RNA–Protein interactions for RNA: ENST00000481914.2

RAB3A-203, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB3A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-203ENST00000481914 NISCHQ9Y2I1 1504 aa29.11■■■□□ 2.25
RAB3A-203ENST00000481914 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
RAB3A-203ENST00000481914 ABCC9O60706 1549 aa25.63■■□□□ 1.69
RAB3A-203ENST00000481914 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
RAB3A-203ENST00000481914 NACADO15069 1562 aa24.43■■□□□ 1.5
RAB3A-203ENST00000481914 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.49
RAB3A-203ENST00000481914 MYO15BQ96JP2 1530 aa24.22■■□□□ 1.47
RAB3A-203ENST00000481914 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
RAB3A-203ENST00000481914 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
RAB3A-203ENST00000481914 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
RAB3A-203ENST00000481914 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
RAB3A-203ENST00000481914 BICRAQ9NZM4 1560 aa23.83■■□□□ 1.41
RAB3A-203ENST00000481914 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
RAB3A-203ENST00000481914 SCRIBQ14160 1630 aa23.68■■□□□ 1.38
RAB3A-203ENST00000481914 SHROOM4Q9ULL8 1493 aa23.49■■□□□ 1.35
RAB3A-203ENST00000481914 EIF4G1Q04637 1599 aaKnown RBP23.2■■□□□ 1.3
RAB3A-203ENST00000481914 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
RAB3A-203ENST00000481914 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
RAB3A-203ENST00000481914 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
RAB3A-203ENST00000481914 NCAPD3P42695 1498 aa22.59■■□□□ 1.21
RAB3A-203ENST00000481914 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
RAB3A-203ENST00000481914 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
RAB3A-203ENST00000481914 SMARCA2P51531 1590 aa22.48■■□□□ 1.19
RAB3A-203ENST00000481914 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
RAB3A-203ENST00000481914 HMGXB3Q12766 1538 aa22.43■■□□□ 1.18
RAB3A-203ENST00000481914 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
RAB3A-203ENST00000481914 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
RAB3A-203ENST00000481914 WIZO95785 1651 aa22.18■■□□□ 1.14
RAB3A-203ENST00000481914 NESP48681 1621 aa22.13■■□□□ 1.13
RAB3A-203ENST00000481914 RSF1Q96T23 1441 aaPredicted RBP22.13■■□□□ 1.13
RAB3A-203ENST00000481914 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
RAB3A-203ENST00000481914 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
RAB3A-203ENST00000481914 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
RAB3A-203ENST00000481914 CADPSQ9ULU8 1353 aa21.91■■□□□ 1.1
RAB3A-203ENST00000481914 CUX2O14529 1486 aa21.9■■□□□ 1.1
RAB3A-203ENST00000481914 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
RAB3A-203ENST00000481914 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
RAB3A-203ENST00000481914 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
RAB3A-203ENST00000481914 CFTRP13569 1480 aa21.74■■□□□ 1.07
RAB3A-203ENST00000481914 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
RAB3A-203ENST00000481914 FANCD2Q9BXW9 1451 aa21.66■■□□□ 1.06
RAB3A-203ENST00000481914 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
RAB3A-203ENST00000481914 CEP164Q9UPV0 1460 aa21.64■■□□□ 1.05
RAB3A-203ENST00000481914 WDR62O43379 1518 aa21.6■■□□□ 1.05
RAB3A-203ENST00000481914 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
RAB3A-203ENST00000481914 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
RAB3A-203ENST00000481914 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
RAB3A-203ENST00000481914 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
RAB3A-203ENST00000481914 TOPBP1Q92547 1522 aa21.29■■□□□ 1
RAB3A-203ENST00000481914 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
RAB3A-203ENST00000481914 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
RAB3A-203ENST00000481914 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
RAB3A-203ENST00000481914 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
RAB3A-203ENST00000481914 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
RAB3A-203ENST00000481914 CUX1P39880 1505 aa21.08■□□□□ 0.96
RAB3A-203ENST00000481914 TARBP1Q13395 1621 aaKnown RBP21.07■□□□□ 0.96
RAB3A-203ENST00000481914 RAD54L2Q9Y4B4 1467 aa21.04■□□□□ 0.96
RAB3A-203ENST00000481914 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
RAB3A-203ENST00000481914 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
RAB3A-203ENST00000481914 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
RAB3A-203ENST00000481914 SOGA1O94964 1423 aa21■□□□□ 0.95
RAB3A-203ENST00000481914 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
RAB3A-203ENST00000481914 TDRD9Q8NDG6 1382 aaKnown RBP20.94■□□□□ 0.94
RAB3A-203ENST00000481914 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
RAB3A-203ENST00000481914 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
RAB3A-203ENST00000481914 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
RAB3A-203ENST00000481914 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
RAB3A-203ENST00000481914 SNAPC4Q5SXM2 1469 aa20.8■□□□□ 0.92
RAB3A-203ENST00000481914 ABCA10Q8WWZ4 1543 aa20.79■□□□□ 0.92
RAB3A-203ENST00000481914 BIVM-ERCC5R4GMW8 1640 aa20.79■□□□□ 0.92
RAB3A-203ENST00000481914 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
RAB3A-203ENST00000481914 CHD1O14646 1710 aa20.77■□□□□ 0.92
RAB3A-203ENST00000481914 FBLN2P98095 1184 aa20.75■□□□□ 0.91
RAB3A-203ENST00000481914 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
RAB3A-203ENST00000481914 ABCA5Q8WWZ7 1642 aa20.74■□□□□ 0.91
RAB3A-203ENST00000481914 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
RAB3A-203ENST00000481914 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
RAB3A-203ENST00000481914 PBRM1Q86U86 1689 aa20.68■□□□□ 0.9
RAB3A-203ENST00000481914 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
RAB3A-203ENST00000481914 RIMBP3CA6NJZ7 1639 aa20.65■□□□□ 0.9
RAB3A-203ENST00000481914 RIMBP3BA6NNM3 1639 aa20.65■□□□□ 0.9
RAB3A-203ENST00000481914 RIMBP3Q9UFD9 1639 aa20.65■□□□□ 0.9
RAB3A-203ENST00000481914 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
RAB3A-203ENST00000481914 CHMP7Q8WUX9 453 aaPredicted RBP20.65■□□□□ 0.9
RAB3A-203ENST00000481914 CLASP1Q7Z460 1538 aa20.59■□□□□ 0.89
RAB3A-203ENST00000481914 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
RAB3A-203ENST00000481914 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
RAB3A-203ENST00000481914 GRIN2AQ12879 1464 aa20.52■□□□□ 0.88
RAB3A-203ENST00000481914 FHAD1B1AJZ9 1412 aa20.5■□□□□ 0.87
RAB3A-203ENST00000481914 ARAP1Q96P48 1450 aa20.5■□□□□ 0.87
RAB3A-203ENST00000481914 CYB5RLQ6IPT4 315 aa20.46■□□□□ 0.87
RAB3A-203ENST00000481914 NUP160Q12769 1436 aa20.44■□□□□ 0.86
RAB3A-203ENST00000481914 CEP170Q5SW79 1584 aa20.44■□□□□ 0.86
RAB3A-203ENST00000481914 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
RAB3A-203ENST00000481914 IGF1RP08069 1367 aa20.39■□□□□ 0.85
RAB3A-203ENST00000481914 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.84
RAB3A-203ENST00000481914 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
RAB3A-203ENST00000481914 CUL7Q14999 1698 aa20.27■□□□□ 0.84
RAB3A-203ENST00000481914 RUSC2Q8N2Y8 1516 aa20.26■□□□□ 0.83
RAB3A-203ENST00000481914 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 340.3 ms