RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
LINC00544-202ENST00000481738 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
LINC00544-202ENST00000481738 ABCC9O60706 1549 aa19.42■□□□□ 0.7
LINC00544-202ENST00000481738 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
LINC00544-202ENST00000481738 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
LINC00544-202ENST00000481738 NACADO15069 1562 aa18.53■□□□□ 0.56
LINC00544-202ENST00000481738 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
LINC00544-202ENST00000481738 ZCCHC6Q5VYS8 1495 aaKnown RBP18.35■□□□□ 0.53
LINC00544-202ENST00000481738 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
LINC00544-202ENST00000481738 UNC13AQ9UPW8 1703 aa18.18■□□□□ 0.5
LINC00544-202ENST00000481738 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
LINC00544-202ENST00000481738 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
LINC00544-202ENST00000481738 SCRIBQ14160 1630 aa17.97■□□□□ 0.47
LINC00544-202ENST00000481738 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
LINC00544-202ENST00000481738 SHROOM4Q9ULL8 1493 aa17.8■□□□□ 0.44
LINC00544-202ENST00000481738 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
LINC00544-202ENST00000481738 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
LINC00544-202ENST00000481738 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
LINC00544-202ENST00000481738 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
LINC00544-202ENST00000481738 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
LINC00544-202ENST00000481738 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
LINC00544-202ENST00000481738 ATAD2BQ9ULI0 1458 aa17.1■□□□□ 0.33
LINC00544-202ENST00000481738 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
LINC00544-202ENST00000481738 MROH2BQ7Z745 1585 aa17.02■□□□□ 0.31
LINC00544-202ENST00000481738 HMGXB3Q12766 1538 aa17■□□□□ 0.31
LINC00544-202ENST00000481738 PEG3Q9GZU2 1588 aa16.97■□□□□ 0.31
LINC00544-202ENST00000481738 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
LINC00544-202ENST00000481738 WIZO95785 1651 aa16.84■□□□□ 0.29
LINC00544-202ENST00000481738 NESP48681 1621 aa16.77■□□□□ 0.27
LINC00544-202ENST00000481738 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
LINC00544-202ENST00000481738 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
LINC00544-202ENST00000481738 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
LINC00544-202ENST00000481738 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
LINC00544-202ENST00000481738 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
LINC00544-202ENST00000481738 CUX2O14529 1486 aa16.6■□□□□ 0.25
LINC00544-202ENST00000481738 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
LINC00544-202ENST00000481738 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
LINC00544-202ENST00000481738 THOC2Q8NI27 1593 aaKnown RBP16.52■□□□□ 0.24
LINC00544-202ENST00000481738 CFTRP13569 1480 aa16.47■□□□□ 0.23
LINC00544-202ENST00000481738 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
LINC00544-202ENST00000481738 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
LINC00544-202ENST00000481738 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
LINC00544-202ENST00000481738 CEP164Q9UPV0 1460 aa16.42■□□□□ 0.22
LINC00544-202ENST00000481738 WDR62O43379 1518 aa16.36■□□□□ 0.21
LINC00544-202ENST00000481738 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
LINC00544-202ENST00000481738 SUPT5HO00267 1087 aaKnown RBP16.28■□□□□ 0.2
LINC00544-202ENST00000481738 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
LINC00544-202ENST00000481738 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
LINC00544-202ENST00000481738 TOPBP1Q92547 1522 aa16.14■□□□□ 0.18
LINC00544-202ENST00000481738 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
LINC00544-202ENST00000481738 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
LINC00544-202ENST00000481738 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
LINC00544-202ENST00000481738 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
LINC00544-202ENST00000481738 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
LINC00544-202ENST00000481738 CUX1P39880 1505 aa15.97■□□□□ 0.15
LINC00544-202ENST00000481738 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
LINC00544-202ENST00000481738 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
LINC00544-202ENST00000481738 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
LINC00544-202ENST00000481738 EIF4G3O43432 1585 aaKnown RBP15.95■□□□□ 0.14
LINC00544-202ENST00000481738 SOGA1O94964 1423 aa15.94■□□□□ 0.14
LINC00544-202ENST00000481738 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.14
LINC00544-202ENST00000481738 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
LINC00544-202ENST00000481738 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
LINC00544-202ENST00000481738 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
LINC00544-202ENST00000481738 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
LINC00544-202ENST00000481738 CHD1O14646 1710 aa15.79■□□□□ 0.12
LINC00544-202ENST00000481738 TOP2BQ02880 1626 aa15.79■□□□□ 0.12
LINC00544-202ENST00000481738 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
LINC00544-202ENST00000481738 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
LINC00544-202ENST00000481738 FBLN2P98095 1184 aa15.78■□□□□ 0.12
LINC00544-202ENST00000481738 ABCA10Q8WWZ4 1543 aa15.77■□□□□ 0.11
LINC00544-202ENST00000481738 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
LINC00544-202ENST00000481738 GRIN2BQ13224 1484 aa15.76■□□□□ 0.11
LINC00544-202ENST00000481738 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
LINC00544-202ENST00000481738 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
LINC00544-202ENST00000481738 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
LINC00544-202ENST00000481738 MAGI1Q96QZ7 1491 aaPredicted RBP15.72■□□□□ 0.11
LINC00544-202ENST00000481738 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
LINC00544-202ENST00000481738 CHMP7Q8WUX9 453 aaPredicted RBP15.69■□□□□ 0.1
LINC00544-202ENST00000481738 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
LINC00544-202ENST00000481738 RIMBP3CA6NJZ7 1639 aa15.67■□□□□ 0.1
LINC00544-202ENST00000481738 RIMBP3BA6NNM3 1639 aa15.67■□□□□ 0.1
LINC00544-202ENST00000481738 RIMBP3Q9UFD9 1639 aa15.67■□□□□ 0.1
LINC00544-202ENST00000481738 ARHGEF11O15085 1522 aa15.64■□□□□ 0.09
LINC00544-202ENST00000481738 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
LINC00544-202ENST00000481738 ADAMTS12P58397 1594 aa15.58■□□□□ 0.09
LINC00544-202ENST00000481738 ERICH3Q5RHP9 1530 aa15.57■□□□□ 0.08
LINC00544-202ENST00000481738 GRIN2AQ12879 1464 aa15.55■□□□□ 0.08
LINC00544-202ENST00000481738 FHAD1B1AJZ9 1412 aa15.55■□□□□ 0.08
LINC00544-202ENST00000481738 CYB5RLQ6IPT4 315 aa15.52■□□□□ 0.08
LINC00544-202ENST00000481738 ARAP1Q96P48 1450 aa15.51■□□□□ 0.07
LINC00544-202ENST00000481738 NUP160Q12769 1436 aa15.49■□□□□ 0.07
LINC00544-202ENST00000481738 KIF27Q86VH2 1401 aa15.49■□□□□ 0.07
LINC00544-202ENST00000481738 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
LINC00544-202ENST00000481738 IGF1RP08069 1367 aa15.44■□□□□ 0.06
LINC00544-202ENST00000481738 CUL7Q14999 1698 aa15.41■□□□□ 0.06
LINC00544-202ENST00000481738 ERCC6L2Q5T890 1561 aa15.39■□□□□ 0.05
LINC00544-202ENST00000481738 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
LINC00544-202ENST00000481738 RUSC2Q8N2Y8 1516 aa15.36■□□□□ 0.05
LINC00544-202ENST00000481738 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms