RNA–Protein interactions for RNA: ENST00000481925.1

RETREG2-210, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 4

Gene RETREG2, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-210ENST00000481925 NISCHQ9Y2I1 1504 aa29.06■■■□□ 2.24
RETREG2-210ENST00000481925 ABCC9O60706 1549 aa26.21■■□□□ 1.79
RETREG2-210ENST00000481925 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
RETREG2-210ENST00000481925 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
RETREG2-210ENST00000481925 NACADO15069 1562 aa24.76■■□□□ 1.55
RETREG2-210ENST00000481925 DNAJC5BQ9UF47 199 aa24.63■■□□□ 1.53
RETREG2-210ENST00000481925 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
RETREG2-210ENST00000481925 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
RETREG2-210ENST00000481925 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
RETREG2-210ENST00000481925 UNC13AQ9UPW8 1703 aa24.27■■□□□ 1.48
RETREG2-210ENST00000481925 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
RETREG2-210ENST00000481925 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
RETREG2-210ENST00000481925 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
RETREG2-210ENST00000481925 SHROOM4Q9ULL8 1493 aa23.97■■□□□ 1.43
RETREG2-210ENST00000481925 SCRIBQ14160 1630 aa23.77■■□□□ 1.4
RETREG2-210ENST00000481925 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
RETREG2-210ENST00000481925 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
RETREG2-210ENST00000481925 EIF4G1Q04637 1599 aaKnown RBP23.62■■□□□ 1.37
RETREG2-210ENST00000481925 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
RETREG2-210ENST00000481925 DNAJC5Q9H3Z4 198 aa22.79■■□□□ 1.24
RETREG2-210ENST00000481925 ATAD2BQ9ULI0 1458 aa22.74■■□□□ 1.23
RETREG2-210ENST00000481925 SMARCA2P51531 1590 aa22.72■■□□□ 1.23
RETREG2-210ENST00000481925 CUX2O14529 1486 aa22.71■■□□□ 1.23
RETREG2-210ENST00000481925 ERCC6Q03468 1493 aa22.7■■□□□ 1.22
RETREG2-210ENST00000481925 SMARCA4P51532 1647 aa22.68■■□□□ 1.22
RETREG2-210ENST00000481925 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
RETREG2-210ENST00000481925 BAZ1AQ9NRL2 1556 aaPredicted RBP22.6■■□□□ 1.21
RETREG2-210ENST00000481925 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
RETREG2-210ENST00000481925 PEG3Q9GZU2 1588 aa22.5■■□□□ 1.19
RETREG2-210ENST00000481925 NESP48681 1621 aa22.46■■□□□ 1.19
RETREG2-210ENST00000481925 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
RETREG2-210ENST00000481925 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
RETREG2-210ENST00000481925 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
RETREG2-210ENST00000481925 PDS5BQ9NTI5 1447 aa22.26■■□□□ 1.15
RETREG2-210ENST00000481925 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
RETREG2-210ENST00000481925 CADPSQ9ULU8 1353 aa22.15■■□□□ 1.14
RETREG2-210ENST00000481925 WIZO95785 1651 aa22.06■■□□□ 1.12
RETREG2-210ENST00000481925 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
RETREG2-210ENST00000481925 WDR62O43379 1518 aa22■■□□□ 1.11
RETREG2-210ENST00000481925 CEP164Q9UPV0 1460 aa21.94■■□□□ 1.1
RETREG2-210ENST00000481925 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
RETREG2-210ENST00000481925 CFTRP13569 1480 aa21.88■■□□□ 1.09
RETREG2-210ENST00000481925 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
RETREG2-210ENST00000481925 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
RETREG2-210ENST00000481925 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
RETREG2-210ENST00000481925 URB2Q14146 1524 aaKnown RBP21.69■■□□□ 1.06
RETREG2-210ENST00000481925 OSCARQ8IYS5 282 aa21.64■■□□□ 1.05
RETREG2-210ENST00000481925 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
RETREG2-210ENST00000481925 CCDC88BA6NC98 1476 aa21.57■■□□□ 1.04
RETREG2-210ENST00000481925 IFT140Q96RY7 1462 aa21.52■■□□□ 1.04
RETREG2-210ENST00000481925 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
RETREG2-210ENST00000481925 TOPBP1Q92547 1522 aa21.45■■□□□ 1.02
RETREG2-210ENST00000481925 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
RETREG2-210ENST00000481925 DNMBPQ6XZF7 1577 aa21.38■■□□□ 1.01
RETREG2-210ENST00000481925 EIF4G3O43432 1585 aaKnown RBP21.33■■□□□ 1.01
RETREG2-210ENST00000481925 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
RETREG2-210ENST00000481925 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
RETREG2-210ENST00000481925 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
RETREG2-210ENST00000481925 ARHGEF11O15085 1522 aa21.27■■□□□ 1
RETREG2-210ENST00000481925 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
RETREG2-210ENST00000481925 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.993e-6■■■□□ 18.6
RETREG2-210ENST00000481925 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
RETREG2-210ENST00000481925 CHD1O14646 1710 aa21.15■□□□□ 0.98
RETREG2-210ENST00000481925 SOGA1O94964 1423 aa21.14■□□□□ 0.98
RETREG2-210ENST00000481925 FBLN2P98095 1184 aa21.14■□□□□ 0.97
RETREG2-210ENST00000481925 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
RETREG2-210ENST00000481925 WDR97A6NE52 1622 aa21.11■□□□□ 0.97
RETREG2-210ENST00000481925 CYB5RLQ6IPT4 315 aa21.1■□□□□ 0.97
RETREG2-210ENST00000481925 TDRD9Q8NDG6 1382 aaKnown RBP21.09■□□□□ 0.97
RETREG2-210ENST00000481925 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
RETREG2-210ENST00000481925 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
RETREG2-210ENST00000481925 ARAP1Q96P48 1450 aa21.03■□□□□ 0.96
RETREG2-210ENST00000481925 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
RETREG2-210ENST00000481925 CUX1P39880 1505 aa21.01■□□□□ 0.95
RETREG2-210ENST00000481925 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
RETREG2-210ENST00000481925 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
RETREG2-210ENST00000481925 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
RETREG2-210ENST00000481925 CLASP1Q7Z460 1538 aa20.95■□□□□ 0.94
RETREG2-210ENST00000481925 SYNJ2O15056 1496 aa20.94■□□□□ 0.94
RETREG2-210ENST00000481925 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
RETREG2-210ENST00000481925 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
RETREG2-210ENST00000481925 ABCA10Q8WWZ4 1543 aa20.85■□□□□ 0.93
RETREG2-210ENST00000481925 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
RETREG2-210ENST00000481925 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
RETREG2-210ENST00000481925 SUPT5HO00267 1087 aaKnown RBP20.8■□□□□ 0.92
RETREG2-210ENST00000481925 WRNQ14191 1432 aaPredicted RBP eCLIP20.77■□□□□ 0.91
RETREG2-210ENST00000481925 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
RETREG2-210ENST00000481925 TOP2BQ02880 1626 aa20.68■□□□□ 0.9
RETREG2-210ENST00000481925 ADAMTS12P58397 1594 aa20.67■□□□□ 0.9
RETREG2-210ENST00000481925 BIVM-ERCC5R4GMW8 1640 aa20.67■□□□□ 0.9
RETREG2-210ENST00000481925 NUP160Q12769 1436 aa20.64■□□□□ 0.89
RETREG2-210ENST00000481925 FHAD1B1AJZ9 1412 aa20.63■□□□□ 0.89
RETREG2-210ENST00000481925 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
RETREG2-210ENST00000481925 ERICH3Q5RHP9 1530 aa20.6■□□□□ 0.89
RETREG2-210ENST00000481925 ERCC6L2Q5T890 1561 aa20.56■□□□□ 0.88
RETREG2-210ENST00000481925 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
RETREG2-210ENST00000481925 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
RETREG2-210ENST00000481925 AEBP2Q6ZN18 517 aaPredicted RBP20.43■□□□□ 0.86
RETREG2-210ENST00000481925 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
RETREG2-210ENST00000481925 RUSC2Q8N2Y8 1516 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms