RNA–Protein interactions for RNA: ENST00000481551.5

RBM48-202, Transcript of RNA binding motif protein 48, humanhuman

TSL 1 (best) BASIC

Gene RBM48, Length 4,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48-202ENST00000481551 NISCHQ9Y2I1 1504 aa14.85□□□□□ -0.03
RBM48-202ENST00000481551 CCDC180Q9P1Z9 1646 aa13.25□□□□□ -0.29
RBM48-202ENST00000481551 ZCCHC6Q5VYS8 1495 aaKnown RBP12.5□□□□□ -0.41
RBM48-202ENST00000481551 DCAF1Q9Y4B6 1507 aa12.46□□□□□ -0.41
RBM48-202ENST00000481551 MYO15BQ96JP2 1530 aa12.43□□□□□ -0.42
RBM48-202ENST00000481551 ABCC9O60706 1549 aa12.27□□□□□ -0.45
RBM48-202ENST00000481551 NACADO15069 1562 aa12.25□□□□□ -0.45
RBM48-202ENST00000481551 RB1CC1Q8TDY2 1594 aa12.14□□□□□ -0.47
RBM48-202ENST00000481551 UNC13AQ9UPW8 1703 aa12.1□□□□□ -0.47
RBM48-202ENST00000481551 BICRAQ9NZM4 1560 aa11.91□□□□□ -0.5
RBM48-202ENST00000481551 SCRIBQ14160 1630 aa11.85□□□□□ -0.51
RBM48-202ENST00000481551 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
RBM48-202ENST00000481551 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.55
RBM48-202ENST00000481551 PEG3Q9GZU2 1588 aa11.52□□□□□ -0.56
RBM48-202ENST00000481551 SMARCA4P51532 1647 aa11.5□□□□□ -0.57
RBM48-202ENST00000481551 BAZ1AQ9NRL2 1556 aaPredicted RBP11.47□□□□□ -0.57
RBM48-202ENST00000481551 CECR2Q9BXF3 1484 aa11.46□□□□□ -0.58
RBM48-202ENST00000481551 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
RBM48-202ENST00000481551 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
RBM48-202ENST00000481551 PABPN1Q86U42 306 aaKnown RBP eCLIP11.38□□□□□ -0.59
RBM48-202ENST00000481551 RSF1Q96T23 1441 aaPredicted RBP11.36□□□□□ -0.59
RBM48-202ENST00000481551 WIZO95785 1651 aa11.34□□□□□ -0.59
RBM48-202ENST00000481551 HMGXB3Q12766 1538 aa11.32□□□□□ -0.6
RBM48-202ENST00000481551 CC2D2AQ9P2K1 1620 aa11.31□□□□□ -0.6
RBM48-202ENST00000481551 SMARCA2P51531 1590 aa11.3□□□□□ -0.6
RBM48-202ENST00000481551 ATAD2BQ9ULI0 1458 aa11.28□□□□□ -0.6
RBM48-202ENST00000481551 NCAPD3P42695 1498 aa11.27□□□□□ -0.61
RBM48-202ENST00000481551 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
RBM48-202ENST00000481551 PRDM2Q13029 1718 aa11.13□□□□□ -0.63
RBM48-202ENST00000481551 BAZ1BQ9UIG0 1483 aaKnown RBP11.11□□□□□ -0.63
RBM48-202ENST00000481551 CCDC88BA6NC98 1476 aa11.04□□□□□ -0.64
RBM48-202ENST00000481551 DNAJC5BQ9UF47 199 aa11.03□□□□□ -0.64
RBM48-202ENST00000481551 CFTRP13569 1480 aa10.95□□□□□ -0.66
RBM48-202ENST00000481551 LAMC3Q9Y6N6 1575 aa10.95□□□□□ -0.66
RBM48-202ENST00000481551 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
RBM48-202ENST00000481551 KIF21AQ7Z4S6 1674 aa10.85□□□□□ -0.67
RBM48-202ENST00000481551 CADPSQ9ULU8 1353 aa10.84□□□□□ -0.67
RBM48-202ENST00000481551 BIVM-ERCC5R4GMW8 1640 aa10.83□□□□□ -0.68
RBM48-202ENST00000481551 NESP48681 1621 aa10.8□□□□□ -0.68
RBM48-202ENST00000481551 THOC2Q8NI27 1593 aaKnown RBP10.79□□□□□ -0.68
RBM48-202ENST00000481551 TOP2BQ02880 1626 aa10.76□□□□□ -0.69
RBM48-202ENST00000481551 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
RBM48-202ENST00000481551 SYNJ1O43426 1573 aa10.73□□□□□ -0.69
RBM48-202ENST00000481551 WDR62O43379 1518 aa10.73□□□□□ -0.69
RBM48-202ENST00000481551 FANCD2Q9BXW9 1451 aa10.72□□□□□ -0.69
RBM48-202ENST00000481551 CUX1P39880 1505 aa10.71□□□□□ -0.69
RBM48-202ENST00000481551 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.7
RBM48-202ENST00000481551 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
RBM48-202ENST00000481551 URB2Q14146 1524 aaKnown RBP10.68□□□□□ -0.7
RBM48-202ENST00000481551 PDS5BQ9NTI5 1447 aa10.68□□□□□ -0.7
RBM48-202ENST00000481551 CEP164Q9UPV0 1460 aa10.66□□□□□ -0.7
RBM48-202ENST00000481551 TARBP1Q13395 1621 aaKnown RBP10.65□□□□□ -0.71
RBM48-202ENST00000481551 MRC2Q9UBG0 1479 aa10.64□□□□□ -0.71
RBM48-202ENST00000481551 TOPBP1Q92547 1522 aa10.64□□□□□ -0.71
RBM48-202ENST00000481551 WRNQ14191 1432 aaPredicted RBP eCLIP10.61□□□□□ -0.71
RBM48-202ENST00000481551 ABCA5Q8WWZ7 1642 aa10.58□□□□□ -0.72
RBM48-202ENST00000481551 CUX2O14529 1486 aa10.57□□□□□ -0.72
RBM48-202ENST00000481551 POLA1P09884 1462 aaPredicted RBP10.56□□□□□ -0.72
RBM48-202ENST00000481551 ABCA10Q8WWZ4 1543 aa10.54□□□□□ -0.72
RBM48-202ENST00000481551 FGD5Q6ZNL6 1462 aa10.54□□□□□ -0.72
RBM48-202ENST00000481551 CHIC1Q5VXU3 224 aa10.53□□□□□ -0.72
RBM48-202ENST00000481551 PBRM1Q86U86 1689 aa10.51□□□□□ -0.73
RBM48-202ENST00000481551 ERCC6Q03468 1493 aa10.48□□□□□ -0.73
RBM48-202ENST00000481551 IFT140Q96RY7 1462 aa10.47□□□□□ -0.73
RBM48-202ENST00000481551 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.73
RBM48-202ENST00000481551 ERICH3Q5RHP9 1530 aa10.44□□□□□ -0.74
RBM48-202ENST00000481551 RAD54L2Q9Y4B4 1467 aa10.43□□□□□ -0.74
RBM48-202ENST00000481551 CUL7Q14999 1698 aa10.43□□□□□ -0.74
RBM48-202ENST00000481551 KIF21BO75037 1637 aa10.43□□□□□ -0.74
RBM48-202ENST00000481551 EEA1Q15075 1411 aa10.41□□□□□ -0.74
RBM48-202ENST00000481551 RUSC2Q8N2Y8 1516 aa10.41□□□□□ -0.74
RBM48-202ENST00000481551 SOGA1O94964 1423 aa10.4□□□□□ -0.74
RBM48-202ENST00000481551 ADAMTS12P58397 1594 aa10.39□□□□□ -0.75
RBM48-202ENST00000481551 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
RBM48-202ENST00000481551 PRXQ9BXM0 1461 aa10.38□□□□□ -0.75
RBM48-202ENST00000481551 GAPVD1Q14C86 1478 aa10.34□□□□□ -0.75
RBM48-202ENST00000481551 KIF27Q86VH2 1401 aa10.34□□□□□ -0.75
RBM48-202ENST00000481551 IGF1RP08069 1367 aa10.32□□□□□ -0.76
RBM48-202ENST00000481551 TRIM41Q8WV44 630 aa10.32□□□□□ -0.76
RBM48-202ENST00000481551 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
RBM48-202ENST00000481551 CTTNBP2Q8WZ74 1663 aa10.32□□□□□ -0.76
RBM48-202ENST00000481551 GRIN2BQ13224 1484 aa10.32□□□□□ -0.76
RBM48-202ENST00000481551 CHD1O14646 1710 aa10.3□□□□□ -0.76
RBM48-202ENST00000481551 AQRO60306 1485 aaKnown RBP eCLIP10.29□□□□□ -0.763e-7■■■□□ 18.4
RBM48-202ENST00000481551 SHROOM2Q13796 1616 aa10.26□□□□□ -0.77
RBM48-202ENST00000481551 SNAPC4Q5SXM2 1469 aa10.25□□□□□ -0.77
RBM48-202ENST00000481551 FHAD1B1AJZ9 1412 aa10.25□□□□□ -0.77
RBM48-202ENST00000481551 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
RBM48-202ENST00000481551 CEP170Q5SW79 1584 aa10.24□□□□□ -0.77
RBM48-202ENST00000481551 TDRD9Q8NDG6 1382 aaKnown RBP10.24□□□□□ -0.77
RBM48-202ENST00000481551 CLASP1Q7Z460 1538 aa10.24□□□□□ -0.77
RBM48-202ENST00000481551 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
RBM48-202ENST00000481551 NUP160Q12769 1436 aa10.23□□□□□ -0.77
RBM48-202ENST00000481551 GRIN2AQ12879 1464 aa10.22□□□□□ -0.77
RBM48-202ENST00000481551 SAMD9Q5K651 1589 aa10.22□□□□□ -0.77
RBM48-202ENST00000481551 GOLGA3Q08378 1498 aa10.2□□□□□ -0.78
RBM48-202ENST00000481551 CARMIL1Q5VZK9 1371 aa10.18□□□□□ -0.78
RBM48-202ENST00000481551 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
RBM48-202ENST00000481551 UGGT2Q9NYU1 1516 aa10.17□□□□□ -0.78
RBM48-202ENST00000481551 IQGAP2Q13576 1575 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms