RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 NISCHQ9Y2I1 1504 aa26.36■■□□□ 1.81
GGPS1-205ENST00000482013 CCDC180Q9P1Z9 1646 aa23.04■■□□□ 1.28
GGPS1-205ENST00000482013 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
GGPS1-205ENST00000482013 DCAF1Q9Y4B6 1507 aa21.9■■□□□ 1.1
GGPS1-205ENST00000482013 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
GGPS1-205ENST00000482013 DCAF8L2P0C7V8 631 aa21.59■■□□□ 1.05
GGPS1-205ENST00000482013 ABCC9O60706 1549 aa21.53■■□□□ 1.04
GGPS1-205ENST00000482013 NACADO15069 1562 aa21.42■■□□□ 1.02
GGPS1-205ENST00000482013 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
GGPS1-205ENST00000482013 RB1CC1Q8TDY2 1594 aa21.2■□□□□ 0.98
GGPS1-205ENST00000482013 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
GGPS1-205ENST00000482013 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
GGPS1-205ENST00000482013 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
GGPS1-205ENST00000482013 BICRAQ9NZM4 1560 aa20.5■□□□□ 0.87
GGPS1-205ENST00000482013 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
GGPS1-205ENST00000482013 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
GGPS1-205ENST00000482013 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
GGPS1-205ENST00000482013 MROH2BQ7Z745 1585 aa20.31■□□□□ 0.84
GGPS1-205ENST00000482013 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
GGPS1-205ENST00000482013 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
GGPS1-205ENST00000482013 WIZO95785 1651 aa20.15■□□□□ 0.82
GGPS1-205ENST00000482013 PEG3Q9GZU2 1588 aa20.06■□□□□ 0.8
GGPS1-205ENST00000482013 TOP2AP11388 1531 aaKnown RBP20.01■□□□□ 0.79
GGPS1-205ENST00000482013 SMARCA2P51531 1590 aa19.93■□□□□ 0.78
GGPS1-205ENST00000482013 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
GGPS1-205ENST00000482013 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
GGPS1-205ENST00000482013 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
GGPS1-205ENST00000482013 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
GGPS1-205ENST00000482013 BAZ1BQ9UIG0 1483 aaKnown RBP19.77■□□□□ 0.76
GGPS1-205ENST00000482013 NCAPD3P42695 1498 aa19.75■□□□□ 0.75
GGPS1-205ENST00000482013 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
GGPS1-205ENST00000482013 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
GGPS1-205ENST00000482013 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
GGPS1-205ENST00000482013 CFTRP13569 1480 aa19.3■□□□□ 0.68
GGPS1-205ENST00000482013 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
GGPS1-205ENST00000482013 PRDM2Q13029 1718 aa19.28■□□□□ 0.68
GGPS1-205ENST00000482013 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
GGPS1-205ENST00000482013 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
GGPS1-205ENST00000482013 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
GGPS1-205ENST00000482013 TOP2BQ02880 1626 aa19.12■□□□□ 0.65
GGPS1-205ENST00000482013 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
GGPS1-205ENST00000482013 EEA1Q15075 1411 aa19.12■□□□□ 0.65
GGPS1-205ENST00000482013 LAMC3Q9Y6N6 1575 aa19.07■□□□□ 0.64
GGPS1-205ENST00000482013 LOC105371045A0A1W2PR82 267 aa19.03■□□□□ 0.64
GGPS1-205ENST00000482013 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
GGPS1-205ENST00000482013 CUX1P39880 1505 aa19■□□□□ 0.63
GGPS1-205ENST00000482013 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
GGPS1-205ENST00000482013 SOGA1O94964 1423 aa18.97■□□□□ 0.63
GGPS1-205ENST00000482013 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
GGPS1-205ENST00000482013 NESP48681 1621 aa18.92■□□□□ 0.62
GGPS1-205ENST00000482013 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
GGPS1-205ENST00000482013 RUSC2Q8N2Y8 1516 aa18.88■□□□□ 0.61
GGPS1-205ENST00000482013 DNAJC5BQ9UF47 199 aa18.87■□□□□ 0.61
GGPS1-205ENST00000482013 CEP164Q9UPV0 1460 aa18.86■□□□□ 0.61
GGPS1-205ENST00000482013 DNMBPQ6XZF7 1577 aa18.85■□□□□ 0.61
GGPS1-205ENST00000482013 KIF21BO75037 1637 aa18.82■□□□□ 0.6
GGPS1-205ENST00000482013 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
GGPS1-205ENST00000482013 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
GGPS1-205ENST00000482013 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
GGPS1-205ENST00000482013 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.6
GGPS1-205ENST00000482013 TNIKQ9UKE5 1360 aa18.76■□□□□ 0.59
GGPS1-205ENST00000482013 KIF21AQ7Z4S6 1674 aa18.75■□□□□ 0.59
GGPS1-205ENST00000482013 URB2Q14146 1524 aaKnown RBP18.72■□□□□ 0.59
GGPS1-205ENST00000482013 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
GGPS1-205ENST00000482013 POLA1P09884 1462 aaPredicted RBP18.68■□□□□ 0.58
GGPS1-205ENST00000482013 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
GGPS1-205ENST00000482013 ABCA10Q8WWZ4 1543 aa18.67■□□□□ 0.58
GGPS1-205ENST00000482013 CUX2O14529 1486 aa18.66■□□□□ 0.58
GGPS1-205ENST00000482013 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.57
GGPS1-205ENST00000482013 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
GGPS1-205ENST00000482013 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
GGPS1-205ENST00000482013 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
GGPS1-205ENST00000482013 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
GGPS1-205ENST00000482013 CEP162Q5TB80 1403 aa18.59■□□□□ 0.57
GGPS1-205ENST00000482013 IGF1RP08069 1367 aa18.59■□□□□ 0.57
GGPS1-205ENST00000482013 RAD54L2Q9Y4B4 1467 aa18.58■□□□□ 0.56
GGPS1-205ENST00000482013 WDR62O43379 1518 aa18.54■□□□□ 0.56
GGPS1-205ENST00000482013 TARBP1Q13395 1621 aaKnown RBP18.52■□□□□ 0.55
GGPS1-205ENST00000482013 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
GGPS1-205ENST00000482013 CUL7Q14999 1698 aa18.5■□□□□ 0.55
GGPS1-205ENST00000482013 ABCA5Q8WWZ7 1642 aa18.5■□□□□ 0.55
GGPS1-205ENST00000482013 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
GGPS1-205ENST00000482013 CLIP1P30622 1438 aa18.45■□□□□ 0.54
GGPS1-205ENST00000482013 GAPVD1Q14C86 1478 aa18.45■□□□□ 0.54
GGPS1-205ENST00000482013 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
GGPS1-205ENST00000482013 IFT140Q96RY7 1462 aa18.44■□□□□ 0.54
GGPS1-205ENST00000482013 TDRD9Q8NDG6 1382 aaKnown RBP18.39■□□□□ 0.53
GGPS1-205ENST00000482013 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
GGPS1-205ENST00000482013 PBRM1Q86U86 1689 aa18.35■□□□□ 0.53
GGPS1-205ENST00000482013 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
GGPS1-205ENST00000482013 GRIN2BQ13224 1484 aa18.31■□□□□ 0.52
GGPS1-205ENST00000482013 CTTNBP2Q8WZ74 1663 aa18.29■□□□□ 0.52
GGPS1-205ENST00000482013 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
GGPS1-205ENST00000482013 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.51
GGPS1-205ENST00000482013 ARAP1Q96P48 1450 aa18.25■□□□□ 0.51
GGPS1-205ENST00000482013 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
GGPS1-205ENST00000482013 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
GGPS1-205ENST00000482013 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
GGPS1-205ENST00000482013 ZNF608Q9ULD9 1512 aaPredicted RBP18.23■□□□□ 0.51
GGPS1-205ENST00000482013 EIF4G3O43432 1585 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms