RNA–Protein interactions for RNA: ENST00000482367.1

PPM1J-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1J, humanhuman

TSL 5

Gene PPM1J, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1J-204ENST00000482367 NISCHQ9Y2I1 1504 aa50.73■■■■■ 5.71
PPM1J-204ENST00000482367 CCDC180Q9P1Z9 1646 aa45.4■■■■■ 4.86
PPM1J-204ENST00000482367 ABCC9O60706 1549 aa45.17■■■■■ 4.82
PPM1J-204ENST00000482367 RB1CC1Q8TDY2 1594 aa43.07■■■■■ 4.48
PPM1J-204ENST00000482367 DCAF8L2P0C7V8 631 aa42.87■■■■■ 4.45
PPM1J-204ENST00000482367 NACADO15069 1562 aa42.8■■■■■ 4.44
PPM1J-204ENST00000482367 MYO15BQ96JP2 1530 aa42.2■■■■■ 4.35
PPM1J-204ENST00000482367 UNC13AQ9UPW8 1703 aa42.17■■■■■ 4.34
PPM1J-204ENST00000482367 ZCCHC6Q5VYS8 1495 aaKnown RBP42.12■■■■■ 4.33
PPM1J-204ENST00000482367 PABPN1Q86U42 306 aaKnown RBP eCLIP42.1■■■■■ 4.33
PPM1J-204ENST00000482367 DNAJC5BQ9UF47 199 aa41.95■■■■■ 4.31
PPM1J-204ENST00000482367 DCAF1Q9Y4B6 1507 aa41.84■■■■■ 4.29
PPM1J-204ENST00000482367 BICRAQ9NZM4 1560 aa41.77■■■■■ 4.28
PPM1J-204ENST00000482367 SCRIBQ14160 1630 aa41.53■■■■■ 4.24
PPM1J-204ENST00000482367 SHROOM4Q9ULL8 1493 aa41.15■■■■■ 4.18
PPM1J-204ENST00000482367 CC2D2AQ9P2K1 1620 aa40.78■■■■■ 4.12
PPM1J-204ENST00000482367 EIF4G1Q04637 1599 aaKnown RBP40.75■■■■■ 4.11
PPM1J-204ENST00000482367 CECR2Q9BXF3 1484 aa40.6■■■■■ 4.09
PPM1J-204ENST00000482367 SMARCA4P51532 1647 aa39.55■■■■□ 3.92
PPM1J-204ENST00000482367 NCAPD3P42695 1498 aa39.46■■■■□ 3.91
PPM1J-204ENST00000482367 ATAD2BQ9ULI0 1458 aa39.45■■■■□ 3.91
PPM1J-204ENST00000482367 SMARCA2P51531 1590 aa39.38■■■■□ 3.9
PPM1J-204ENST00000482367 BAZ1AQ9NRL2 1556 aaPredicted RBP39.38■■■■□ 3.9
PPM1J-204ENST00000482367 HMGXB3Q12766 1538 aa39.25■■■■□ 3.87
PPM1J-204ENST00000482367 BAZ1BQ9UIG0 1483 aaKnown RBP39.17■■■■□ 3.86
PPM1J-204ENST00000482367 MROH2BQ7Z745 1585 aa39.14■■■■□ 3.86
PPM1J-204ENST00000482367 PEG3Q9GZU2 1588 aa39.06■■■■□ 3.84
PPM1J-204ENST00000482367 ERCC6Q03468 1493 aa39■■■■□ 3.83
PPM1J-204ENST00000482367 NESP48681 1621 aa38.89■■■■□ 3.82
PPM1J-204ENST00000482367 WIZO95785 1651 aa38.74■■■■□ 3.79
PPM1J-204ENST00000482367 CUX2O14529 1486 aa38.67■■■■□ 3.78
PPM1J-204ENST00000482367 LAMC3Q9Y6N6 1575 aa38.6■■■■□ 3.77
PPM1J-204ENST00000482367 KIF21AQ7Z4S6 1674 aa38.43■■■■□ 3.74
PPM1J-204ENST00000482367 RSF1Q96T23 1441 aaPredicted RBP38.41■■■■□ 3.74
PPM1J-204ENST00000482367 THOC2Q8NI27 1593 aaKnown RBP38.39■■■■□ 3.74
PPM1J-204ENST00000482367 PDS5BQ9NTI5 1447 aa38.36■■■■□ 3.73
PPM1J-204ENST00000482367 CADPSQ9ULU8 1353 aa38.32■■■■□ 3.73
PPM1J-204ENST00000482367 DNAJC5Q9H3Z4 198 aa38.24■■■■□ 3.71
PPM1J-204ENST00000482367 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
PPM1J-204ENST00000482367 MRC2Q9UBG0 1479 aa38.04■■■■□ 3.68
PPM1J-204ENST00000482367 CEP164Q9UPV0 1460 aa37.99■■■■□ 3.67
PPM1J-204ENST00000482367 FANCD2Q9BXW9 1451 aa37.96■■■■□ 3.67
PPM1J-204ENST00000482367 CFTRP13569 1480 aa37.95■■■■□ 3.67
PPM1J-204ENST00000482367 WDR62O43379 1518 aa37.91■■■■□ 3.66
PPM1J-204ENST00000482367 CCDC88BA6NC98 1476 aa37.77■■■■□ 3.64
PPM1J-204ENST00000482367 PRDM2Q13029 1718 aa37.73■■■■□ 3.63
PPM1J-204ENST00000482367 URB2Q14146 1524 aaKnown RBP37.61■■■■□ 3.61
PPM1J-204ENST00000482367 TOPBP1Q92547 1522 aa37.27■■■■□ 3.56
PPM1J-204ENST00000482367 DNMBPQ6XZF7 1577 aa37.17■■■■□ 3.54
PPM1J-204ENST00000482367 IFT140Q96RY7 1462 aa37.16■■■■□ 3.54
PPM1J-204ENST00000482367 ABCC8Q09428 1581 aa37.14■■■■□ 3.54
PPM1J-204ENST00000482367 SUPT5HO00267 1087 aaKnown RBP37.14■■■■□ 3.54
PPM1J-204ENST00000482367 ZNF608Q9ULD9 1512 aaPredicted RBP37.11■■■■□ 3.53
PPM1J-204ENST00000482367 OSCARQ8IYS5 282 aa36.98■■■■□ 3.51
PPM1J-204ENST00000482367 EIF4G3O43432 1585 aaKnown RBP36.96■■■■□ 3.51
PPM1J-204ENST00000482367 TRIM41Q8WV44 630 aa36.92■■■■□ 3.5
PPM1J-204ENST00000482367 POLA1P09884 1462 aaPredicted RBP36.91■■■■□ 3.5
PPM1J-204ENST00000482367 TARBP1Q13395 1621 aaKnown RBP36.89■■■■□ 3.5
PPM1J-204ENST00000482367 AQRO60306 1485 aaKnown RBP eCLIP36.82■■■■□ 3.486e-6■■■■□ 25.1
PPM1J-204ENST00000482367 RAD54L2Q9Y4B4 1467 aa36.81■■■■□ 3.48
PPM1J-204ENST00000482367 CUX1P39880 1505 aa36.76■■■■□ 3.48
PPM1J-204ENST00000482367 FGD5Q6ZNL6 1462 aa36.75■■■■□ 3.47
PPM1J-204ENST00000482367 SOGA1O94964 1423 aa36.74■■■■□ 3.47
PPM1J-204ENST00000482367 CHD1O14646 1710 aa36.67■■■■□ 3.46
PPM1J-204ENST00000482367 TDRD9Q8NDG6 1382 aaKnown RBP36.66■■■■□ 3.46
PPM1J-204ENST00000482367 FBLN2P98095 1184 aa36.61■■■■□ 3.45
PPM1J-204ENST00000482367 RIMBP3CA6NJZ7 1639 aa36.54■■■■□ 3.44
PPM1J-204ENST00000482367 RIMBP3BA6NNM3 1639 aa36.54■■■■□ 3.44
PPM1J-204ENST00000482367 RIMBP3Q9UFD9 1639 aa36.54■■■■□ 3.44
PPM1J-204ENST00000482367 SNAPC4Q5SXM2 1469 aa36.49■■■■□ 3.43
PPM1J-204ENST00000482367 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
PPM1J-204ENST00000482367 ARHGEF11O15085 1522 aa36.44■■■■□ 3.42
PPM1J-204ENST00000482367 GRIN2BQ13224 1484 aa36.38■■■■□ 3.41
PPM1J-204ENST00000482367 PBRM1Q86U86 1689 aa36.36■■■■□ 3.41
PPM1J-204ENST00000482367 MAGI1Q96QZ7 1491 aaPredicted RBP36.33■■■■□ 3.41
PPM1J-204ENST00000482367 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
PPM1J-204ENST00000482367 CHMP7Q8WUX9 453 aaPredicted RBP36.31■■■■□ 3.4
PPM1J-204ENST00000482367 ABCA10Q8WWZ4 1543 aa36.29■■■■□ 3.4
PPM1J-204ENST00000482367 WRNQ14191 1432 aaPredicted RBP eCLIP36.28■■■■□ 3.4
PPM1J-204ENST00000482367 SYNJ1O43426 1573 aa36.27■■■■□ 3.4
PPM1J-204ENST00000482367 BIVM-ERCC5R4GMW8 1640 aa36.26■■■■□ 3.39
PPM1J-204ENST00000482367 TOP2BQ02880 1626 aa36.25■■■■□ 3.39
PPM1J-204ENST00000482367 ABCA5Q8WWZ7 1642 aa36.25■■■■□ 3.39
PPM1J-204ENST00000482367 SYNJ2O15056 1496 aa36.22■■■■□ 3.39
PPM1J-204ENST00000482367 CYB5RLQ6IPT4 315 aa36.18■■■■□ 3.38
PPM1J-204ENST00000482367 CLASP1Q7Z460 1538 aa36.13■■■■□ 3.38
PPM1J-204ENST00000482367 ARAP1Q96P48 1450 aa36.1■■■■□ 3.37
PPM1J-204ENST00000482367 ADAMTS12P58397 1594 aa35.98■■■■□ 3.35
PPM1J-204ENST00000482367 GRIN2AQ12879 1464 aa35.92■■■■□ 3.34
PPM1J-204ENST00000482367 ERICH3Q5RHP9 1530 aa35.85■■■■□ 3.33
PPM1J-204ENST00000482367 FHAD1B1AJZ9 1412 aa35.83■■■■□ 3.33
PPM1J-204ENST00000482367 CEP170Q5SW79 1584 aa35.81■■■■□ 3.32
PPM1J-204ENST00000482367 TRHP20396 242 aaPredicted RBP35.74■■■■□ 3.31
PPM1J-204ENST00000482367 NUP160Q12769 1436 aa35.74■■■■□ 3.31
PPM1J-204ENST00000482367 ERCC6L2Q5T890 1561 aa35.67■■■■□ 3.3
PPM1J-204ENST00000482367 SHROOM2Q13796 1616 aa35.56■■■■□ 3.28
PPM1J-204ENST00000482367 KIF27Q86VH2 1401 aa35.56■■■■□ 3.28
PPM1J-204ENST00000482367 RUSC2Q8N2Y8 1516 aa35.47■■■■□ 3.27
PPM1J-204ENST00000482367 CUL7Q14999 1698 aa35.45■■■■□ 3.27
PPM1J-204ENST00000482367 IGF1RP08069 1367 aa35.44■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms