RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 NISCHQ9Y2I1 1504 aa42.69■■■■■ 4.42
SMIM11A-205ENST00000481710 CCDC180Q9P1Z9 1646 aa37.99■■■■□ 3.67
SMIM11A-205ENST00000481710 ABCC9O60706 1549 aa36.9■■■■□ 3.5
SMIM11A-205ENST00000481710 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
SMIM11A-205ENST00000481710 RB1CC1Q8TDY2 1594 aa35.59■■■■□ 3.29
SMIM11A-205ENST00000481710 NACADO15069 1562 aa35.56■■■■□ 3.28
SMIM11A-205ENST00000481710 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
SMIM11A-205ENST00000481710 MYO15BQ96JP2 1530 aa35.38■■■■□ 3.25
SMIM11A-205ENST00000481710 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.25
SMIM11A-205ENST00000481710 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
SMIM11A-205ENST00000481710 SCRIBQ14160 1630 aa34.66■■■■□ 3.14
SMIM11A-205ENST00000481710 BICRAQ9NZM4 1560 aa34.57■■■■□ 3.12
SMIM11A-205ENST00000481710 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.1
SMIM11A-205ENST00000481710 SHROOM4Q9ULL8 1493 aa34.11■■■■□ 3.05
SMIM11A-205ENST00000481710 DNAJC5BQ9UF47 199 aa33.63■■■□□ 2.97
SMIM11A-205ENST00000481710 EIF4G1Q04637 1599 aaKnown RBP33.6■■■□□ 2.97
SMIM11A-205ENST00000481710 CC2D2AQ9P2K1 1620 aa33.44■■■□□ 2.94
SMIM11A-205ENST00000481710 CECR2Q9BXF3 1484 aa33.25■■■□□ 2.91
SMIM11A-205ENST00000481710 SMARCA4P51532 1647 aa33.16■■■□□ 2.9
SMIM11A-205ENST00000481710 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
SMIM11A-205ENST00000481710 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
SMIM11A-205ENST00000481710 ATAD2BQ9ULI0 1458 aa32.85■■■□□ 2.85
SMIM11A-205ENST00000481710 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
SMIM11A-205ENST00000481710 PEG3Q9GZU2 1588 aa32.8■■■□□ 2.84
SMIM11A-205ENST00000481710 NCAPD3P42695 1498 aa32.76■■■□□ 2.84
SMIM11A-205ENST00000481710 HMGXB3Q12766 1538 aa32.71■■■□□ 2.83
SMIM11A-205ENST00000481710 WIZO95785 1651 aa32.66■■■□□ 2.82
SMIM11A-205ENST00000481710 BAZ1BQ9UIG0 1483 aaKnown RBP32.6■■■□□ 2.81
SMIM11A-205ENST00000481710 RSF1Q96T23 1441 aaPredicted RBP32.55■■■□□ 2.8
SMIM11A-205ENST00000481710 TOP2AP11388 1531 aaKnown RBP32.26■■■□□ 2.76
SMIM11A-205ENST00000481710 NESP48681 1621 aa32.01■■■□□ 2.72
SMIM11A-205ENST00000481710 LAMC3Q9Y6N6 1575 aa31.95■■■□□ 2.71
SMIM11A-205ENST00000481710 CCDC88BA6NC98 1476 aa31.83■■■□□ 2.69
SMIM11A-205ENST00000481710 SUPT5HO00267 1087 aaKnown RBP31.79■■■□□ 2.68
SMIM11A-205ENST00000481710 CADPSQ9ULU8 1353 aa31.79■■■□□ 2.68
SMIM11A-205ENST00000481710 KIF21AQ7Z4S6 1674 aa31.76■■■□□ 2.68
SMIM11A-205ENST00000481710 ERCC6Q03468 1493 aa31.75■■■□□ 2.67
SMIM11A-205ENST00000481710 PRDM2Q13029 1718 aa31.7■■■□□ 2.67
SMIM11A-205ENST00000481710 CFTRP13569 1480 aa31.69■■■□□ 2.66
SMIM11A-205ENST00000481710 PDS5BQ9NTI5 1447 aa31.62■■■□□ 2.65
SMIM11A-205ENST00000481710 THOC2Q8NI27 1593 aaKnown RBP31.57■■■□□ 2.64
SMIM11A-205ENST00000481710 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
SMIM11A-205ENST00000481710 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.62
SMIM11A-205ENST00000481710 MRC2Q9UBG0 1479 aa31.37■■■□□ 2.61
SMIM11A-205ENST00000481710 CUX2O14529 1486 aa31.36■■■□□ 2.61
SMIM11A-205ENST00000481710 WDR62O43379 1518 aa31.29■■■□□ 2.6
SMIM11A-205ENST00000481710 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
SMIM11A-205ENST00000481710 DNMBPQ6XZF7 1577 aa31.05■■■□□ 2.56
SMIM11A-205ENST00000481710 TOPBP1Q92547 1522 aa31.03■■■□□ 2.56
SMIM11A-205ENST00000481710 ABCC8Q09428 1581 aa30.96■■■□□ 2.55
SMIM11A-205ENST00000481710 CUX1P39880 1505 aa30.89■■■□□ 2.54
SMIM11A-205ENST00000481710 POLA1P09884 1462 aaPredicted RBP30.78■■■□□ 2.52
SMIM11A-205ENST00000481710 TARBP1Q13395 1621 aaKnown RBP30.75■■■□□ 2.51
SMIM11A-205ENST00000481710 IFT140Q96RY7 1462 aa30.75■■■□□ 2.51
SMIM11A-205ENST00000481710 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
SMIM11A-205ENST00000481710 FGD5Q6ZNL6 1462 aa30.74■■■□□ 2.51
SMIM11A-205ENST00000481710 SYNJ1O43426 1573 aa30.72■■■□□ 2.51
SMIM11A-205ENST00000481710 TOP2BQ02880 1626 aa30.69■■■□□ 2.5
SMIM11A-205ENST00000481710 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
SMIM11A-205ENST00000481710 ZNF608Q9ULD9 1512 aaPredicted RBP30.64■■■□□ 2.5
SMIM11A-205ENST00000481710 RAD54L2Q9Y4B4 1467 aa30.63■■■□□ 2.49
SMIM11A-205ENST00000481710 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
SMIM11A-205ENST00000481710 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
SMIM11A-205ENST00000481710 SOGA1O94964 1423 aa30.58■■■□□ 2.49
SMIM11A-205ENST00000481710 AQRO60306 1485 aaKnown RBP eCLIP30.45■■■□□ 2.47
SMIM11A-205ENST00000481710 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
SMIM11A-205ENST00000481710 TDRD9Q8NDG6 1382 aaKnown RBP30.4■■■□□ 2.46
SMIM11A-205ENST00000481710 ABCA5Q8WWZ7 1642 aa30.39■■■□□ 2.46
SMIM11A-205ENST00000481710 PBRM1Q86U86 1689 aa30.38■■■□□ 2.45
SMIM11A-205ENST00000481710 GAPVD1Q14C86 1478 aa30.27■■■□□ 2.44
SMIM11A-205ENST00000481710 CHD1O14646 1710 aa30.26■■■□□ 2.43
SMIM11A-205ENST00000481710 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
SMIM11A-205ENST00000481710 SNAPC4Q5SXM2 1469 aa30.22■■■□□ 2.43
SMIM11A-205ENST00000481710 MAGI1Q96QZ7 1491 aaPredicted RBP30.15■■■□□ 2.42
SMIM11A-205ENST00000481710 DNAJC5Q9H3Z4 198 aa30.09■■■□□ 2.41
SMIM11A-205ENST00000481710 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
SMIM11A-205ENST00000481710 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
SMIM11A-205ENST00000481710 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
SMIM11A-205ENST00000481710 KIF27Q86VH2 1401 aa30■■■□□ 2.39
SMIM11A-205ENST00000481710 TRIM41Q8WV44 630 aa29.99■■■□□ 2.39
SMIM11A-205ENST00000481710 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
SMIM11A-205ENST00000481710 FBLN2P98095 1184 aa29.96■■■□□ 2.39
SMIM11A-205ENST00000481710 CUL7Q14999 1698 aa29.91■■■□□ 2.38
SMIM11A-205ENST00000481710 FHAD1B1AJZ9 1412 aa29.9■■■□□ 2.38
SMIM11A-205ENST00000481710 CHMP7Q8WUX9 453 aaPredicted RBP29.89■■■□□ 2.38
SMIM11A-205ENST00000481710 GRIN2AQ12879 1464 aa29.88■■■□□ 2.37
SMIM11A-205ENST00000481710 RUSC2Q8N2Y8 1516 aa29.87■■■□□ 2.37
SMIM11A-205ENST00000481710 IGF1RP08069 1367 aa29.84■■■□□ 2.37
SMIM11A-205ENST00000481710 CLASP1Q7Z460 1538 aa29.84■■■□□ 2.37
SMIM11A-205ENST00000481710 CEP170Q5SW79 1584 aa29.79■■■□□ 2.36
SMIM11A-205ENST00000481710 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
SMIM11A-205ENST00000481710 NUP160Q12769 1436 aa29.72■■■□□ 2.35
SMIM11A-205ENST00000481710 RIMBP3CA6NJZ7 1639 aa29.7■■■□□ 2.34
SMIM11A-205ENST00000481710 RIMBP3BA6NNM3 1639 aa29.7■■■□□ 2.34
SMIM11A-205ENST00000481710 RIMBP3Q9UFD9 1639 aa29.7■■■□□ 2.34
SMIM11A-205ENST00000481710 CARMIL1Q5VZK9 1371 aa29.67■■■□□ 2.34
SMIM11A-205ENST00000481710 ARHGEF11O15085 1522 aa29.65■■■□□ 2.34
SMIM11A-205ENST00000481710 SHROOM2Q13796 1616 aa29.57■■■□□ 2.32
SMIM11A-205ENST00000481710 RAPGEF2Q9Y4G8 1499 aa29.55■■■□□ 2.32
SMIM11A-205ENST00000481710 EEA1Q15075 1411 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms