RNA–Protein interactions for RNA: ENST00000481851.1

CSRP1-205, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 741 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-205ENST00000481851 NISCHQ9Y2I1 1504 aa36.24■■■■□ 3.39
CSRP1-205ENST00000481851 CCDC180Q9P1Z9 1646 aa32.34■■■□□ 2.77
CSRP1-205ENST00000481851 ABCC9O60706 1549 aa31.95■■■□□ 2.7
CSRP1-205ENST00000481851 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
CSRP1-205ENST00000481851 NACADO15069 1562 aa30.51■■■□□ 2.47
CSRP1-205ENST00000481851 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
CSRP1-205ENST00000481851 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
CSRP1-205ENST00000481851 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
CSRP1-205ENST00000481851 DCAF1Q9Y4B6 1507 aa30.01■■■□□ 2.39
CSRP1-205ENST00000481851 UNC13AQ9UPW8 1703 aa29.89■■■□□ 2.38
CSRP1-205ENST00000481851 PABPN1Q86U42 306 aaKnown RBP eCLIP29.81■■■□□ 2.36
CSRP1-205ENST00000481851 BICRAQ9NZM4 1560 aa29.72■■■□□ 2.35
CSRP1-205ENST00000481851 DNAJC5BQ9UF47 199 aa29.69■■■□□ 2.34
CSRP1-205ENST00000481851 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
CSRP1-205ENST00000481851 SHROOM4Q9ULL8 1493 aa29.38■■■□□ 2.29
CSRP1-205ENST00000481851 EIF4G1Q04637 1599 aaKnown RBP28.93■■■□□ 2.22
CSRP1-205ENST00000481851 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
CSRP1-205ENST00000481851 CECR2Q9BXF3 1484 aa28.76■■■□□ 2.19
CSRP1-205ENST00000481851 NCAPD3P42695 1498 aa28.19■■■□□ 2.1
CSRP1-205ENST00000481851 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
CSRP1-205ENST00000481851 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
CSRP1-205ENST00000481851 BAZ1AQ9NRL2 1556 aaPredicted RBP28.1■■■□□ 2.09
CSRP1-205ENST00000481851 SMARCA2P51531 1590 aa28.06■■■□□ 2.08
CSRP1-205ENST00000481851 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
CSRP1-205ENST00000481851 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
CSRP1-205ENST00000481851 MROH2BQ7Z745 1585 aa27.92■■■□□ 2.06
CSRP1-205ENST00000481851 BAZ1BQ9UIG0 1483 aaKnown RBP27.84■■■□□ 2.05
CSRP1-205ENST00000481851 WIZO95785 1651 aa27.57■■■□□ 2
CSRP1-205ENST00000481851 NESP48681 1621 aa27.56■■■□□ 2
CSRP1-205ENST00000481851 ERCC6Q03468 1493 aa27.54■■■□□ 2
CSRP1-205ENST00000481851 RSF1Q96T23 1441 aaPredicted RBP27.5■■□□□ 1.99
CSRP1-205ENST00000481851 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
CSRP1-205ENST00000481851 CUX2O14529 1486 aa27.41■■□□□ 1.98
CSRP1-205ENST00000481851 CADPSQ9ULU8 1353 aa27.34■■□□□ 1.97
CSRP1-205ENST00000481851 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
CSRP1-205ENST00000481851 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
CSRP1-205ENST00000481851 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.94
CSRP1-205ENST00000481851 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
CSRP1-205ENST00000481851 CFTRP13569 1480 aa27.11■■□□□ 1.93
CSRP1-205ENST00000481851 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
CSRP1-205ENST00000481851 DNAJC5Q9H3Z4 198 aa27.01■■□□□ 1.91
CSRP1-205ENST00000481851 FANCD2Q9BXW9 1451 aa26.99■■□□□ 1.91
CSRP1-205ENST00000481851 CCDC88BA6NC98 1476 aa26.98■■□□□ 1.91
CSRP1-205ENST00000481851 CEP164Q9UPV0 1460 aa26.97■■□□□ 1.91
CSRP1-205ENST00000481851 WDR62O43379 1518 aa26.95■■□□□ 1.9
CSRP1-205ENST00000481851 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
CSRP1-205ENST00000481851 URB2Q14146 1524 aaKnown RBP26.75■■□□□ 1.87
CSRP1-205ENST00000481851 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
CSRP1-205ENST00000481851 ABCC8Q09428 1581 aa26.53■■□□□ 1.84
CSRP1-205ENST00000481851 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
CSRP1-205ENST00000481851 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
CSRP1-205ENST00000481851 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
CSRP1-205ENST00000481851 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
CSRP1-205ENST00000481851 POLA1P09884 1462 aaPredicted RBP26.28■■□□□ 1.8
CSRP1-205ENST00000481851 TARBP1Q13395 1621 aaKnown RBP26.27■■□□□ 1.8
CSRP1-205ENST00000481851 OSCARQ8IYS5 282 aa26.25■■□□□ 1.79
CSRP1-205ENST00000481851 CUX1P39880 1505 aa26.2■■□□□ 1.79
CSRP1-205ENST00000481851 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.78
CSRP1-205ENST00000481851 SOGA1O94964 1423 aa26.17■■□□□ 1.78
CSRP1-205ENST00000481851 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.78
CSRP1-205ENST00000481851 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
CSRP1-205ENST00000481851 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
CSRP1-205ENST00000481851 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
CSRP1-205ENST00000481851 WDR97A6NE52 1622 aa26.04■■□□□ 1.76
CSRP1-205ENST00000481851 CHD1O14646 1710 aa25.92■■□□□ 1.74
CSRP1-205ENST00000481851 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
CSRP1-205ENST00000481851 ABCA10Q8WWZ4 1543 aa25.91■■□□□ 1.74
CSRP1-205ENST00000481851 GRIN2BQ13224 1484 aa25.9■■□□□ 1.74
CSRP1-205ENST00000481851 TOP2BQ02880 1626 aa25.89■■□□□ 1.74
CSRP1-205ENST00000481851 SNAPC4Q5SXM2 1469 aa25.89■■□□□ 1.73
CSRP1-205ENST00000481851 FBLN2P98095 1184 aa25.88■■□□□ 1.73
CSRP1-205ENST00000481851 TRIM41Q8WV44 630 aa25.88■■□□□ 1.73
CSRP1-205ENST00000481851 BIVM-ERCC5R4GMW8 1640 aa25.88■■□□□ 1.73
CSRP1-205ENST00000481851 MAGI1Q96QZ7 1491 aaPredicted RBP25.86■■□□□ 1.73
CSRP1-205ENST00000481851 GAPVD1Q14C86 1478 aa25.85■■□□□ 1.73
CSRP1-205ENST00000481851 SYNJ1O43426 1573 aa25.85■■□□□ 1.73
CSRP1-205ENST00000481851 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
CSRP1-205ENST00000481851 RIMBP3CA6NJZ7 1639 aa25.81■■□□□ 1.72
CSRP1-205ENST00000481851 RIMBP3BA6NNM3 1639 aa25.81■■□□□ 1.72
CSRP1-205ENST00000481851 RIMBP3Q9UFD9 1639 aa25.81■■□□□ 1.72
CSRP1-205ENST00000481851 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
CSRP1-205ENST00000481851 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
CSRP1-205ENST00000481851 PBRM1Q86U86 1689 aa25.77■■□□□ 1.72
CSRP1-205ENST00000481851 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
CSRP1-205ENST00000481851 CLASP1Q7Z460 1538 aa25.68■■□□□ 1.7
CSRP1-205ENST00000481851 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.69
CSRP1-205ENST00000481851 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
CSRP1-205ENST00000481851 ADAMTS12P58397 1594 aa25.57■■□□□ 1.68
CSRP1-205ENST00000481851 GRIN2AQ12879 1464 aa25.56■■□□□ 1.68
CSRP1-205ENST00000481851 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
CSRP1-205ENST00000481851 FHAD1B1AJZ9 1412 aa25.55■■□□□ 1.68
CSRP1-205ENST00000481851 NUP160Q12769 1436 aa25.49■■□□□ 1.67
CSRP1-205ENST00000481851 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
CSRP1-205ENST00000481851 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
CSRP1-205ENST00000481851 IGF1RP08069 1367 aa25.38■■□□□ 1.65
CSRP1-205ENST00000481851 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
CSRP1-205ENST00000481851 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
CSRP1-205ENST00000481851 CUL7Q14999 1698 aa25.26■■□□□ 1.63
CSRP1-205ENST00000481851 JPH4Q96JJ6 628 aa25.23■■□□□ 1.63
CSRP1-205ENST00000481851 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms