RNA–Protein interactions for RNA: ENST00000481992.1

PSMD11-204, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-204ENST00000481992 NISCHQ9Y2I1 1504 aa33.07■■■□□ 2.88
PSMD11-204ENST00000481992 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
PSMD11-204ENST00000481992 ABCC9O60706 1549 aa29.54■■■□□ 2.32
PSMD11-204ENST00000481992 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
PSMD11-204ENST00000481992 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
PSMD11-204ENST00000481992 NACADO15069 1562 aa28.03■■■□□ 2.08
PSMD11-204ENST00000481992 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
PSMD11-204ENST00000481992 DCAF8L2P0C7V8 631 aa27.72■■■□□ 2.03
PSMD11-204ENST00000481992 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
PSMD11-204ENST00000481992 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
PSMD11-204ENST00000481992 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
PSMD11-204ENST00000481992 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
PSMD11-204ENST00000481992 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
PSMD11-204ENST00000481992 SHROOM4Q9ULL8 1493 aa27.06■■□□□ 1.92
PSMD11-204ENST00000481992 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
PSMD11-204ENST00000481992 CC2D2AQ9P2K1 1620 aa26.73■■□□□ 1.87
PSMD11-204ENST00000481992 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
PSMD11-204ENST00000481992 DNAJC5Q9H3Z4 198 aa26.66■■□□□ 1.86
PSMD11-204ENST00000481992 CECR2Q9BXF3 1484 aa26.62■■□□□ 1.85
PSMD11-204ENST00000481992 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
PSMD11-204ENST00000481992 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
PSMD11-204ENST00000481992 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
PSMD11-204ENST00000481992 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
PSMD11-204ENST00000481992 HMGXB3Q12766 1538 aa25.69■■□□□ 1.7
PSMD11-204ENST00000481992 BAZ1AQ9NRL2 1556 aaPredicted RBP25.65■■□□□ 1.7
PSMD11-204ENST00000481992 CUX2O14529 1486 aa25.59■■□□□ 1.69
PSMD11-204ENST00000481992 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
PSMD11-204ENST00000481992 BAZ1BQ9UIG0 1483 aaKnown RBP25.5■■□□□ 1.67
PSMD11-204ENST00000481992 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
PSMD11-204ENST00000481992 ERCC6Q03468 1493 aa25.47■■□□□ 1.67
PSMD11-204ENST00000481992 NESP48681 1621 aa25.41■■□□□ 1.66
PSMD11-204ENST00000481992 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
PSMD11-204ENST00000481992 THOC2Q8NI27 1593 aaKnown RBP25.19■■□□□ 1.62
PSMD11-204ENST00000481992 TRIM41Q8WV44 630 aa25.16■■□□□ 1.62
PSMD11-204ENST00000481992 WIZO95785 1651 aa25.15■■□□□ 1.62
PSMD11-204ENST00000481992 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
PSMD11-204ENST00000481992 PDS5BQ9NTI5 1447 aa25.1■■□□□ 1.61
PSMD11-204ENST00000481992 CADPSQ9ULU8 1353 aa25.06■■□□□ 1.6
PSMD11-204ENST00000481992 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.59
PSMD11-204ENST00000481992 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
PSMD11-204ENST00000481992 WDR62O43379 1518 aa24.86■■□□□ 1.57
PSMD11-204ENST00000481992 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
PSMD11-204ENST00000481992 CFTRP13569 1480 aa24.82■■□□□ 1.56
PSMD11-204ENST00000481992 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
PSMD11-204ENST00000481992 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
PSMD11-204ENST00000481992 PRDM2Q13029 1718 aa24.58■■□□□ 1.53
PSMD11-204ENST00000481992 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
PSMD11-204ENST00000481992 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
PSMD11-204ENST00000481992 OSCARQ8IYS5 282 aa24.43■■□□□ 1.5
PSMD11-204ENST00000481992 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
PSMD11-204ENST00000481992 IFT140Q96RY7 1462 aa24.31■■□□□ 1.48
PSMD11-204ENST00000481992 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
PSMD11-204ENST00000481992 ZNF608Q9ULD9 1512 aaPredicted RBP24.25■■□□□ 1.47
PSMD11-204ENST00000481992 DNMBPQ6XZF7 1577 aa24.24■■□□□ 1.47
PSMD11-204ENST00000481992 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.46
PSMD11-204ENST00000481992 EIF4G3O43432 1585 aaKnown RBP24.13■■□□□ 1.45
PSMD11-204ENST00000481992 POLA1P09884 1462 aaPredicted RBP24.07■■□□□ 1.44
PSMD11-204ENST00000481992 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
PSMD11-204ENST00000481992 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
PSMD11-204ENST00000481992 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
PSMD11-204ENST00000481992 AQRO60306 1485 aaKnown RBP eCLIP24.02■■□□□ 1.445e-8■■■□□ 18.8
PSMD11-204ENST00000481992 TRHP20396 242 aaPredicted RBP23.96■■□□□ 1.43
PSMD11-204ENST00000481992 RAD54L2Q9Y4B4 1467 aa23.95■■□□□ 1.42
PSMD11-204ENST00000481992 SOGA1O94964 1423 aa23.94■■□□□ 1.42
PSMD11-204ENST00000481992 CHD1O14646 1710 aa23.94■■□□□ 1.42
PSMD11-204ENST00000481992 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
PSMD11-204ENST00000481992 ARHGEF11O15085 1522 aa23.93■■□□□ 1.42
PSMD11-204ENST00000481992 CUX1P39880 1505 aa23.92■■□□□ 1.42
PSMD11-204ENST00000481992 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
PSMD11-204ENST00000481992 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
PSMD11-204ENST00000481992 AEBP2Q6ZN18 517 aaPredicted RBP23.89■■□□□ 1.41
PSMD11-204ENST00000481992 TDRD9Q8NDG6 1382 aaKnown RBP23.87■■□□□ 1.41
PSMD11-204ENST00000481992 SNAPC4Q5SXM2 1469 aa23.78■■□□□ 1.4
PSMD11-204ENST00000481992 FBLN2P98095 1184 aa23.77■■□□□ 1.4
PSMD11-204ENST00000481992 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
PSMD11-204ENST00000481992 SUPT5HO00267 1087 aaKnown RBP23.75■■□□□ 1.39
PSMD11-204ENST00000481992 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
PSMD11-204ENST00000481992 CLASP1Q7Z460 1538 aa23.7■■□□□ 1.38
PSMD11-204ENST00000481992 ARAP1Q96P48 1450 aa23.7■■□□□ 1.38
PSMD11-204ENST00000481992 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
PSMD11-204ENST00000481992 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
PSMD11-204ENST00000481992 GAPVD1Q14C86 1478 aa23.66■■□□□ 1.38
PSMD11-204ENST00000481992 PBRM1Q86U86 1689 aa23.66■■□□□ 1.38
PSMD11-204ENST00000481992 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
PSMD11-204ENST00000481992 ABCA5Q8WWZ7 1642 aa23.65■■□□□ 1.38
PSMD11-204ENST00000481992 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
PSMD11-204ENST00000481992 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.36
PSMD11-204ENST00000481992 TOP2BQ02880 1626 aa23.55■■□□□ 1.36
PSMD11-204ENST00000481992 WRNQ14191 1432 aaPredicted RBP eCLIP23.55■■□□□ 1.36
PSMD11-204ENST00000481992 ADAMTS12P58397 1594 aa23.44■■□□□ 1.34
PSMD11-204ENST00000481992 GRIN2AQ12879 1464 aa23.44■■□□□ 1.34
PSMD11-204ENST00000481992 NUP160Q12769 1436 aa23.39■■□□□ 1.33
PSMD11-204ENST00000481992 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
PSMD11-204ENST00000481992 FHAD1B1AJZ9 1412 aa23.37■■□□□ 1.33
PSMD11-204ENST00000481992 CEP170Q5SW79 1584 aa23.36■■□□□ 1.33
PSMD11-204ENST00000481992 ERCC6L2Q5T890 1561 aa23.31■■□□□ 1.32
PSMD11-204ENST00000481992 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
PSMD11-204ENST00000481992 RUSC2Q8N2Y8 1516 aa23.12■■□□□ 1.29
PSMD11-204ENST00000481992 JPH4Q96JJ6 628 aa23.11■■□□□ 1.29
PSMD11-204ENST00000481992 PRG4Q92954 1404 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms