RNA–Protein interactions for RNA: ENST00000481743.1

GATA3-204, Transcript of GATA binding protein 3, humanhuman

TSL 2

Gene GATA3, Length 442 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATA3-204ENST00000481743 NISCHQ9Y2I1 1504 aa46.81■■■■■ 5.08
GATA3-204ENST00000481743 CCDC180Q9P1Z9 1646 aa41.95■■■■■ 4.31
GATA3-204ENST00000481743 ABCC9O60706 1549 aa41.29■■■■■ 4.2
GATA3-204ENST00000481743 RB1CC1Q8TDY2 1594 aa39.59■■■■□ 3.93
GATA3-204ENST00000481743 NACADO15069 1562 aa39.42■■■■□ 3.9
GATA3-204ENST00000481743 DCAF8L2P0C7V8 631 aa39.12■■■■□ 3.85
GATA3-204ENST00000481743 MYO15BQ96JP2 1530 aa39.02■■■■□ 3.84
GATA3-204ENST00000481743 ZCCHC6Q5VYS8 1495 aaKnown RBP38.96■■■■□ 3.83
GATA3-204ENST00000481743 UNC13AQ9UPW8 1703 aa38.87■■■■□ 3.81
GATA3-204ENST00000481743 DCAF1Q9Y4B6 1507 aa38.72■■■■□ 3.79
GATA3-204ENST00000481743 BICRAQ9NZM4 1560 aa38.42■■■■□ 3.74
GATA3-204ENST00000481743 PABPN1Q86U42 306 aaKnown RBP eCLIP38.41■■■■□ 3.74
GATA3-204ENST00000481743 SCRIBQ14160 1630 aa38.22■■■■□ 3.71
GATA3-204ENST00000481743 DNAJC5BQ9UF47 199 aa38.12■■■■□ 3.69
GATA3-204ENST00000481743 SHROOM4Q9ULL8 1493 aa37.96■■■■□ 3.67
GATA3-204ENST00000481743 EIF4G1Q04637 1599 aaKnown RBP37.44■■■■□ 3.58
GATA3-204ENST00000481743 CC2D2AQ9P2K1 1620 aa37.39■■■■□ 3.58
GATA3-204ENST00000481743 CECR2Q9BXF3 1484 aa37.13■■■■□ 3.54
GATA3-204ENST00000481743 SMARCA4P51532 1647 aa36.5■■■■□ 3.43
GATA3-204ENST00000481743 BAZ1AQ9NRL2 1556 aaPredicted RBP36.35■■■■□ 3.41
GATA3-204ENST00000481743 NCAPD3P42695 1498 aa36.3■■■■□ 3.4
GATA3-204ENST00000481743 SMARCA2P51531 1590 aa36.29■■■■□ 3.4
GATA3-204ENST00000481743 ATAD2BQ9ULI0 1458 aa36.29■■■■□ 3.4
GATA3-204ENST00000481743 HMGXB3Q12766 1538 aa36.2■■■■□ 3.39
GATA3-204ENST00000481743 PEG3Q9GZU2 1588 aa36.11■■■■□ 3.37
GATA3-204ENST00000481743 MROH2BQ7Z745 1585 aa36.09■■■■□ 3.37
GATA3-204ENST00000481743 BAZ1BQ9UIG0 1483 aaKnown RBP36.02■■■■□ 3.36
GATA3-204ENST00000481743 WIZO95785 1651 aa35.75■■■■□ 3.31
GATA3-204ENST00000481743 ERCC6Q03468 1493 aa35.64■■■■□ 3.3
GATA3-204ENST00000481743 NESP48681 1621 aa35.62■■■■□ 3.29
GATA3-204ENST00000481743 LAMC3Q9Y6N6 1575 aa35.52■■■■□ 3.28
GATA3-204ENST00000481743 RSF1Q96T23 1441 aaPredicted RBP35.46■■■■□ 3.27
GATA3-204ENST00000481743 CUX2O14529 1486 aa35.4■■■■□ 3.26
GATA3-204ENST00000481743 KIF21AQ7Z4S6 1674 aa35.34■■■■□ 3.25
GATA3-204ENST00000481743 TOP2AP11388 1531 aaKnown RBP35.32■■■■□ 3.25
GATA3-204ENST00000481743 THOC2Q8NI27 1593 aaKnown RBP35.28■■■■□ 3.24
GATA3-204ENST00000481743 PDS5BQ9NTI5 1447 aa35.19■■■■□ 3.22
GATA3-204ENST00000481743 CADPSQ9ULU8 1353 aa35.19■■■■□ 3.22
GATA3-204ENST00000481743 CFTRP13569 1480 aa34.95■■■■□ 3.19
GATA3-204ENST00000481743 PRDM2Q13029 1718 aa34.93■■■■□ 3.18
GATA3-204ENST00000481743 MRC2Q9UBG0 1479 aa34.92■■■■□ 3.18
GATA3-204ENST00000481743 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
GATA3-204ENST00000481743 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
GATA3-204ENST00000481743 WDR62O43379 1518 aa34.86■■■■□ 3.17
GATA3-204ENST00000481743 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
GATA3-204ENST00000481743 DNAJC5Q9H3Z4 198 aa34.62■■■■□ 3.13
GATA3-204ENST00000481743 URB2Q14146 1524 aaKnown RBP34.57■■■■□ 3.12
GATA3-204ENST00000481743 TOPBP1Q92547 1522 aa34.29■■■■□ 3.08
GATA3-204ENST00000481743 DNMBPQ6XZF7 1577 aa34.26■■■■□ 3.07
GATA3-204ENST00000481743 ABCC8Q09428 1581 aa34.21■■■■□ 3.07
GATA3-204ENST00000481743 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
GATA3-204ENST00000481743 IFT140Q96RY7 1462 aa34.14■■■■□ 3.06
GATA3-204ENST00000481743 ZNF608Q9ULD9 1512 aaPredicted RBP34.04■■■■□ 3.04
GATA3-204ENST00000481743 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
GATA3-204ENST00000481743 TARBP1Q13395 1621 aaKnown RBP34■■■■□ 3.03
GATA3-204ENST00000481743 POLA1P09884 1462 aaPredicted RBP33.97■■■■□ 3.03
GATA3-204ENST00000481743 CUX1P39880 1505 aa33.89■■■■□ 3.02
GATA3-204ENST00000481743 FGD5Q6ZNL6 1462 aa33.84■■■■□ 3.01
GATA3-204ENST00000481743 RAD54L2Q9Y4B4 1467 aa33.79■■■■□ 3
GATA3-204ENST00000481743 AQRO60306 1485 aaKnown RBP eCLIP33.75■■■□□ 2.99
GATA3-204ENST00000481743 SOGA1O94964 1423 aa33.74■■■□□ 2.99
GATA3-204ENST00000481743 WDR97A6NE52 1622 aa33.72■■■□□ 2.99
GATA3-204ENST00000481743 CHD1O14646 1710 aa33.71■■■□□ 2.99
GATA3-204ENST00000481743 OSCARQ8IYS5 282 aa33.71■■■□□ 2.99
GATA3-204ENST00000481743 TDRD9Q8NDG6 1382 aaKnown RBP33.6■■■□□ 2.97
GATA3-204ENST00000481743 BIVM-ERCC5R4GMW8 1640 aa33.58■■■□□ 2.97
GATA3-204ENST00000481743 PBRM1Q86U86 1689 aa33.55■■■□□ 2.96
GATA3-204ENST00000481743 TOP2BQ02880 1626 aa33.53■■■□□ 2.96
GATA3-204ENST00000481743 SYNJ1O43426 1573 aa33.51■■■□□ 2.96
GATA3-204ENST00000481743 SNAPC4Q5SXM2 1469 aa33.5■■■□□ 2.95
GATA3-204ENST00000481743 WRNQ14191 1432 aaPredicted RBP eCLIP33.48■■■□□ 2.95
GATA3-204ENST00000481743 ABCA5Q8WWZ7 1642 aa33.47■■■□□ 2.95
GATA3-204ENST00000481743 ABCA10Q8WWZ4 1543 aa33.47■■■□□ 2.95
GATA3-204ENST00000481743 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
GATA3-204ENST00000481743 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
GATA3-204ENST00000481743 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
GATA3-204ENST00000481743 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
GATA3-204ENST00000481743 MAGI1Q96QZ7 1491 aaPredicted RBP33.44■■■□□ 2.94
GATA3-204ENST00000481743 GAPVD1Q14C86 1478 aa33.39■■■□□ 2.94
GATA3-204ENST00000481743 TRIM41Q8WV44 630 aa33.38■■■□□ 2.93
GATA3-204ENST00000481743 FBLN2P98095 1184 aa33.37■■■□□ 2.93
GATA3-204ENST00000481743 ARHGEF11O15085 1522 aa33.34■■■□□ 2.93
GATA3-204ENST00000481743 SYNJ2O15056 1496 aa33.29■■■□□ 2.92
GATA3-204ENST00000481743 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
GATA3-204ENST00000481743 CHMP7Q8WUX9 453 aaPredicted RBP33.2■■■□□ 2.91
GATA3-204ENST00000481743 ADAMTS12P58397 1594 aa33.18■■■□□ 2.9
GATA3-204ENST00000481743 ERICH3Q5RHP9 1530 aa33.08■■■□□ 2.89
GATA3-204ENST00000481743 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
GATA3-204ENST00000481743 ARAP1Q96P48 1450 aa33.04■■■□□ 2.88
GATA3-204ENST00000481743 FHAD1B1AJZ9 1412 aa32.98■■■□□ 2.87
GATA3-204ENST00000481743 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
GATA3-204ENST00000481743 CYB5RLQ6IPT4 315 aa32.9■■■□□ 2.86
GATA3-204ENST00000481743 NUP160Q12769 1436 aa32.88■■■□□ 2.85
GATA3-204ENST00000481743 CUL7Q14999 1698 aa32.79■■■□□ 2.84
GATA3-204ENST00000481743 KIF27Q86VH2 1401 aa32.79■■■□□ 2.84
GATA3-204ENST00000481743 SHROOM2Q13796 1616 aa32.79■■■□□ 2.84
GATA3-204ENST00000481743 ERCC6L2Q5T890 1561 aa32.74■■■□□ 2.83
GATA3-204ENST00000481743 RUSC2Q8N2Y8 1516 aa32.72■■■□□ 2.83
GATA3-204ENST00000481743 IGF1RP08069 1367 aa32.63■■■□□ 2.81
GATA3-204ENST00000481743 PRG4Q92954 1404 aaPredicted RBP32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms