RNA–Protein interactions for RNA: ENST00000482397.1

GRB10-219, Transcript of growth factor receptor bound protein 10, humanhuman

TSL 4

Gene GRB10, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRB10-219ENST00000482397 NISCHQ9Y2I1 1504 aa30.18■■■□□ 2.42
GRB10-219ENST00000482397 ABCC9O60706 1549 aa27.78■■■□□ 2.04
GRB10-219ENST00000482397 CCDC180Q9P1Z9 1646 aa27.11■■□□□ 1.93
GRB10-219ENST00000482397 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.86
GRB10-219ENST00000482397 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
GRB10-219ENST00000482397 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.74
GRB10-219ENST00000482397 NACADO15069 1562 aa25.79■■□□□ 1.72
GRB10-219ENST00000482397 DCAF8L2P0C7V8 631 aa25.76■■□□□ 1.71
GRB10-219ENST00000482397 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
GRB10-219ENST00000482397 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
GRB10-219ENST00000482397 MYO15BQ96JP2 1530 aa25.27■■□□□ 1.64
GRB10-219ENST00000482397 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
GRB10-219ENST00000482397 CC2D2AQ9P2K1 1620 aa25■■□□□ 1.59
GRB10-219ENST00000482397 ZCCHC6Q5VYS8 1495 aaKnown RBP24.91■■□□□ 1.58
GRB10-219ENST00000482397 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
GRB10-219ENST00000482397 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
GRB10-219ENST00000482397 EIF4G1Q04637 1599 aaKnown RBP24.83■■□□□ 1.57
GRB10-219ENST00000482397 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
GRB10-219ENST00000482397 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
GRB10-219ENST00000482397 CUX2O14529 1486 aa23.99■■□□□ 1.43
GRB10-219ENST00000482397 NCAPD3P42695 1498 aa23.91■■□□□ 1.42
GRB10-219ENST00000482397 ERCC6Q03468 1493 aa23.91■■□□□ 1.42
GRB10-219ENST00000482397 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
GRB10-219ENST00000482397 NESP48681 1621 aa23.78■■□□□ 1.4
GRB10-219ENST00000482397 HMGXB3Q12766 1538 aa23.61■■□□□ 1.37
GRB10-219ENST00000482397 SMARCA4P51532 1647 aa23.6■■□□□ 1.37
GRB10-219ENST00000482397 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
GRB10-219ENST00000482397 THOC2Q8NI27 1593 aaKnown RBP23.5■■□□□ 1.35
GRB10-219ENST00000482397 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
GRB10-219ENST00000482397 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
GRB10-219ENST00000482397 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
GRB10-219ENST00000482397 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
GRB10-219ENST00000482397 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
GRB10-219ENST00000482397 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
GRB10-219ENST00000482397 KIF21AQ7Z4S6 1674 aa23.31■■□□□ 1.32
GRB10-219ENST00000482397 PDS5BQ9NTI5 1447 aa23.26■■□□□ 1.31
GRB10-219ENST00000482397 CADPSQ9ULU8 1353 aa23.17■■□□□ 1.3
GRB10-219ENST00000482397 MRC2Q9UBG0 1479 aa23.11■■□□□ 1.29
GRB10-219ENST00000482397 WDR62O43379 1518 aa23.08■■□□□ 1.28
GRB10-219ENST00000482397 WIZO95785 1651 aa22.97■■□□□ 1.27
GRB10-219ENST00000482397 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
GRB10-219ENST00000482397 FANCD2Q9BXW9 1451 aa22.9■■□□□ 1.26
GRB10-219ENST00000482397 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
GRB10-219ENST00000482397 CFTRP13569 1480 aa22.81■■□□□ 1.24
GRB10-219ENST00000482397 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
GRB10-219ENST00000482397 RSF1Q96T23 1441 aaPredicted RBP22.67■■□□□ 1.22
GRB10-219ENST00000482397 RIMBP3CA6NJZ7 1639 aa22.63■■□□□ 1.21
GRB10-219ENST00000482397 RIMBP3BA6NNM3 1639 aa22.63■■□□□ 1.21
GRB10-219ENST00000482397 RIMBP3Q9UFD9 1639 aa22.63■■□□□ 1.21
GRB10-219ENST00000482397 ZNF608Q9ULD9 1512 aaPredicted RBP22.62■■□□□ 1.21
GRB10-219ENST00000482397 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
GRB10-219ENST00000482397 ARHGEF11O15085 1522 aa22.53■■□□□ 1.2
GRB10-219ENST00000482397 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
GRB10-219ENST00000482397 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
GRB10-219ENST00000482397 CCDC88BA6NC98 1476 aa22.44■■□□□ 1.18
GRB10-219ENST00000482397 TOPBP1Q92547 1522 aa22.42■■□□□ 1.18
GRB10-219ENST00000482397 AQRO60306 1485 aaKnown RBP eCLIP22.35■■□□□ 1.17
GRB10-219ENST00000482397 EIF4G3O43432 1585 aaKnown RBP22.34■■□□□ 1.17
GRB10-219ENST00000482397 PRDM2Q13029 1718 aa22.33■■□□□ 1.17
GRB10-219ENST00000482397 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
GRB10-219ENST00000482397 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
GRB10-219ENST00000482397 FBLN2P98095 1184 aa22.26■■□□□ 1.15
GRB10-219ENST00000482397 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
GRB10-219ENST00000482397 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
GRB10-219ENST00000482397 CHD1O14646 1710 aa22.23■■□□□ 1.15
GRB10-219ENST00000482397 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
GRB10-219ENST00000482397 POLA1P09884 1462 aaPredicted RBP22.18■■□□□ 1.14
GRB10-219ENST00000482397 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
GRB10-219ENST00000482397 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
GRB10-219ENST00000482397 SOGA1O94964 1423 aa22.07■■□□□ 1.12
GRB10-219ENST00000482397 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
GRB10-219ENST00000482397 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
GRB10-219ENST00000482397 CHMP7Q8WUX9 453 aaPredicted RBP21.98■■□□□ 1.11
GRB10-219ENST00000482397 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
GRB10-219ENST00000482397 CUX1P39880 1505 aa21.9■■□□□ 1.1
GRB10-219ENST00000482397 AEBP2Q6ZN18 517 aaPredicted RBP21.9■■□□□ 1.1
GRB10-219ENST00000482397 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.09
GRB10-219ENST00000482397 SYNJ1O43426 1573 aa21.88■■□□□ 1.09
GRB10-219ENST00000482397 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
GRB10-219ENST00000482397 SYNJ2O15056 1496 aa21.86■■□□□ 1.09
GRB10-219ENST00000482397 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
GRB10-219ENST00000482397 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
GRB10-219ENST00000482397 ERCC6L2Q5T890 1561 aa21.78■■□□□ 1.08
GRB10-219ENST00000482397 PBRM1Q86U86 1689 aa21.69■■□□□ 1.06
GRB10-219ENST00000482397 ABCA10Q8WWZ4 1543 aa21.66■■□□□ 1.06
GRB10-219ENST00000482397 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
GRB10-219ENST00000482397 GRIN2AQ12879 1464 aa21.62■■□□□ 1.05
GRB10-219ENST00000482397 CEP170Q5SW79 1584 aa21.6■■□□□ 1.05
GRB10-219ENST00000482397 NUP160Q12769 1436 aa21.58■■□□□ 1.05
GRB10-219ENST00000482397 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
GRB10-219ENST00000482397 SHROOM2Q13796 1616 aa21.48■■□□□ 1.03
GRB10-219ENST00000482397 WRNQ14191 1432 aaPredicted RBP eCLIP21.47■■□□□ 1.03
GRB10-219ENST00000482397 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
GRB10-219ENST00000482397 PRG4Q92954 1404 aaPredicted RBP21.43■■□□□ 1.02
GRB10-219ENST00000482397 KIF13AQ9H1H9 1805 aa21.42■■□□□ 1.02
GRB10-219ENST00000482397 JPH4Q96JJ6 628 aa21.39■■□□□ 1.01
GRB10-219ENST00000482397 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
GRB10-219ENST00000482397 FAM69CQ0P6D2 419 aa21.37■■□□□ 1.01
GRB10-219ENST00000482397 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
GRB10-219ENST00000482397 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms