RNA–Protein interactions for RNA: ENST00000482178.5

PMM1-207, Transcript of phosphomannomutase 1, humanhuman

TSL 2

Gene PMM1, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-207ENST00000482178 NISCHQ9Y2I1 1504 aa28.49■■■□□ 2.15
PMM1-207ENST00000482178 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
PMM1-207ENST00000482178 ZCCHC6Q5VYS8 1495 aaKnown RBP24.03■■□□□ 1.44
PMM1-207ENST00000482178 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.38
PMM1-207ENST00000482178 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
PMM1-207ENST00000482178 DCAF8L2P0C7V8 631 aa23.43■■□□□ 1.34
PMM1-207ENST00000482178 MYO15BQ96JP2 1530 aa23.04■■□□□ 1.28
PMM1-207ENST00000482178 ABCC9O60706 1549 aa23.03■■□□□ 1.28
PMM1-207ENST00000482178 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
PMM1-207ENST00000482178 NACADO15069 1562 aa22.82■■□□□ 1.24
PMM1-207ENST00000482178 SCRIBQ14160 1630 aa22.82■■□□□ 1.24
PMM1-207ENST00000482178 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
PMM1-207ENST00000482178 RSF1Q96T23 1441 aaPredicted RBP22.28■■□□□ 1.16
PMM1-207ENST00000482178 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
PMM1-207ENST00000482178 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
PMM1-207ENST00000482178 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
PMM1-207ENST00000482178 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
PMM1-207ENST00000482178 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.1
PMM1-207ENST00000482178 WIZO95785 1651 aa21.95■■□□□ 1.1
PMM1-207ENST00000482178 BAZ1AQ9NRL2 1556 aaPredicted RBP21.94■■□□□ 1.1
PMM1-207ENST00000482178 SMARCA4P51532 1647 aa21.85■■□□□ 1.09
PMM1-207ENST00000482178 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
PMM1-207ENST00000482178 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
PMM1-207ENST00000482178 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
PMM1-207ENST00000482178 SMARCA2P51531 1590 aa21.51■■□□□ 1.03
PMM1-207ENST00000482178 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
PMM1-207ENST00000482178 CCDC88BA6NC98 1476 aa21.47■■□□□ 1.03
PMM1-207ENST00000482178 TRIM41Q8WV44 630 aa21.43■■□□□ 1.02
PMM1-207ENST00000482178 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
PMM1-207ENST00000482178 LOC105371045A0A1W2PR82 267 aa21.31■■□□□ 1
PMM1-207ENST00000482178 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
PMM1-207ENST00000482178 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
PMM1-207ENST00000482178 FAM9AQ8IZU1 332 aaPredicted RBP21.14■□□□□ 0.98
PMM1-207ENST00000482178 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
PMM1-207ENST00000482178 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
PMM1-207ENST00000482178 WRNQ14191 1432 aaPredicted RBP eCLIP20.94■□□□□ 0.94
PMM1-207ENST00000482178 SYNJ1O43426 1573 aa20.91■□□□□ 0.94
PMM1-207ENST00000482178 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
PMM1-207ENST00000482178 SOGA1O94964 1423 aa20.87■□□□□ 0.93
PMM1-207ENST00000482178 CC2D2AQ9P2K1 1620 aa20.83■□□□□ 0.93
PMM1-207ENST00000482178 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
PMM1-207ENST00000482178 EEA1Q15075 1411 aa20.78■□□□□ 0.92
PMM1-207ENST00000482178 CFTRP13569 1480 aa20.74■□□□□ 0.91
PMM1-207ENST00000482178 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
PMM1-207ENST00000482178 PCGF6Q9BYE7 350 aa20.73■□□□□ 0.91
PMM1-207ENST00000482178 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
PMM1-207ENST00000482178 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
PMM1-207ENST00000482178 CSRNP3Q8WYN3 585 aa20.66■□□□□ 0.9
PMM1-207ENST00000482178 CUX1P39880 1505 aa20.62■□□□□ 0.89
PMM1-207ENST00000482178 GOLGA3Q08378 1498 aa20.58■□□□□ 0.89
PMM1-207ENST00000482178 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
PMM1-207ENST00000482178 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
PMM1-207ENST00000482178 KIF21BO75037 1637 aa20.57■□□□□ 0.88
PMM1-207ENST00000482178 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
PMM1-207ENST00000482178 CEP162Q5TB80 1403 aa20.54■□□□□ 0.88
PMM1-207ENST00000482178 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
PMM1-207ENST00000482178 UBTFP17480 764 aaKnown RBP20.46■□□□□ 0.87
PMM1-207ENST00000482178 HRCP23327 699 aa20.44■□□□□ 0.86
PMM1-207ENST00000482178 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
PMM1-207ENST00000482178 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
PMM1-207ENST00000482178 NESP48681 1621 aa20.37■□□□□ 0.85
PMM1-207ENST00000482178 PRXQ9BXM0 1461 aa20.34■□□□□ 0.85
PMM1-207ENST00000482178 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
PMM1-207ENST00000482178 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.85
PMM1-207ENST00000482178 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
PMM1-207ENST00000482178 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
PMM1-207ENST00000482178 LAMC3Q9Y6N6 1575 aa20.3■□□□□ 0.84
PMM1-207ENST00000482178 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
PMM1-207ENST00000482178 CLIP1P30622 1438 aa20.27■□□□□ 0.84
PMM1-207ENST00000482178 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
PMM1-207ENST00000482178 CUX2O14529 1486 aa20.26■□□□□ 0.83
PMM1-207ENST00000482178 TOPBP1Q92547 1522 aa20.21■□□□□ 0.83
PMM1-207ENST00000482178 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
PMM1-207ENST00000482178 IGF1RP08069 1367 aa20.15■□□□□ 0.82
PMM1-207ENST00000482178 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
PMM1-207ENST00000482178 URB2Q14146 1524 aaKnown RBP20.14■□□□□ 0.81
PMM1-207ENST00000482178 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
PMM1-207ENST00000482178 KIF21AQ7Z4S6 1674 aa20.12■□□□□ 0.81
PMM1-207ENST00000482178 PDS5BQ9NTI5 1447 aa20.11■□□□□ 0.81
PMM1-207ENST00000482178 RANGAP1P46060 587 aaPredicted RBP20.1■□□□□ 0.81
PMM1-207ENST00000482178 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
PMM1-207ENST00000482178 TTBK1Q5TCY1 1321 aaPredicted RBP20.1■□□□□ 0.81
PMM1-207ENST00000482178 ARAP1Q96P48 1450 aa20.08■□□□□ 0.8
PMM1-207ENST00000482178 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
PMM1-207ENST00000482178 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
PMM1-207ENST00000482178 ARHGAP35Q9NRY4 1499 aa19.97■□□□□ 0.79
PMM1-207ENST00000482178 CUL7Q14999 1698 aa19.96■□□□□ 0.79
PMM1-207ENST00000482178 ABCA5Q8WWZ7 1642 aa19.95■□□□□ 0.78
PMM1-207ENST00000482178 TARBP1Q13395 1621 aaKnown RBP19.89■□□□□ 0.78
PMM1-207ENST00000482178 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
PMM1-207ENST00000482178 APLP2Q06481 763 aa19.88■□□□□ 0.77
PMM1-207ENST00000482178 MRC2Q9UBG0 1479 aa19.88■□□□□ 0.77
PMM1-207ENST00000482178 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
PMM1-207ENST00000482178 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
PMM1-207ENST00000482178 CTTNBP2Q8WZ74 1663 aa19.83■□□□□ 0.76
PMM1-207ENST00000482178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
PMM1-207ENST00000482178 WDR62O43379 1518 aa19.77■□□□□ 0.75
PMM1-207ENST00000482178 PBRM1Q86U86 1689 aa19.77■□□□□ 0.75
PMM1-207ENST00000482178 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
PMM1-207ENST00000482178 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms