RNA–Protein interactions for RNA: ENST00000481509.5

PHF11-209, Transcript of PHD finger protein 11, humanhuman

TSL 4

Gene PHF11, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-209ENST00000481509 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
PHF11-209ENST00000481509 CCDC180Q9P1Z9 1646 aa29.36■■■□□ 2.29
PHF11-209ENST00000481509 ABCC9O60706 1549 aa27.95■■■□□ 2.06
PHF11-209ENST00000481509 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.06
PHF11-209ENST00000481509 DCAF1Q9Y4B6 1507 aa27.67■■■□□ 2.02
PHF11-209ENST00000481509 MYO15BQ96JP2 1530 aa27.56■■■□□ 2
PHF11-209ENST00000481509 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
PHF11-209ENST00000481509 NACADO15069 1562 aa27.45■■□□□ 1.99
PHF11-209ENST00000481509 RB1CC1Q8TDY2 1594 aa27.3■■□□□ 1.96
PHF11-209ENST00000481509 SCRIBQ14160 1630 aa26.75■■□□□ 1.87
PHF11-209ENST00000481509 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
PHF11-209ENST00000481509 UNC13AQ9UPW8 1703 aa26.59■■□□□ 1.85
PHF11-209ENST00000481509 BICRAQ9NZM4 1560 aa26.37■■□□□ 1.81
PHF11-209ENST00000481509 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
PHF11-209ENST00000481509 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
PHF11-209ENST00000481509 CECR2Q9BXF3 1484 aa25.81■■□□□ 1.72
PHF11-209ENST00000481509 SMARCA4P51532 1647 aa25.7■■□□□ 1.7
PHF11-209ENST00000481509 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
PHF11-209ENST00000481509 RSF1Q96T23 1441 aaPredicted RBP25.64■■□□□ 1.7
PHF11-209ENST00000481509 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
PHF11-209ENST00000481509 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
PHF11-209ENST00000481509 PEG3Q9GZU2 1588 aa25.48■■□□□ 1.67
PHF11-209ENST00000481509 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
PHF11-209ENST00000481509 WIZO95785 1651 aa25.41■■□□□ 1.66
PHF11-209ENST00000481509 ATAD2BQ9ULI0 1458 aa25.39■■□□□ 1.65
PHF11-209ENST00000481509 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
PHF11-209ENST00000481509 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
PHF11-209ENST00000481509 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
PHF11-209ENST00000481509 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
PHF11-209ENST00000481509 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
PHF11-209ENST00000481509 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
PHF11-209ENST00000481509 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
PHF11-209ENST00000481509 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
PHF11-209ENST00000481509 CFTRP13569 1480 aa24.59■■□□□ 1.53
PHF11-209ENST00000481509 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
PHF11-209ENST00000481509 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
PHF11-209ENST00000481509 NESP48681 1621 aa24.37■■□□□ 1.49
PHF11-209ENST00000481509 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
PHF11-209ENST00000481509 FANCD2Q9BXW9 1451 aa24.28■■□□□ 1.48
PHF11-209ENST00000481509 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
PHF11-209ENST00000481509 CEP164Q9UPV0 1460 aa24.2■■□□□ 1.47
PHF11-209ENST00000481509 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
PHF11-209ENST00000481509 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
PHF11-209ENST00000481509 KIF21AQ7Z4S6 1674 aa24.13■■□□□ 1.45
PHF11-209ENST00000481509 TRIM41Q8WV44 630 aa24.12■■□□□ 1.45
PHF11-209ENST00000481509 ERCC6Q03468 1493 aa24.09■■□□□ 1.45
PHF11-209ENST00000481509 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
PHF11-209ENST00000481509 BIVM-ERCC5R4GMW8 1640 aa24.04■■□□□ 1.44
PHF11-209ENST00000481509 CUX1P39880 1505 aa24.03■■□□□ 1.44
PHF11-209ENST00000481509 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
PHF11-209ENST00000481509 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
PHF11-209ENST00000481509 MRC2Q9UBG0 1479 aa24.01■■□□□ 1.43
PHF11-209ENST00000481509 TOPBP1Q92547 1522 aa23.97■■□□□ 1.43
PHF11-209ENST00000481509 URB2Q14146 1524 aaKnown RBP23.96■■□□□ 1.43
PHF11-209ENST00000481509 WDR62O43379 1518 aa23.9■■□□□ 1.42
PHF11-209ENST00000481509 THOC2Q8NI27 1593 aaKnown RBP23.89■■□□□ 1.41
PHF11-209ENST00000481509 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
PHF11-209ENST00000481509 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
PHF11-209ENST00000481509 SOGA1O94964 1423 aa23.76■■□□□ 1.39
PHF11-209ENST00000481509 EEA1Q15075 1411 aa23.72■■□□□ 1.39
PHF11-209ENST00000481509 ABCA10Q8WWZ4 1543 aa23.69■■□□□ 1.38
PHF11-209ENST00000481509 IFT140Q96RY7 1462 aa23.68■■□□□ 1.38
PHF11-209ENST00000481509 CUX2O14529 1486 aa23.67■■□□□ 1.38
PHF11-209ENST00000481509 RAD54L2Q9Y4B4 1467 aa23.66■■□□□ 1.38
PHF11-209ENST00000481509 TARBP1Q13395 1621 aaKnown RBP23.65■■□□□ 1.38
PHF11-209ENST00000481509 KIF27Q86VH2 1401 aa23.65■■□□□ 1.38
PHF11-209ENST00000481509 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
PHF11-209ENST00000481509 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
PHF11-209ENST00000481509 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
PHF11-209ENST00000481509 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
PHF11-209ENST00000481509 FAM9AQ8IZU1 332 aaPredicted RBP23.5■■□□□ 1.35
PHF11-209ENST00000481509 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
PHF11-209ENST00000481509 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
PHF11-209ENST00000481509 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
PHF11-209ENST00000481509 IGF1RP08069 1367 aa23.43■■□□□ 1.34
PHF11-209ENST00000481509 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
PHF11-209ENST00000481509 AQRO60306 1485 aaKnown RBP eCLIP23.41■■□□□ 1.34
PHF11-209ENST00000481509 GRIN2BQ13224 1484 aa23.4■■□□□ 1.34
PHF11-209ENST00000481509 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
PHF11-209ENST00000481509 CUL7Q14999 1698 aa23.37■■□□□ 1.33
PHF11-209ENST00000481509 PBRM1Q86U86 1689 aa23.37■■□□□ 1.33
PHF11-209ENST00000481509 KIF21BO75037 1637 aa23.35■■□□□ 1.33
PHF11-209ENST00000481509 PRXQ9BXM0 1461 aa23.35■■□□□ 1.33
PHF11-209ENST00000481509 CARMIL1Q5VZK9 1371 aa23.32■■□□□ 1.32
PHF11-209ENST00000481509 GOLGA3Q08378 1498 aa23.28■■□□□ 1.32
PHF11-209ENST00000481509 MAGI1Q96QZ7 1491 aaPredicted RBP23.28■■□□□ 1.32
PHF11-209ENST00000481509 RAPGEF2Q9Y4G8 1499 aa23.28■■□□□ 1.32
PHF11-209ENST00000481509 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
PHF11-209ENST00000481509 SNAPC4Q5SXM2 1469 aa23.23■■□□□ 1.31
PHF11-209ENST00000481509 ADAMTS12P58397 1594 aa23.22■■□□□ 1.31
PHF11-209ENST00000481509 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
PHF11-209ENST00000481509 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
PHF11-209ENST00000481509 UBTFP17480 764 aaKnown RBP23.15■■□□□ 1.3
PHF11-209ENST00000481509 TNIKQ9UKE5 1360 aa23.13■■□□□ 1.29
PHF11-209ENST00000481509 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
PHF11-209ENST00000481509 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
PHF11-209ENST00000481509 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
PHF11-209ENST00000481509 FBLN2P98095 1184 aa23.01■■□□□ 1.27
PHF11-209ENST00000481509 CTTNBP2Q8WZ74 1663 aa23■■□□□ 1.27
PHF11-209ENST00000481509 NUP160Q12769 1436 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms