RNA–Protein interactions for RNA: ENST00000481671.6

SMIM7-207, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,126 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-207ENST00000481671 NISCHQ9Y2I1 1504 aa23.99■■□□□ 1.43
SMIM7-207ENST00000481671 ABCC9O60706 1549 aa21.77■■□□□ 1.08
SMIM7-207ENST00000481671 CCDC180Q9P1Z9 1646 aa21.44■■□□□ 1.02
SMIM7-207ENST00000481671 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
SMIM7-207ENST00000481671 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
SMIM7-207ENST00000481671 NACADO15069 1562 aa20.41■□□□□ 0.86
SMIM7-207ENST00000481671 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
SMIM7-207ENST00000481671 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
SMIM7-207ENST00000481671 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
SMIM7-207ENST00000481671 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
SMIM7-207ENST00000481671 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
SMIM7-207ENST00000481671 ZCCHC6Q5VYS8 1495 aaKnown RBP19.86■□□□□ 0.77
SMIM7-207ENST00000481671 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
SMIM7-207ENST00000481671 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
SMIM7-207ENST00000481671 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
SMIM7-207ENST00000481671 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
SMIM7-207ENST00000481671 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.73
SMIM7-207ENST00000481671 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
SMIM7-207ENST00000481671 DNAJC5Q9H3Z4 198 aa19.07■□□□□ 0.64
SMIM7-207ENST00000481671 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
SMIM7-207ENST00000481671 ATAD2BQ9ULI0 1458 aa18.84■□□□□ 0.61
SMIM7-207ENST00000481671 CUX2O14529 1486 aa18.81■□□□□ 0.6
SMIM7-207ENST00000481671 ERCC6Q03468 1493 aa18.77■□□□□ 0.6
SMIM7-207ENST00000481671 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
SMIM7-207ENST00000481671 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
SMIM7-207ENST00000481671 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
SMIM7-207ENST00000481671 NESP48681 1621 aa18.66■□□□□ 0.58
SMIM7-207ENST00000481671 BAZ1BQ9UIG0 1483 aaKnown RBP18.6■□□□□ 0.57
SMIM7-207ENST00000481671 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
SMIM7-207ENST00000481671 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
SMIM7-207ENST00000481671 MROH2BQ7Z745 1585 aa18.5■□□□□ 0.55
SMIM7-207ENST00000481671 THOC2Q8NI27 1593 aaKnown RBP18.42■□□□□ 0.54
SMIM7-207ENST00000481671 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
SMIM7-207ENST00000481671 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
SMIM7-207ENST00000481671 CADPSQ9ULU8 1353 aa18.36■□□□□ 0.53
SMIM7-207ENST00000481671 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
SMIM7-207ENST00000481671 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
SMIM7-207ENST00000481671 WDR62O43379 1518 aa18.18■□□□□ 0.5
SMIM7-207ENST00000481671 WIZO95785 1651 aa18.16■□□□□ 0.5
SMIM7-207ENST00000481671 TRIM41Q8WV44 630 aa18.13■□□□□ 0.49
SMIM7-207ENST00000481671 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
SMIM7-207ENST00000481671 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
SMIM7-207ENST00000481671 CFTRP13569 1480 aa18.1■□□□□ 0.49
SMIM7-207ENST00000481671 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
SMIM7-207ENST00000481671 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
SMIM7-207ENST00000481671 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
SMIM7-207ENST00000481671 OSCARQ8IYS5 282 aa17.97■□□□□ 0.47
SMIM7-207ENST00000481671 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
SMIM7-207ENST00000481671 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
SMIM7-207ENST00000481671 IFT140Q96RY7 1462 aa17.79■□□□□ 0.44
SMIM7-207ENST00000481671 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
SMIM7-207ENST00000481671 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
SMIM7-207ENST00000481671 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
SMIM7-207ENST00000481671 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
SMIM7-207ENST00000481671 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
SMIM7-207ENST00000481671 ARHGEF11O15085 1522 aa17.64■□□□□ 0.41
SMIM7-207ENST00000481671 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMIM7-207ENST00000481671 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
SMIM7-207ENST00000481671 PRDM2Q13029 1718 aa17.58■□□□□ 0.41
SMIM7-207ENST00000481671 EIF4G3O43432 1585 aaKnown RBP17.58■□□□□ 0.41
SMIM7-207ENST00000481671 CYB5RLQ6IPT4 315 aa17.57■□□□□ 0.4
SMIM7-207ENST00000481671 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
SMIM7-207ENST00000481671 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
SMIM7-207ENST00000481671 FBLN2P98095 1184 aa17.52■□□□□ 0.4
SMIM7-207ENST00000481671 RAD54L2Q9Y4B4 1467 aa17.51■□□□□ 0.39
SMIM7-207ENST00000481671 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
SMIM7-207ENST00000481671 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
SMIM7-207ENST00000481671 SOGA1O94964 1423 aa17.48■□□□□ 0.39
SMIM7-207ENST00000481671 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
SMIM7-207ENST00000481671 FGD5Q6ZNL6 1462 aa17.41■□□□□ 0.38
SMIM7-207ENST00000481671 TRHP20396 242 aaPredicted RBP17.39■□□□□ 0.37
SMIM7-207ENST00000481671 CHD1O14646 1710 aa17.38■□□□□ 0.37
SMIM7-207ENST00000481671 CUX1P39880 1505 aa17.38■□□□□ 0.37
SMIM7-207ENST00000481671 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
SMIM7-207ENST00000481671 GRIN2BQ13224 1484 aa17.34■□□□□ 0.37
SMIM7-207ENST00000481671 CLASP1Q7Z460 1538 aa17.34■□□□□ 0.37
SMIM7-207ENST00000481671 MAGI1Q96QZ7 1491 aaPredicted RBP17.33■□□□□ 0.37
SMIM7-207ENST00000481671 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
SMIM7-207ENST00000481671 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
SMIM7-207ENST00000481671 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
SMIM7-207ENST00000481671 GAPVD1Q14C86 1478 aa17.25■□□□□ 0.35
SMIM7-207ENST00000481671 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.35
SMIM7-207ENST00000481671 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
SMIM7-207ENST00000481671 ABCA5Q8WWZ7 1642 aa17.13■□□□□ 0.33
SMIM7-207ENST00000481671 WRNQ14191 1432 aaPredicted RBP eCLIP17.12■□□□□ 0.33
SMIM7-207ENST00000481671 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
SMIM7-207ENST00000481671 NUP160Q12769 1436 aa17.1■□□□□ 0.33
SMIM7-207ENST00000481671 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
SMIM7-207ENST00000481671 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
SMIM7-207ENST00000481671 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
SMIM7-207ENST00000481671 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
SMIM7-207ENST00000481671 CEP170Q5SW79 1584 aa17.02■□□□□ 0.31
SMIM7-207ENST00000481671 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
SMIM7-207ENST00000481671 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
SMIM7-207ENST00000481671 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.3
SMIM7-207ENST00000481671 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
SMIM7-207ENST00000481671 JPH4Q96JJ6 628 aa16.93■□□□□ 0.3
SMIM7-207ENST00000481671 PRG4Q92954 1404 aaPredicted RBP16.93■□□□□ 0.3
SMIM7-207ENST00000481671 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
SMIM7-207ENST00000481671 IGF1RP08069 1367 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms