RNA–Protein interactions for RNA: ENST00000481591.5

ITGB5-207, Transcript of integrin subunit beta 5, humanhuman

TSL 5

Gene ITGB5, Length 1,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-207ENST00000481591 NISCHQ9Y2I1 1504 aa45.55■■■■■ 4.88
ITGB5-207ENST00000481591 ABCC9O60706 1549 aa41.08■■■■■ 4.17
ITGB5-207ENST00000481591 CCDC180Q9P1Z9 1646 aa40.92■■■■■ 4.14
ITGB5-207ENST00000481591 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
ITGB5-207ENST00000481591 DNAJC5BQ9UF47 199 aa38.77■■■■□ 3.8
ITGB5-207ENST00000481591 NACADO15069 1562 aa38.66■■■■□ 3.78
ITGB5-207ENST00000481591 UNC13AQ9UPW8 1703 aa38.27■■■■□ 3.72
ITGB5-207ENST00000481591 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
ITGB5-207ENST00000481591 PABPN1Q86U42 306 aaKnown RBP eCLIP38.18■■■■□ 3.7
ITGB5-207ENST00000481591 MYO15BQ96JP2 1530 aa38.12■■■■□ 3.69
ITGB5-207ENST00000481591 BICRAQ9NZM4 1560 aa38.04■■■■□ 3.68
ITGB5-207ENST00000481591 ZCCHC6Q5VYS8 1495 aaKnown RBP37.77■■■■□ 3.64
ITGB5-207ENST00000481591 DCAF1Q9Y4B6 1507 aa37.59■■■■□ 3.61
ITGB5-207ENST00000481591 SCRIBQ14160 1630 aa37.32■■■■□ 3.56
ITGB5-207ENST00000481591 SHROOM4Q9ULL8 1493 aa37.3■■■■□ 3.56
ITGB5-207ENST00000481591 CC2D2AQ9P2K1 1620 aa37.13■■■■□ 3.53
ITGB5-207ENST00000481591 EIF4G1Q04637 1599 aaKnown RBP37.01■■■■□ 3.52
ITGB5-207ENST00000481591 CECR2Q9BXF3 1484 aa36.98■■■■□ 3.51
ITGB5-207ENST00000481591 NCAPD3P42695 1498 aa35.73■■■■□ 3.31
ITGB5-207ENST00000481591 ATAD2BQ9ULI0 1458 aa35.64■■■■□ 3.3
ITGB5-207ENST00000481591 SMARCA4P51532 1647 aa35.58■■■■□ 3.29
ITGB5-207ENST00000481591 DNAJC5Q9H3Z4 198 aa35.53■■■■□ 3.28
ITGB5-207ENST00000481591 HMGXB3Q12766 1538 aa35.47■■■■□ 3.27
ITGB5-207ENST00000481591 SMARCA2P51531 1590 aa35.44■■■■□ 3.26
ITGB5-207ENST00000481591 CUX2O14529 1486 aa35.4■■■■□ 3.26
ITGB5-207ENST00000481591 ERCC6Q03468 1493 aa35.35■■■■□ 3.25
ITGB5-207ENST00000481591 NESP48681 1621 aa35.32■■■■□ 3.25
ITGB5-207ENST00000481591 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
ITGB5-207ENST00000481591 PEG3Q9GZU2 1588 aa35.25■■■■□ 3.23
ITGB5-207ENST00000481591 BAZ1BQ9UIG0 1483 aaKnown RBP35.21■■■■□ 3.23
ITGB5-207ENST00000481591 MROH2BQ7Z745 1585 aa35.16■■■■□ 3.22
ITGB5-207ENST00000481591 THOC2Q8NI27 1593 aaKnown RBP35.02■■■■□ 3.2
ITGB5-207ENST00000481591 LAMC3Q9Y6N6 1575 aa34.93■■■■□ 3.18
ITGB5-207ENST00000481591 KIF21AQ7Z4S6 1674 aa34.85■■■■□ 3.17
ITGB5-207ENST00000481591 WIZO95785 1651 aa34.71■■■■□ 3.15
ITGB5-207ENST00000481591 PDS5BQ9NTI5 1447 aa34.64■■■■□ 3.14
ITGB5-207ENST00000481591 CADPSQ9ULU8 1353 aa34.59■■■■□ 3.13
ITGB5-207ENST00000481591 MRC2Q9UBG0 1479 aa34.46■■■■□ 3.11
ITGB5-207ENST00000481591 WDR62O43379 1518 aa34.44■■■■□ 3.1
ITGB5-207ENST00000481591 RSF1Q96T23 1441 aaPredicted RBP34.32■■■■□ 3.08
ITGB5-207ENST00000481591 CEP164Q9UPV0 1460 aa34.26■■■■□ 3.07
ITGB5-207ENST00000481591 FANCD2Q9BXW9 1451 aa34.24■■■■□ 3.07
ITGB5-207ENST00000481591 CFTRP13569 1480 aa34.23■■■■□ 3.07
ITGB5-207ENST00000481591 TOP2AP11388 1531 aaKnown RBP34.22■■■■□ 3.07
ITGB5-207ENST00000481591 URB2Q14146 1524 aaKnown RBP34.06■■■■□ 3.04
ITGB5-207ENST00000481591 PRDM2Q13029 1718 aa33.88■■■■□ 3.01
ITGB5-207ENST00000481591 TRIM41Q8WV44 630 aa33.85■■■■□ 3.01
ITGB5-207ENST00000481591 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
ITGB5-207ENST00000481591 ZNF608Q9ULD9 1512 aaPredicted RBP33.67■■■□□ 2.98
ITGB5-207ENST00000481591 OSCARQ8IYS5 282 aa33.62■■■□□ 2.97
ITGB5-207ENST00000481591 TOPBP1Q92547 1522 aa33.61■■■□□ 2.97
ITGB5-207ENST00000481591 IFT140Q96RY7 1462 aa33.56■■■□□ 2.96
ITGB5-207ENST00000481591 EIF4G3O43432 1585 aaKnown RBP33.46■■■□□ 2.95
ITGB5-207ENST00000481591 DNMBPQ6XZF7 1577 aa33.46■■■□□ 2.95
ITGB5-207ENST00000481591 RIMBP3CA6NJZ7 1639 aa33.43■■■□□ 2.94
ITGB5-207ENST00000481591 RIMBP3BA6NNM3 1639 aa33.43■■■□□ 2.94
ITGB5-207ENST00000481591 RIMBP3Q9UFD9 1639 aa33.43■■■□□ 2.94
ITGB5-207ENST00000481591 TARBP1Q13395 1621 aaKnown RBP33.4■■■□□ 2.94
ITGB5-207ENST00000481591 ABCC8Q09428 1581 aa33.35■■■□□ 2.93
ITGB5-207ENST00000481591 ARHGEF11O15085 1522 aa33.29■■■□□ 2.92
ITGB5-207ENST00000481591 AQRO60306 1485 aaKnown RBP eCLIP33.28■■■□□ 2.922e-6■■□□□ 11.9
ITGB5-207ENST00000481591 POLA1P09884 1462 aaPredicted RBP33.27■■■□□ 2.92
ITGB5-207ENST00000481591 CHD1O14646 1710 aa33.23■■■□□ 2.91
ITGB5-207ENST00000481591 RAD54L2Q9Y4B4 1467 aa33.16■■■□□ 2.9
ITGB5-207ENST00000481591 CUX1P39880 1505 aa33.03■■■□□ 2.88
ITGB5-207ENST00000481591 FGD5Q6ZNL6 1462 aa33.03■■■□□ 2.88
ITGB5-207ENST00000481591 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
ITGB5-207ENST00000481591 SOGA1O94964 1423 aa33.01■■■□□ 2.87
ITGB5-207ENST00000481591 ARAP1Q96P48 1450 aa32.99■■■□□ 2.87
ITGB5-207ENST00000481591 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
ITGB5-207ENST00000481591 CYB5RLQ6IPT4 315 aa32.9■■■□□ 2.86
ITGB5-207ENST00000481591 WDR97A6NE52 1622 aa32.89■■■□□ 2.86
ITGB5-207ENST00000481591 FBLN2P98095 1184 aa32.89■■■□□ 2.86
ITGB5-207ENST00000481591 CLASP1Q7Z460 1538 aa32.88■■■□□ 2.85
ITGB5-207ENST00000481591 MAGI1Q96QZ7 1491 aaPredicted RBP32.78■■■□□ 2.84
ITGB5-207ENST00000481591 GRIN2BQ13224 1484 aa32.75■■■□□ 2.83
ITGB5-207ENST00000481591 PBRM1Q86U86 1689 aa32.71■■■□□ 2.83
ITGB5-207ENST00000481591 SYNJ2O15056 1496 aa32.69■■■□□ 2.82
ITGB5-207ENST00000481591 SYNJ1O43426 1573 aa32.69■■■□□ 2.82
ITGB5-207ENST00000481591 ABCA5Q8WWZ7 1642 aa32.67■■■□□ 2.82
ITGB5-207ENST00000481591 ABCA10Q8WWZ4 1543 aa32.63■■■□□ 2.81
ITGB5-207ENST00000481591 GAPVD1Q14C86 1478 aa32.63■■■□□ 2.81
ITGB5-207ENST00000481591 CHMP7Q8WUX9 453 aaPredicted RBP32.62■■■□□ 2.81
ITGB5-207ENST00000481591 SUPT5HO00267 1087 aaKnown RBP32.51■■■□□ 2.79
ITGB5-207ENST00000481591 TRHP20396 242 aaPredicted RBP32.49■■■□□ 2.79
ITGB5-207ENST00000481591 BIVM-ERCC5R4GMW8 1640 aa32.44■■■□□ 2.78
ITGB5-207ENST00000481591 ERCC6L2Q5T890 1561 aa32.43■■■□□ 2.78
ITGB5-207ENST00000481591 ADAMTS12P58397 1594 aa32.41■■■□□ 2.78
ITGB5-207ENST00000481591 TOP2BQ02880 1626 aa32.4■■■□□ 2.78
ITGB5-207ENST00000481591 GRIN2AQ12879 1464 aa32.39■■■□□ 2.78
ITGB5-207ENST00000481591 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
ITGB5-207ENST00000481591 WRNQ14191 1432 aaPredicted RBP eCLIP32.37■■■□□ 2.77
ITGB5-207ENST00000481591 NUP160Q12769 1436 aa32.32■■■□□ 2.76
ITGB5-207ENST00000481591 SHROOM2Q13796 1616 aa32.24■■■□□ 2.75
ITGB5-207ENST00000481591 FHAD1B1AJZ9 1412 aa32.19■■■□□ 2.74
ITGB5-207ENST00000481591 ERICH3Q5RHP9 1530 aa32.18■■■□□ 2.74
ITGB5-207ENST00000481591 RUSC2Q8N2Y8 1516 aa31.99■■■□□ 2.71
ITGB5-207ENST00000481591 PRG4Q92954 1404 aaPredicted RBP31.94■■■□□ 2.7
ITGB5-207ENST00000481591 KIF13AQ9H1H9 1805 aa31.88■■■□□ 2.69
ITGB5-207ENST00000481591 JPH4Q96JJ6 628 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms