RNA–Protein interactions for RNA: ENST00000482396.5

SFMBT1-204, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-204ENST00000482396 NISCHQ9Y2I1 1504 aa48.81■■■■■ 5.4
SFMBT1-204ENST00000482396 CCDC180Q9P1Z9 1646 aa43.49■■■■■ 4.55
SFMBT1-204ENST00000482396 ABCC9O60706 1549 aa42.67■■■■■ 4.42
SFMBT1-204ENST00000482396 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
SFMBT1-204ENST00000482396 NACADO15069 1562 aa40.87■■■■■ 4.13
SFMBT1-204ENST00000482396 DCAF8L2P0C7V8 631 aa40.7■■■■■ 4.11
SFMBT1-204ENST00000482396 ZCCHC6Q5VYS8 1495 aaKnown RBP40.63■■■■■ 4.09
SFMBT1-204ENST00000482396 MYO15BQ96JP2 1530 aa40.6■■■■■ 4.09
SFMBT1-204ENST00000482396 DCAF1Q9Y4B6 1507 aa40.37■■■■■ 4.05
SFMBT1-204ENST00000482396 UNC13AQ9UPW8 1703 aa40.23■■■■■ 4.03
SFMBT1-204ENST00000482396 BICRAQ9NZM4 1560 aa39.87■■■■□ 3.97
SFMBT1-204ENST00000482396 PABPN1Q86U42 306 aaKnown RBP eCLIP39.83■■■■□ 3.97
SFMBT1-204ENST00000482396 SCRIBQ14160 1630 aa39.64■■■■□ 3.94
SFMBT1-204ENST00000482396 DNAJC5BQ9UF47 199 aa39.43■■■■□ 3.9
SFMBT1-204ENST00000482396 SHROOM4Q9ULL8 1493 aa39.26■■■■□ 3.88
SFMBT1-204ENST00000482396 EIF4G1Q04637 1599 aaKnown RBP38.74■■■■□ 3.79
SFMBT1-204ENST00000482396 CC2D2AQ9P2K1 1620 aa38.64■■■■□ 3.78
SFMBT1-204ENST00000482396 CECR2Q9BXF3 1484 aa38.34■■■■□ 3.73
SFMBT1-204ENST00000482396 SMARCA4P51532 1647 aa37.93■■■■□ 3.66
SFMBT1-204ENST00000482396 BAZ1AQ9NRL2 1556 aaPredicted RBP37.79■■■■□ 3.64
SFMBT1-204ENST00000482396 NCAPD3P42695 1498 aa37.75■■■■□ 3.63
SFMBT1-204ENST00000482396 ATAD2BQ9ULI0 1458 aa37.74■■■■□ 3.63
SFMBT1-204ENST00000482396 MROH2BQ7Z745 1585 aa37.65■■■■□ 3.62
SFMBT1-204ENST00000482396 SMARCA2P51531 1590 aa37.63■■■■□ 3.62
SFMBT1-204ENST00000482396 PEG3Q9GZU2 1588 aa37.57■■■■□ 3.6
SFMBT1-204ENST00000482396 HMGXB3Q12766 1538 aa37.53■■■■□ 3.6
SFMBT1-204ENST00000482396 BAZ1BQ9UIG0 1483 aaKnown RBP37.36■■■■□ 3.57
SFMBT1-204ENST00000482396 WIZO95785 1651 aa37.25■■■■□ 3.55
SFMBT1-204ENST00000482396 RSF1Q96T23 1441 aaPredicted RBP37.12■■■■□ 3.53
SFMBT1-204ENST00000482396 NESP48681 1621 aa36.93■■■■□ 3.5
SFMBT1-204ENST00000482396 TOP2AP11388 1531 aaKnown RBP36.78■■■■□ 3.48
SFMBT1-204ENST00000482396 LAMC3Q9Y6N6 1575 aa36.76■■■■□ 3.48
SFMBT1-204ENST00000482396 ERCC6Q03468 1493 aa36.69■■■■□ 3.46
SFMBT1-204ENST00000482396 CADPSQ9ULU8 1353 aa36.6■■■■□ 3.45
SFMBT1-204ENST00000482396 KIF21AQ7Z4S6 1674 aa36.53■■■■□ 3.44
SFMBT1-204ENST00000482396 PDS5BQ9NTI5 1447 aa36.44■■■■□ 3.42
SFMBT1-204ENST00000482396 CUX2O14529 1486 aa36.43■■■■□ 3.42
SFMBT1-204ENST00000482396 THOC2Q8NI27 1593 aaKnown RBP36.43■■■■□ 3.42
SFMBT1-204ENST00000482396 CFTRP13569 1480 aa36.37■■■■□ 3.41
SFMBT1-204ENST00000482396 CCDC88BA6NC98 1476 aa36.37■■■■□ 3.41
SFMBT1-204ENST00000482396 FANCD2Q9BXW9 1451 aa36.18■■■■□ 3.38
SFMBT1-204ENST00000482396 PRDM2Q13029 1718 aa36.17■■■■□ 3.38
SFMBT1-204ENST00000482396 MRC2Q9UBG0 1479 aa36.13■■■■□ 3.37
SFMBT1-204ENST00000482396 CEP164Q9UPV0 1460 aa36.12■■■■□ 3.37
SFMBT1-204ENST00000482396 WDR62O43379 1518 aa36.07■■■■□ 3.36
SFMBT1-204ENST00000482396 SUPT5HO00267 1087 aaKnown RBP35.94■■■■□ 3.34
SFMBT1-204ENST00000482396 URB2Q14146 1524 aaKnown RBP35.89■■■■□ 3.34
SFMBT1-204ENST00000482396 TOPBP1Q92547 1522 aa35.62■■■■□ 3.29
SFMBT1-204ENST00000482396 DNAJC5Q9H3Z4 198 aa35.55■■■■□ 3.28
SFMBT1-204ENST00000482396 DNMBPQ6XZF7 1577 aa35.55■■■■□ 3.28
SFMBT1-204ENST00000482396 ABCC8Q09428 1581 aa35.52■■■■□ 3.28
SFMBT1-204ENST00000482396 IFT140Q96RY7 1462 aa35.38■■■■□ 3.25
SFMBT1-204ENST00000482396 CUX1P39880 1505 aa35.32■■■■□ 3.24
SFMBT1-204ENST00000482396 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.24
SFMBT1-204ENST00000482396 TARBP1Q13395 1621 aaKnown RBP35.31■■■■□ 3.24
SFMBT1-204ENST00000482396 POLA1P09884 1462 aaPredicted RBP35.3■■■■□ 3.24
SFMBT1-204ENST00000482396 FGD5Q6ZNL6 1462 aa35.18■■■■□ 3.22
SFMBT1-204ENST00000482396 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
SFMBT1-204ENST00000482396 EIF4G3O43432 1585 aaKnown RBP35.16■■■■□ 3.22
SFMBT1-204ENST00000482396 SOGA1O94964 1423 aa35.11■■■■□ 3.21
SFMBT1-204ENST00000482396 AQRO60306 1485 aaKnown RBP eCLIP35.07■■■■□ 3.2
SFMBT1-204ENST00000482396 WDR97A6NE52 1622 aa35■■■■□ 3.19
SFMBT1-204ENST00000482396 BIVM-ERCC5R4GMW8 1640 aa34.98■■■■□ 3.19
SFMBT1-204ENST00000482396 SYNJ1O43426 1573 aa34.96■■■■□ 3.19
SFMBT1-204ENST00000482396 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
SFMBT1-204ENST00000482396 TOP2BQ02880 1626 aa34.95■■■■□ 3.18
SFMBT1-204ENST00000482396 WRNQ14191 1432 aaPredicted RBP eCLIP34.94■■■■□ 3.18
SFMBT1-204ENST00000482396 OSCARQ8IYS5 282 aa34.85■■■■□ 3.17
SFMBT1-204ENST00000482396 ABCA10Q8WWZ4 1543 aa34.83■■■■□ 3.17
SFMBT1-204ENST00000482396 CHD1O14646 1710 aa34.81■■■■□ 3.16
SFMBT1-204ENST00000482396 ABCA5Q8WWZ7 1642 aa34.76■■■■□ 3.15
SFMBT1-204ENST00000482396 PBRM1Q86U86 1689 aa34.73■■■■□ 3.15
SFMBT1-204ENST00000482396 GRIN2BQ13224 1484 aa34.71■■■■□ 3.15
SFMBT1-204ENST00000482396 SNAPC4Q5SXM2 1469 aa34.71■■■■□ 3.15
SFMBT1-204ENST00000482396 GAPVD1Q14C86 1478 aa34.71■■■■□ 3.15
SFMBT1-204ENST00000482396 MAGI1Q96QZ7 1491 aaPredicted RBP34.64■■■■□ 3.14
SFMBT1-204ENST00000482396 FBLN2P98095 1184 aa34.55■■■■□ 3.12
SFMBT1-204ENST00000482396 SYNJ2O15056 1496 aa34.52■■■■□ 3.12
SFMBT1-204ENST00000482396 CHMP7Q8WUX9 453 aaPredicted RBP34.44■■■■□ 3.1
SFMBT1-204ENST00000482396 RIMBP3CA6NJZ7 1639 aa34.44■■■■□ 3.1
SFMBT1-204ENST00000482396 RIMBP3BA6NNM3 1639 aa34.44■■■■□ 3.1
SFMBT1-204ENST00000482396 RIMBP3Q9UFD9 1639 aa34.44■■■■□ 3.1
SFMBT1-204ENST00000482396 ADAMTS12P58397 1594 aa34.41■■■■□ 3.1
SFMBT1-204ENST00000482396 ERICH3Q5RHP9 1530 aa34.4■■■■□ 3.1
SFMBT1-204ENST00000482396 CLASP1Q7Z460 1538 aa34.4■■■■□ 3.1
SFMBT1-204ENST00000482396 ARHGEF11O15085 1522 aa34.36■■■■□ 3.09
SFMBT1-204ENST00000482396 GRIN2AQ12879 1464 aa34.29■■■■□ 3.08
SFMBT1-204ENST00000482396 FHAD1B1AJZ9 1412 aa34.28■■■■□ 3.08
SFMBT1-204ENST00000482396 TRIM41Q8WV44 630 aa34.23■■■■□ 3.07
SFMBT1-204ENST00000482396 CEP170Q5SW79 1584 aa34.19■■■■□ 3.06
SFMBT1-204ENST00000482396 KIF27Q86VH2 1401 aa34.19■■■■□ 3.06
SFMBT1-204ENST00000482396 NUP160Q12769 1436 aa34.17■■■■□ 3.06
SFMBT1-204ENST00000482396 IGF1RP08069 1367 aa34.15■■■■□ 3.06
SFMBT1-204ENST00000482396 ARAP1Q96P48 1450 aa34.1■■■■□ 3.05
SFMBT1-204ENST00000482396 CUL7Q14999 1698 aa34.06■■■■□ 3.04
SFMBT1-204ENST00000482396 CYB5RLQ6IPT4 315 aa34■■■■□ 3.03
SFMBT1-204ENST00000482396 SHROOM2Q13796 1616 aa33.99■■■■□ 3.03
SFMBT1-204ENST00000482396 RUSC2Q8N2Y8 1516 aa33.99■■■■□ 3.03
SFMBT1-204ENST00000482396 ERCC6L2Q5T890 1561 aa33.95■■■■□ 3.03
SFMBT1-204ENST00000482396 CARMIL1Q5VZK9 1371 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms