RNA–Protein interactions for RNA: ENST00000482213.1

HDAC10-213, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 469 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-213ENST00000482213 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
HDAC10-213ENST00000482213 ABCC9O60706 1549 aa35.63■■■■□ 3.29
HDAC10-213ENST00000482213 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
HDAC10-213ENST00000482213 RB1CC1Q8TDY2 1594 aa33.77■■■■□ 3
HDAC10-213ENST00000482213 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
HDAC10-213ENST00000482213 NACADO15069 1562 aa33.52■■■□□ 2.96
HDAC10-213ENST00000482213 DCAF8L2P0C7V8 631 aa33.49■■■□□ 2.95
HDAC10-213ENST00000482213 PABPN1Q86U42 306 aaKnown RBP eCLIP33.22■■■□□ 2.91
HDAC10-213ENST00000482213 UNC13AQ9UPW8 1703 aa33.11■■■□□ 2.89
HDAC10-213ENST00000482213 MYO15BQ96JP2 1530 aa33.01■■■□□ 2.87
HDAC10-213ENST00000482213 BICRAQ9NZM4 1560 aa32.91■■■□□ 2.86
HDAC10-213ENST00000482213 ZCCHC6Q5VYS8 1495 aaKnown RBP32.76■■■□□ 2.84
HDAC10-213ENST00000482213 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
HDAC10-213ENST00000482213 SCRIBQ14160 1630 aa32.39■■■□□ 2.78
HDAC10-213ENST00000482213 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
HDAC10-213ENST00000482213 CC2D2AQ9P2K1 1620 aa32.15■■■□□ 2.74
HDAC10-213ENST00000482213 CECR2Q9BXF3 1484 aa32.05■■■□□ 2.72
HDAC10-213ENST00000482213 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
HDAC10-213ENST00000482213 NCAPD3P42695 1498 aa31■■■□□ 2.55
HDAC10-213ENST00000482213 ATAD2BQ9ULI0 1458 aa30.92■■■□□ 2.54
HDAC10-213ENST00000482213 SMARCA4P51532 1647 aa30.86■■■□□ 2.53
HDAC10-213ENST00000482213 SMARCA2P51531 1590 aa30.75■■■□□ 2.51
HDAC10-213ENST00000482213 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
HDAC10-213ENST00000482213 HMGXB3Q12766 1538 aa30.72■■■□□ 2.51
HDAC10-213ENST00000482213 ERCC6Q03468 1493 aa30.68■■■□□ 2.5
HDAC10-213ENST00000482213 BAZ1AQ9NRL2 1556 aaPredicted RBP30.65■■■□□ 2.5
HDAC10-213ENST00000482213 NESP48681 1621 aa30.63■■■□□ 2.49
HDAC10-213ENST00000482213 CUX2O14529 1486 aa30.62■■■□□ 2.49
HDAC10-213ENST00000482213 BAZ1BQ9UIG0 1483 aaKnown RBP30.58■■■□□ 2.49
HDAC10-213ENST00000482213 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
HDAC10-213ENST00000482213 PEG3Q9GZU2 1588 aa30.52■■■□□ 2.48
HDAC10-213ENST00000482213 LAMC3Q9Y6N6 1575 aa30.27■■■□□ 2.44
HDAC10-213ENST00000482213 THOC2Q8NI27 1593 aaKnown RBP30.25■■■□□ 2.43
HDAC10-213ENST00000482213 KIF21AQ7Z4S6 1674 aa30.17■■■□□ 2.42
HDAC10-213ENST00000482213 WIZO95785 1651 aa30.17■■■□□ 2.42
HDAC10-213ENST00000482213 PDS5BQ9NTI5 1447 aa30.09■■■□□ 2.41
HDAC10-213ENST00000482213 CADPSQ9ULU8 1353 aa30.06■■■□□ 2.4
HDAC10-213ENST00000482213 RSF1Q96T23 1441 aaPredicted RBP29.87■■■□□ 2.37
HDAC10-213ENST00000482213 MRC2Q9UBG0 1479 aa29.87■■■□□ 2.37
HDAC10-213ENST00000482213 WDR62O43379 1518 aa29.8■■■□□ 2.36
HDAC10-213ENST00000482213 FANCD2Q9BXW9 1451 aa29.73■■■□□ 2.35
HDAC10-213ENST00000482213 CEP164Q9UPV0 1460 aa29.73■■■□□ 2.35
HDAC10-213ENST00000482213 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
HDAC10-213ENST00000482213 CFTRP13569 1480 aa29.7■■■□□ 2.35
HDAC10-213ENST00000482213 URB2Q14146 1524 aaKnown RBP29.53■■■□□ 2.32
HDAC10-213ENST00000482213 CCDC88BA6NC98 1476 aa29.43■■■□□ 2.3
HDAC10-213ENST00000482213 TRIM41Q8WV44 630 aa29.42■■■□□ 2.3
HDAC10-213ENST00000482213 PRDM2Q13029 1718 aa29.34■■■□□ 2.29
HDAC10-213ENST00000482213 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
HDAC10-213ENST00000482213 ZNF608Q9ULD9 1512 aaPredicted RBP29.2■■■□□ 2.26
HDAC10-213ENST00000482213 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
HDAC10-213ENST00000482213 IFT140Q96RY7 1462 aa29.13■■■□□ 2.25
HDAC10-213ENST00000482213 DNMBPQ6XZF7 1577 aa29.01■■■□□ 2.24
HDAC10-213ENST00000482213 ABCC8Q09428 1581 aa28.99■■■□□ 2.23
HDAC10-213ENST00000482213 EIF4G3O43432 1585 aaKnown RBP28.96■■■□□ 2.23
HDAC10-213ENST00000482213 AQRO60306 1485 aaKnown RBP eCLIP28.92■■■□□ 2.221e-8■■■□□ 18.9
HDAC10-213ENST00000482213 RIMBP3CA6NJZ7 1639 aa28.92■■■□□ 2.22
HDAC10-213ENST00000482213 RIMBP3BA6NNM3 1639 aa28.92■■■□□ 2.22
HDAC10-213ENST00000482213 TARBP1Q13395 1621 aaKnown RBP28.92■■■□□ 2.22
HDAC10-213ENST00000482213 RIMBP3Q9UFD9 1639 aa28.92■■■□□ 2.22
HDAC10-213ENST00000482213 POLA1P09884 1462 aaPredicted RBP28.87■■■□□ 2.21
HDAC10-213ENST00000482213 RAD54L2Q9Y4B4 1467 aa28.83■■■□□ 2.21
HDAC10-213ENST00000482213 ARHGEF11O15085 1522 aa28.8■■■□□ 2.2
HDAC10-213ENST00000482213 CHD1O14646 1710 aa28.77■■■□□ 2.2
HDAC10-213ENST00000482213 SOGA1O94964 1423 aa28.74■■■□□ 2.19
HDAC10-213ENST00000482213 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
HDAC10-213ENST00000482213 FBLN2P98095 1184 aa28.72■■■□□ 2.19
HDAC10-213ENST00000482213 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
HDAC10-213ENST00000482213 CUX1P39880 1505 aa28.68■■■□□ 2.18
HDAC10-213ENST00000482213 CYB5RLQ6IPT4 315 aa28.64■■■□□ 2.18
HDAC10-213ENST00000482213 SNAPC4Q5SXM2 1469 aa28.59■■■□□ 2.17
HDAC10-213ENST00000482213 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
HDAC10-213ENST00000482213 SUPT5HO00267 1087 aaKnown RBP28.55■■■□□ 2.16
HDAC10-213ENST00000482213 WDR97A6NE52 1622 aa28.48■■■□□ 2.15
HDAC10-213ENST00000482213 CHMP7Q8WUX9 453 aaPredicted RBP28.46■■■□□ 2.15
HDAC10-213ENST00000482213 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
HDAC10-213ENST00000482213 CLASP1Q7Z460 1538 aa28.43■■■□□ 2.14
HDAC10-213ENST00000482213 MAGI1Q96QZ7 1491 aaPredicted RBP28.43■■■□□ 2.14
HDAC10-213ENST00000482213 GAPVD1Q14C86 1478 aa28.37■■■□□ 2.13
HDAC10-213ENST00000482213 SYNJ2O15056 1496 aa28.36■■■□□ 2.13
HDAC10-213ENST00000482213 PBRM1Q86U86 1689 aa28.35■■■□□ 2.13
HDAC10-213ENST00000482213 SYNJ1O43426 1573 aa28.35■■■□□ 2.13
HDAC10-213ENST00000482213 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
HDAC10-213ENST00000482213 TRHP20396 242 aaPredicted RBP28.31■■■□□ 2.12
HDAC10-213ENST00000482213 ABCA5Q8WWZ7 1642 aa28.29■■■□□ 2.12
HDAC10-213ENST00000482213 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
HDAC10-213ENST00000482213 TOP2BQ02880 1626 aa28.14■■■□□ 2.1
HDAC10-213ENST00000482213 BIVM-ERCC5R4GMW8 1640 aa28.14■■■□□ 2.1
HDAC10-213ENST00000482213 GRIN2AQ12879 1464 aa28.11■■■□□ 2.09
HDAC10-213ENST00000482213 ERCC6L2Q5T890 1561 aa28.09■■■□□ 2.09
HDAC10-213ENST00000482213 ADAMTS12P58397 1594 aa28.08■■■□□ 2.09
HDAC10-213ENST00000482213 CEP170Q5SW79 1584 aa28.05■■■□□ 2.08
HDAC10-213ENST00000482213 NUP160Q12769 1436 aa28.02■■■□□ 2.08
HDAC10-213ENST00000482213 FHAD1B1AJZ9 1412 aa27.99■■■□□ 2.07
HDAC10-213ENST00000482213 ERICH3Q5RHP9 1530 aa27.93■■■□□ 2.06
HDAC10-213ENST00000482213 SHROOM2Q13796 1616 aa27.89■■■□□ 2.06
HDAC10-213ENST00000482213 PRG4Q92954 1404 aaPredicted RBP27.77■■■□□ 2.04
HDAC10-213ENST00000482213 JPH4Q96JJ6 628 aa27.76■■■□□ 2.03
HDAC10-213ENST00000482213 RUSC2Q8N2Y8 1516 aa27.69■■■□□ 2.02
HDAC10-213ENST00000482213 IGF1RP08069 1367 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms