG4-211ENST00000482482 CADPSQ9ULU8 1353 aa30.58■■■□□ 2.49
TBRG4-211ENST00000482482 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.49
TBRG4-211ENST00000482482 PDS5BQ9NTI5 1447 aa30.52■■■□□ 2.48
TBRG4-211ENST00000482482 CUX2O14529 1486 aa30.51■■■□□ 2.48
TBRG4-211ENST00000482482 CFTRP13569 1480 aa30.31■■■□□ 2.44
TBRG4-211ENST00000482482 KIF21AQ7Z4S6 1674 aa30.31■■■□□ 2.44
TBRG4-211ENST00000482482 THOC2Q8NI27 1593 aaKnown RBP30.29■■■□□ 2.44
TBRG4-211ENST00000482482 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.44
TBRG4-211ENST00000482482 FANCD2Q9BXW9 1451 aa30.2■■■□□ 2.43
TBRG4-211ENST00000482482 MRC2Q9UBG0 1479 aa30.18■■■□□ 2.42
TBRG4-211ENST00000482482 CEP164Q9UPV0 1460 aa30.18■■■□□ 2.42
TBRG4-211ENST00000482482 WDR62O43379 1518 aa30.05■■■□□ 2.4
TBRG4-211ENST00000482482 SUPT5HO00267 1087 aaKnown RBP30.01■■■□□ 2.39
TBRG4-211ENST00000482482 DNAJC5Q9H3Z4 198 aa29.91■■■□□ 2.38
TBRG4-211ENST00000482482 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
TBRG4-211ENST00000482482 URB2Q14146 1524 aaKnown RBP29.88■■■□□ 2.37
TBRG4-211ENST00000482482 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
TBRG4-211ENST00000482482 TOPBP1Q92547 1522 aa29.67■■■□□ 2.34
TBRG4-211ENST00000482482 DNMBPQ6XZF7 1577 aa29.59■■■□□ 2.33
TBRG4-211ENST00000482482 IFT140Q96RY7 1462 aa29.57■■■□□ 2.32
TBRG4-211ENST00000482482 ZNF608Q9ULD9 1512 aaPredicted RBP29.43■■■□□ 2.3
TBRG4-211ENST00000482482 POLA1P09884 1462 aaPredicted RBP29.41■■■□□ 2.3
TBRG4-211ENST00000482482 CUX1P39880 1505 aa29.35■■■□□ 2.29
TBRG4-211ENST00000482482 SOGA1O94964 1423 aa29.34■■■□□ 2.29
TBRG4-211ENST00000482482 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
TBRG4-211ENST00000482482 FGD5Q6ZNL6 1462 aa29.3■■■□□ 2.28
TBRG4-211ENST00000482482 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
TBRG4-211ENST00000482482 OSCARQ8IYS5 282 aa29.3■■■□□ 2.28
TBRG4-211ENST00000482482 AQRO60306 1485 aaKnown RBP eCLIP29.28■■■□□ 2.283e-7■■■■■ 31.8
TBRG4-211ENST00000482482 EIF4G3O43432 1585 aaKnown RBP29.25■■■□□ 2.27
TBRG4-211ENST00000482482 TDRD9Q8NDG6 1382 aaKnown RBP29.2■■■□□ 2.26
TBRG4-211ENST00000482482 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
TBRG4-211ENST00000482482 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
TBRG4-211ENST00000482482 FBLN2P98095 1184 aa29.04■■■□□ 2.24
TBRG4-211ENST00000482482 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
TBRG4-211ENST00000482482 ABCA10Q8WWZ4 1543 aa29.01■■■□□ 2.23
TBRG4-211ENST00000482482 GRIN2BQ13224 1484 aa28.99■■■□□ 2.23
TBRG4-211ENST00000482482 BIVM-ERCC5R4GMW8 1640 aa28.99■■■□□ 2.23
TBRG4-211ENST00000482482 SYNJ1O43426 1573 aa28.99■■■□□ 2.23
TBRG4-211ENST00000482482 GAPVD1Q14C86 1478 aa28.97■■■□□ 2.23
TBRG4-211ENST00000482482 SNAPC4Q5SXM2 1469 aa28.97■■■□□ 2.23
TBRG4-211ENST00000482482 MAGI1Q96QZ7 1491 aaPredicted RBP28.92■■■□□ 2.22
TBRG4-211ENST00000482482 CHMP7Q8WUX9 453 aaPredicted RBP28.92■■■□□ 2.22
TBRG4-211ENST00000482482 CHD1O14646 1710 aa28.89■■■□□ 2.21
TBRG4-211ENST00000482482 ABCA5Q8WWZ7 1642 aa28.85■■■□□ 2.21
TBRG4-211ENST00000482482 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
TBRG4-211ENST00000482482 SYNJ2O15056 1496 aa28.82■■■□□ 2.2
TBRG4-211ENST00000482482 PBRM1Q86U86 1689 aa28.8■■■□□ 2.2
TBRG4-211ENST00000482482 ARHGEF11O15085 1522 aa28.72■■■□□ 2.19
TBRG4-211ENST00000482482 RIMBP3CA6NJZ7 1639 aa28.72■■■□□ 2.19
TBRG4-211ENST00000482482 RIMBP3BA6NNM3 1639 aa28.72■■■□□ 2.19
TBRG4-211ENST00000482482 RIMBP3Q9UFD9 1639 aa28.72■■■□□ 2.19
TBRG4-211ENST00000482482 ERICH3Q5RHP9 1530 aa28.65■■■□□ 2.18
TBRG4-211ENST00000482482 FHAD1B1AJZ9 1412 aa28.64■■■□□ 2.18
TBRG4-211ENST00000482482 CLASP1Q7Z460 1538 aa28.63■■■□□ 2.17
TBRG4-211ENST00000482482 GRIN2AQ12879 1464 aa28.6■■■□□ 2.17
TBRG4-211ENST00000482482 ADAMTS12P58397 1594 aa28.6■■■□□ 2.17
TBRG4-211ENST00000482482 CYB5RLQ6IPT4 315 aa28.57■■■□□ 2.16
TBRG4-211ENST00000482482 KIF27Q86VH2 1401 aa28.55■■■□□ 2.16
TBRG4-211ENST00000482482 NUP160Q12769 1436 aa28.49■■■□□ 2.15
TBRG4-211ENST00000482482 IGF1RP08069 1367 aa28.48■■■□□ 2.15
TBRG4-211ENST00000482482 ARAP1Q96P48 1450 aa28.46■■■□□ 2.15
TBRG4-211ENST00000482482 CEP170Q5SW79 1584 aa28.44■■■□□ 2.14
TBRG4-211ENST00000482482 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
TBRG4-211ENST00000482482 CUL7Q14999 1698 aa28.31■■■□□ 2.12
TBRG4-211ENST00000482482 JPH4Q96JJ6 628 aa28.28■■■□□ 2.12
TBRG4-211ENST00000482482 SHROOM2Q13796 1616 aa28.23■■■□□ 2.11
TBRG4-211ENST00000482482 ERCC6L2Q5T890 1561 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms