RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 NISCHQ9Y2I1 1504 aa42.02■■■■■ 4.32
NUP58-212ENST00000481980 ABCC9O60706 1549 aa37.81■■■■□ 3.64
NUP58-212ENST00000481980 CCDC180Q9P1Z9 1646 aa37.69■■■■□ 3.62
NUP58-212ENST00000481980 RB1CC1Q8TDY2 1594 aa35.94■■■■□ 3.34
NUP58-212ENST00000481980 NACADO15069 1562 aa35.69■■■■□ 3.3
NUP58-212ENST00000481980 DNAJC5BQ9UF47 199 aa35.59■■■■□ 3.29
NUP58-212ENST00000481980 DCAF8L2P0C7V8 631 aa35.54■■■■□ 3.28
NUP58-212ENST00000481980 PABPN1Q86U42 306 aaKnown RBP eCLIP35.22■■■■□ 3.23
NUP58-212ENST00000481980 MYO15BQ96JP2 1530 aa35.19■■■■□ 3.22
NUP58-212ENST00000481980 UNC13AQ9UPW8 1703 aa35.06■■■■□ 3.2
NUP58-212ENST00000481980 BICRAQ9NZM4 1560 aa34.9■■■■□ 3.18
NUP58-212ENST00000481980 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
NUP58-212ENST00000481980 DCAF1Q9Y4B6 1507 aa34.71■■■■□ 3.15
NUP58-212ENST00000481980 SHROOM4Q9ULL8 1493 aa34.45■■■■□ 3.1
NUP58-212ENST00000481980 SCRIBQ14160 1630 aa34.34■■■■□ 3.09
NUP58-212ENST00000481980 CC2D2AQ9P2K1 1620 aa34.13■■■■□ 3.05
NUP58-212ENST00000481980 CECR2Q9BXF3 1484 aa34.07■■■■□ 3.05
NUP58-212ENST00000481980 EIF4G1Q04637 1599 aaKnown RBP34.05■■■■□ 3.04
NUP58-212ENST00000481980 NCAPD3P42695 1498 aa32.99■■■□□ 2.87
NUP58-212ENST00000481980 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
NUP58-212ENST00000481980 SMARCA4P51532 1647 aa32.77■■■□□ 2.84
NUP58-212ENST00000481980 DNAJC5Q9H3Z4 198 aa32.75■■■□□ 2.83
NUP58-212ENST00000481980 SMARCA2P51531 1590 aa32.74■■■□□ 2.83
NUP58-212ENST00000481980 HMGXB3Q12766 1538 aa32.69■■■□□ 2.82
NUP58-212ENST00000481980 ERCC6Q03468 1493 aa32.65■■■□□ 2.82
NUP58-212ENST00000481980 CUX2O14529 1486 aa32.62■■■□□ 2.81
NUP58-212ENST00000481980 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
NUP58-212ENST00000481980 BAZ1BQ9UIG0 1483 aaKnown RBP32.52■■■□□ 2.8
NUP58-212ENST00000481980 PEG3Q9GZU2 1588 aa32.47■■■□□ 2.79
NUP58-212ENST00000481980 NESP48681 1621 aa32.45■■■□□ 2.79
NUP58-212ENST00000481980 MROH2BQ7Z745 1585 aa32.36■■■□□ 2.77
NUP58-212ENST00000481980 LAMC3Q9Y6N6 1575 aa32.21■■■□□ 2.75
NUP58-212ENST00000481980 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
NUP58-212ENST00000481980 PDS5BQ9NTI5 1447 aa32.07■■■□□ 2.72
NUP58-212ENST00000481980 KIF21AQ7Z4S6 1674 aa31.99■■■□□ 2.71
NUP58-212ENST00000481980 CADPSQ9ULU8 1353 aa31.98■■■□□ 2.71
NUP58-212ENST00000481980 WIZO95785 1651 aa31.95■■■□□ 2.7
NUP58-212ENST00000481980 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
NUP58-212ENST00000481980 RSF1Q96T23 1441 aaPredicted RBP31.69■■■□□ 2.66
NUP58-212ENST00000481980 WDR62O43379 1518 aa31.68■■■□□ 2.66
NUP58-212ENST00000481980 CEP164Q9UPV0 1460 aa31.62■■■□□ 2.65
NUP58-212ENST00000481980 FANCD2Q9BXW9 1451 aa31.59■■■□□ 2.65
NUP58-212ENST00000481980 CFTRP13569 1480 aa31.59■■■□□ 2.65
NUP58-212ENST00000481980 TOP2AP11388 1531 aaKnown RBP31.55■■■□□ 2.64
NUP58-212ENST00000481980 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
NUP58-212ENST00000481980 TRIM41Q8WV44 630 aa31.25■■■□□ 2.59
NUP58-212ENST00000481980 CCDC88BA6NC98 1476 aa31.23■■■□□ 2.59
NUP58-212ENST00000481980 OSCARQ8IYS5 282 aa31.17■■■□□ 2.58
NUP58-212ENST00000481980 PRDM2Q13029 1718 aa31.16■■■□□ 2.58
NUP58-212ENST00000481980 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
NUP58-212ENST00000481980 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
NUP58-212ENST00000481980 ZNF608Q9ULD9 1512 aaPredicted RBP30.96■■■□□ 2.55
NUP58-212ENST00000481980 ABCC8Q09428 1581 aa30.93■■■□□ 2.54
NUP58-212ENST00000481980 DNMBPQ6XZF7 1577 aa30.84■■■□□ 2.53
NUP58-212ENST00000481980 EIF4G3O43432 1585 aaKnown RBP30.75■■■□□ 2.51
NUP58-212ENST00000481980 TARBP1Q13395 1621 aaKnown RBP30.7■■■□□ 2.51
NUP58-212ENST00000481980 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
NUP58-212ENST00000481980 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
NUP58-212ENST00000481980 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
NUP58-212ENST00000481980 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.52e-6■□□□□ 10
NUP58-212ENST00000481980 POLA1P09884 1462 aaPredicted RBP30.66■■■□□ 2.5
NUP58-212ENST00000481980 ARHGEF11O15085 1522 aa30.61■■■□□ 2.49
NUP58-212ENST00000481980 RAD54L2Q9Y4B4 1467 aa30.55■■■□□ 2.48
NUP58-212ENST00000481980 SOGA1O94964 1423 aa30.55■■■□□ 2.48
NUP58-212ENST00000481980 FBLN2P98095 1184 aa30.52■■■□□ 2.48
NUP58-212ENST00000481980 CHD1O14646 1710 aa30.51■■■□□ 2.47
NUP58-212ENST00000481980 TDRD9Q8NDG6 1382 aaKnown RBP30.5■■■□□ 2.47
NUP58-212ENST00000481980 FGD5Q6ZNL6 1462 aa30.44■■■□□ 2.46
NUP58-212ENST00000481980 CYB5RLQ6IPT4 315 aa30.44■■■□□ 2.46
NUP58-212ENST00000481980 CUX1P39880 1505 aa30.41■■■□□ 2.46
NUP58-212ENST00000481980 WDR97A6NE52 1622 aa30.38■■■□□ 2.45
NUP58-212ENST00000481980 SNAPC4Q5SXM2 1469 aa30.35■■■□□ 2.45
NUP58-212ENST00000481980 ARAP1Q96P48 1450 aa30.31■■■□□ 2.44
NUP58-212ENST00000481980 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
NUP58-212ENST00000481980 GRIN2BQ13224 1484 aa30.28■■■□□ 2.44
NUP58-212ENST00000481980 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
NUP58-212ENST00000481980 SUPT5HO00267 1087 aaKnown RBP30.24■■■□□ 2.43
NUP58-212ENST00000481980 CLASP1Q7Z460 1538 aa30.21■■■□□ 2.43
NUP58-212ENST00000481980 SYNJ1O43426 1573 aa30.18■■■□□ 2.42
NUP58-212ENST00000481980 SYNJ2O15056 1496 aa30.18■■■□□ 2.42
NUP58-212ENST00000481980 GAPVD1Q14C86 1478 aa30.15■■■□□ 2.42
NUP58-212ENST00000481980 TRHP20396 242 aaPredicted RBP30.12■■■□□ 2.41
NUP58-212ENST00000481980 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
NUP58-212ENST00000481980 PBRM1Q86U86 1689 aa30.07■■■□□ 2.41
NUP58-212ENST00000481980 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
NUP58-212ENST00000481980 WRNQ14191 1432 aaPredicted RBP eCLIP30■■■□□ 2.39
NUP58-212ENST00000481980 TOP2BQ02880 1626 aa29.89■■■□□ 2.38
NUP58-212ENST00000481980 BIVM-ERCC5R4GMW8 1640 aa29.88■■■□□ 2.37
NUP58-212ENST00000481980 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
NUP58-212ENST00000481980 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
NUP58-212ENST00000481980 FHAD1B1AJZ9 1412 aa29.79■■■□□ 2.36
NUP58-212ENST00000481980 NUP160Q12769 1436 aa29.79■■■□□ 2.36
NUP58-212ENST00000481980 CEP170Q5SW79 1584 aa29.75■■■□□ 2.35
NUP58-212ENST00000481980 ERICH3Q5RHP9 1530 aa29.73■■■□□ 2.35
NUP58-212ENST00000481980 ERCC6L2Q5T890 1561 aa29.73■■■□□ 2.35
NUP58-212ENST00000481980 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
NUP58-212ENST00000481980 JPH4Q96JJ6 628 aa29.52■■■□□ 2.32
NUP58-212ENST00000481980 PRG4Q92954 1404 aaPredicted RBP29.52■■■□□ 2.32
NUP58-212ENST00000481980 RUSC2Q8N2Y8 1516 aa29.4■■■□□ 2.3
NUP58-212ENST00000481980 IGF1RP08069 1367 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 776.2 ms