RNA–Protein interactions for RNA: ENST00000482331.1

HTRA2-208, Transcript of HtrA serine peptidase 2, humanhuman

TSL 1 (best)

Gene HTRA2, Length 980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA2-208ENST00000482331 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
HTRA2-208ENST00000482331 CCDC180Q9P1Z9 1646 aa25.85■■□□□ 1.73
HTRA2-208ENST00000482331 ABCC9O60706 1549 aa25.56■■□□□ 1.68
HTRA2-208ENST00000482331 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
HTRA2-208ENST00000482331 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
HTRA2-208ENST00000482331 NACADO15069 1562 aa24.34■■□□□ 1.49
HTRA2-208ENST00000482331 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
HTRA2-208ENST00000482331 MYO15BQ96JP2 1530 aa24.08■■□□□ 1.45
HTRA2-208ENST00000482331 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
HTRA2-208ENST00000482331 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
HTRA2-208ENST00000482331 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.41
HTRA2-208ENST00000482331 BICRAQ9NZM4 1560 aa23.71■■□□□ 1.39
HTRA2-208ENST00000482331 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
HTRA2-208ENST00000482331 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
HTRA2-208ENST00000482331 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
HTRA2-208ENST00000482331 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
HTRA2-208ENST00000482331 CC2D2AQ9P2K1 1620 aa23.08■■□□□ 1.29
HTRA2-208ENST00000482331 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
HTRA2-208ENST00000482331 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
HTRA2-208ENST00000482331 BAZ1AQ9NRL2 1556 aaPredicted RBP22.5■■□□□ 1.19
HTRA2-208ENST00000482331 ATAD2BQ9ULI0 1458 aa22.47■■□□□ 1.19
HTRA2-208ENST00000482331 NCAPD3P42695 1498 aa22.47■■□□□ 1.19
HTRA2-208ENST00000482331 SMARCA2P51531 1590 aa22.42■■□□□ 1.18
HTRA2-208ENST00000482331 MROH2BQ7Z745 1585 aa22.39■■□□□ 1.18
HTRA2-208ENST00000482331 HMGXB3Q12766 1538 aa22.32■■□□□ 1.16
HTRA2-208ENST00000482331 BAZ1BQ9UIG0 1483 aaKnown RBP22.29■■□□□ 1.16
HTRA2-208ENST00000482331 PEG3Q9GZU2 1588 aa22.29■■□□□ 1.16
HTRA2-208ENST00000482331 WIZO95785 1651 aa22.17■■□□□ 1.14
HTRA2-208ENST00000482331 NESP48681 1621 aa22.06■■□□□ 1.12
HTRA2-208ENST00000482331 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
HTRA2-208ENST00000482331 ERCC6Q03468 1493 aa22.03■■□□□ 1.12
HTRA2-208ENST00000482331 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
HTRA2-208ENST00000482331 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
HTRA2-208ENST00000482331 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
HTRA2-208ENST00000482331 KIF21AQ7Z4S6 1674 aa21.8■■□□□ 1.08
HTRA2-208ENST00000482331 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
HTRA2-208ENST00000482331 CUX2O14529 1486 aa21.78■■□□□ 1.08
HTRA2-208ENST00000482331 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
HTRA2-208ENST00000482331 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
HTRA2-208ENST00000482331 CFTRP13569 1480 aa21.64■■□□□ 1.06
HTRA2-208ENST00000482331 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
HTRA2-208ENST00000482331 CEP164Q9UPV0 1460 aa21.58■■□□□ 1.04
HTRA2-208ENST00000482331 MRC2Q9UBG0 1479 aa21.57■■□□□ 1.04
HTRA2-208ENST00000482331 WDR62O43379 1518 aa21.5■■□□□ 1.03
HTRA2-208ENST00000482331 PRDM2Q13029 1718 aa21.49■■□□□ 1.03
HTRA2-208ENST00000482331 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
HTRA2-208ENST00000482331 DNAJC5Q9H3Z4 198 aa21.39■■□□□ 1.01
HTRA2-208ENST00000482331 URB2Q14146 1524 aaKnown RBP21.39■■□□□ 1.01
HTRA2-208ENST00000482331 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
HTRA2-208ENST00000482331 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
HTRA2-208ENST00000482331 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
HTRA2-208ENST00000482331 IFT140Q96RY7 1462 aa21.11■□□□□ 0.97
HTRA2-208ENST00000482331 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.96
HTRA2-208ENST00000482331 POLA1P09884 1462 aaPredicted RBP21.02■□□□□ 0.96
HTRA2-208ENST00000482331 CUX1P39880 1505 aa21■□□□□ 0.95
HTRA2-208ENST00000482331 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
HTRA2-208ENST00000482331 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
HTRA2-208ENST00000482331 SOGA1O94964 1423 aa20.97■□□□□ 0.95
HTRA2-208ENST00000482331 FGD5Q6ZNL6 1462 aa20.97■□□□□ 0.95
HTRA2-208ENST00000482331 EIF4G3O43432 1585 aaKnown RBP20.97■□□□□ 0.95
HTRA2-208ENST00000482331 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.942e-9■■■■□ 21.4
HTRA2-208ENST00000482331 OSCARQ8IYS5 282 aa20.93■□□□□ 0.94
HTRA2-208ENST00000482331 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
HTRA2-208ENST00000482331 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
HTRA2-208ENST00000482331 FBLN2P98095 1184 aa20.8■□□□□ 0.92
HTRA2-208ENST00000482331 CHD1O14646 1710 aa20.78■□□□□ 0.92
HTRA2-208ENST00000482331 SYNJ1O43426 1573 aa20.78■□□□□ 0.92
HTRA2-208ENST00000482331 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
HTRA2-208ENST00000482331 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
HTRA2-208ENST00000482331 BIVM-ERCC5R4GMW8 1640 aa20.76■□□□□ 0.91
HTRA2-208ENST00000482331 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
HTRA2-208ENST00000482331 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
HTRA2-208ENST00000482331 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
HTRA2-208ENST00000482331 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
HTRA2-208ENST00000482331 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
HTRA2-208ENST00000482331 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
HTRA2-208ENST00000482331 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
HTRA2-208ENST00000482331 ABCA5Q8WWZ7 1642 aa20.66■□□□□ 0.9
HTRA2-208ENST00000482331 MAGI1Q96QZ7 1491 aaPredicted RBP20.65■□□□□ 0.9
HTRA2-208ENST00000482331 RIMBP3CA6NJZ7 1639 aa20.6■□□□□ 0.89
HTRA2-208ENST00000482331 RIMBP3BA6NNM3 1639 aa20.6■□□□□ 0.89
HTRA2-208ENST00000482331 RIMBP3Q9UFD9 1639 aa20.6■□□□□ 0.89
HTRA2-208ENST00000482331 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
HTRA2-208ENST00000482331 ARHGEF11O15085 1522 aa20.56■□□□□ 0.88
HTRA2-208ENST00000482331 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
HTRA2-208ENST00000482331 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
HTRA2-208ENST00000482331 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
HTRA2-208ENST00000482331 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
HTRA2-208ENST00000482331 GRIN2AQ12879 1464 aa20.45■□□□□ 0.86
HTRA2-208ENST00000482331 FHAD1B1AJZ9 1412 aa20.44■□□□□ 0.86
HTRA2-208ENST00000482331 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
HTRA2-208ENST00000482331 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
HTRA2-208ENST00000482331 CEP170Q5SW79 1584 aa20.37■□□□□ 0.85
HTRA2-208ENST00000482331 NUP160Q12769 1436 aa20.34■□□□□ 0.85
HTRA2-208ENST00000482331 IGF1RP08069 1367 aa20.33■□□□□ 0.84
HTRA2-208ENST00000482331 CUL7Q14999 1698 aa20.26■□□□□ 0.83
HTRA2-208ENST00000482331 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
HTRA2-208ENST00000482331 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
HTRA2-208ENST00000482331 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
HTRA2-208ENST00000482331 RUSC2Q8N2Y8 1516 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms