RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 NISCHQ9Y2I1 1504 aa38.65■■■■□ 3.78
COL16A1-212ENST00000482478 CCDC180Q9P1Z9 1646 aa34.6■■■■□ 3.13
COL16A1-212ENST00000482478 ABCC9O60706 1549 aa34.14■■■■□ 3.06
COL16A1-212ENST00000482478 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.83
COL16A1-212ENST00000482478 NACADO15069 1562 aa32.54■■■□□ 2.8
COL16A1-212ENST00000482478 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
COL16A1-212ENST00000482478 ZCCHC6Q5VYS8 1495 aaKnown RBP32.2■■■□□ 2.75
COL16A1-212ENST00000482478 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
COL16A1-212ENST00000482478 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.7
COL16A1-212ENST00000482478 UNC13AQ9UPW8 1703 aa31.94■■■□□ 2.7
COL16A1-212ENST00000482478 PABPN1Q86U42 306 aaKnown RBP eCLIP31.76■■■□□ 2.67
COL16A1-212ENST00000482478 BICRAQ9NZM4 1560 aa31.65■■■□□ 2.66
COL16A1-212ENST00000482478 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
COL16A1-212ENST00000482478 DNAJC5BQ9UF47 199 aa31.41■■■□□ 2.62
COL16A1-212ENST00000482478 SHROOM4Q9ULL8 1493 aa31.37■■■□□ 2.61
COL16A1-212ENST00000482478 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
COL16A1-212ENST00000482478 CC2D2AQ9P2K1 1620 aa30.86■■■□□ 2.53
COL16A1-212ENST00000482478 CECR2Q9BXF3 1484 aa30.7■■■□□ 2.51
COL16A1-212ENST00000482478 SMARCA4P51532 1647 aa30.13■■■□□ 2.41
COL16A1-212ENST00000482478 BAZ1AQ9NRL2 1556 aaPredicted RBP30.04■■■□□ 2.4
COL16A1-212ENST00000482478 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
COL16A1-212ENST00000482478 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
COL16A1-212ENST00000482478 NCAPD3P42695 1498 aa29.95■■■□□ 2.39
COL16A1-212ENST00000482478 HMGXB3Q12766 1538 aa29.91■■■□□ 2.38
COL16A1-212ENST00000482478 BAZ1BQ9UIG0 1483 aaKnown RBP29.8■■■□□ 2.36
COL16A1-212ENST00000482478 MROH2BQ7Z745 1585 aa29.79■■■□□ 2.36
COL16A1-212ENST00000482478 PEG3Q9GZU2 1588 aa29.78■■■□□ 2.36
COL16A1-212ENST00000482478 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
COL16A1-212ENST00000482478 WIZO95785 1651 aa29.49■■■□□ 2.31
COL16A1-212ENST00000482478 NESP48681 1621 aa29.42■■■□□ 2.3
COL16A1-212ENST00000482478 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
COL16A1-212ENST00000482478 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
COL16A1-212ENST00000482478 CUX2O14529 1486 aa29.24■■■□□ 2.27
COL16A1-212ENST00000482478 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.27
COL16A1-212ENST00000482478 KIF21AQ7Z4S6 1674 aa29.13■■■□□ 2.25
COL16A1-212ENST00000482478 THOC2Q8NI27 1593 aaKnown RBP29.12■■■□□ 2.25
COL16A1-212ENST00000482478 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
COL16A1-212ENST00000482478 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
COL16A1-212ENST00000482478 MRC2Q9UBG0 1479 aa28.88■■■□□ 2.21
COL16A1-212ENST00000482478 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
COL16A1-212ENST00000482478 CFTRP13569 1480 aa28.86■■■□□ 2.21
COL16A1-212ENST00000482478 FANCD2Q9BXW9 1451 aa28.84■■■□□ 2.21
COL16A1-212ENST00000482478 WDR62O43379 1518 aa28.8■■■□□ 2.2
COL16A1-212ENST00000482478 PRDM2Q13029 1718 aa28.75■■■□□ 2.19
COL16A1-212ENST00000482478 CCDC88BA6NC98 1476 aa28.75■■■□□ 2.19
COL16A1-212ENST00000482478 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
COL16A1-212ENST00000482478 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
COL16A1-212ENST00000482478 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.13
COL16A1-212ENST00000482478 TOPBP1Q92547 1522 aa28.33■■■□□ 2.13
COL16A1-212ENST00000482478 DNMBPQ6XZF7 1577 aa28.31■■■□□ 2.12
COL16A1-212ENST00000482478 ABCC8Q09428 1581 aa28.26■■■□□ 2.11
COL16A1-212ENST00000482478 IFT140Q96RY7 1462 aa28.23■■■□□ 2.11
COL16A1-212ENST00000482478 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
COL16A1-212ENST00000482478 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
COL16A1-212ENST00000482478 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
COL16A1-212ENST00000482478 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
COL16A1-212ENST00000482478 CUX1P39880 1505 aa28■■■□□ 2.07
COL16A1-212ENST00000482478 FGD5Q6ZNL6 1462 aa27.98■■■□□ 2.07
COL16A1-212ENST00000482478 RAD54L2Q9Y4B4 1467 aa27.94■■■□□ 2.06
COL16A1-212ENST00000482478 AQRO60306 1485 aaKnown RBP eCLIP27.89■■■□□ 2.05
COL16A1-212ENST00000482478 SOGA1O94964 1423 aa27.88■■■□□ 2.05
COL16A1-212ENST00000482478 OSCARQ8IYS5 282 aa27.84■■■□□ 2.05
COL16A1-212ENST00000482478 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
COL16A1-212ENST00000482478 CHD1O14646 1710 aa27.78■■■□□ 2.04
COL16A1-212ENST00000482478 TDRD9Q8NDG6 1382 aaKnown RBP27.77■■■□□ 2.04
COL16A1-212ENST00000482478 SNAPC4Q5SXM2 1469 aa27.72■■■□□ 2.03
COL16A1-212ENST00000482478 WRNQ14191 1432 aaPredicted RBP eCLIP27.7■■■□□ 2.03
COL16A1-212ENST00000482478 BIVM-ERCC5R4GMW8 1640 aa27.7■■■□□ 2.02
COL16A1-212ENST00000482478 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
COL16A1-212ENST00000482478 TOP2BQ02880 1626 aa27.68■■■□□ 2.02
COL16A1-212ENST00000482478 PBRM1Q86U86 1689 aa27.67■■■□□ 2.02
COL16A1-212ENST00000482478 GRIN2BQ13224 1484 aa27.65■■■□□ 2.02
COL16A1-212ENST00000482478 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
COL16A1-212ENST00000482478 FBLN2P98095 1184 aa27.64■■■□□ 2.02
COL16A1-212ENST00000482478 TRIM41Q8WV44 630 aa27.64■■■□□ 2.02
COL16A1-212ENST00000482478 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.01
COL16A1-212ENST00000482478 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
COL16A1-212ENST00000482478 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
COL16A1-212ENST00000482478 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
COL16A1-212ENST00000482478 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
COL16A1-212ENST00000482478 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
COL16A1-212ENST00000482478 ARHGEF11O15085 1522 aa27.55■■■□□ 2
COL16A1-212ENST00000482478 SYNJ2O15056 1496 aa27.53■■■□□ 2
COL16A1-212ENST00000482478 CHMP7Q8WUX9 453 aaPredicted RBP27.48■■□□□ 1.99
COL16A1-212ENST00000482478 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
COL16A1-212ENST00000482478 CLASP1Q7Z460 1538 aa27.43■■□□□ 1.98
COL16A1-212ENST00000482478 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
COL16A1-212ENST00000482478 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
COL16A1-212ENST00000482478 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
COL16A1-212ENST00000482478 FHAD1B1AJZ9 1412 aa27.27■■□□□ 1.96
COL16A1-212ENST00000482478 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
COL16A1-212ENST00000482478 CYB5RLQ6IPT4 315 aa27.19■■□□□ 1.94
COL16A1-212ENST00000482478 NUP160Q12769 1436 aa27.17■■□□□ 1.94
COL16A1-212ENST00000482478 KIF27Q86VH2 1401 aa27.15■■□□□ 1.94
COL16A1-212ENST00000482478 CUL7Q14999 1698 aa27.09■■□□□ 1.93
COL16A1-212ENST00000482478 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
COL16A1-212ENST00000482478 SHROOM2Q13796 1616 aa27.04■■□□□ 1.92
COL16A1-212ENST00000482478 ERCC6L2Q5T890 1561 aa27.01■■□□□ 1.92
COL16A1-212ENST00000482478 IGF1RP08069 1367 aa26.95■■□□□ 1.9
COL16A1-212ENST00000482478 PRG4Q92954 1404 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms