RNA–Protein interactions for RNA: ENST00000481439.1

SETDB2-204, Transcript of SET domain bifurcated 2, humanhuman

TSL 1 (best)

Gene SETDB2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB2-204ENST00000481439 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
SETDB2-204ENST00000481439 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
SETDB2-204ENST00000481439 ABCC9O60706 1549 aa29.35■■■□□ 2.29
SETDB2-204ENST00000481439 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
SETDB2-204ENST00000481439 NACADO15069 1562 aa27.79■■■□□ 2.04
SETDB2-204ENST00000481439 DCAF8L2P0C7V8 631 aa27.65■■■□□ 2.02
SETDB2-204ENST00000481439 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
SETDB2-204ENST00000481439 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
SETDB2-204ENST00000481439 PABPN1Q86U42 306 aaKnown RBP eCLIP27.36■■□□□ 1.97
SETDB2-204ENST00000481439 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
SETDB2-204ENST00000481439 UNC13AQ9UPW8 1703 aa27.23■■□□□ 1.95
SETDB2-204ENST00000481439 BICRAQ9NZM4 1560 aa27.16■■□□□ 1.94
SETDB2-204ENST00000481439 DCAF1Q9Y4B6 1507 aa27.15■■□□□ 1.94
SETDB2-204ENST00000481439 SCRIBQ14160 1630 aa26.81■■□□□ 1.88
SETDB2-204ENST00000481439 SHROOM4Q9ULL8 1493 aa26.81■■□□□ 1.88
SETDB2-204ENST00000481439 CC2D2AQ9P2K1 1620 aa26.49■■□□□ 1.83
SETDB2-204ENST00000481439 EIF4G1Q04637 1599 aaKnown RBP26.48■■□□□ 1.83
SETDB2-204ENST00000481439 CECR2Q9BXF3 1484 aa26.43■■□□□ 1.82
SETDB2-204ENST00000481439 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
SETDB2-204ENST00000481439 ATAD2BQ9ULI0 1458 aa25.63■■□□□ 1.69
SETDB2-204ENST00000481439 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
SETDB2-204ENST00000481439 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
SETDB2-204ENST00000481439 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
SETDB2-204ENST00000481439 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
SETDB2-204ENST00000481439 PEG3Q9GZU2 1588 aa25.36■■□□□ 1.65
SETDB2-204ENST00000481439 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
SETDB2-204ENST00000481439 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
SETDB2-204ENST00000481439 ERCC6Q03468 1493 aa25.32■■□□□ 1.64
SETDB2-204ENST00000481439 CUX2O14529 1486 aa25.25■■□□□ 1.63
SETDB2-204ENST00000481439 NESP48681 1621 aa25.25■■□□□ 1.63
SETDB2-204ENST00000481439 DNAJC5Q9H3Z4 198 aa25.13■■□□□ 1.61
SETDB2-204ENST00000481439 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
SETDB2-204ENST00000481439 WIZO95785 1651 aa24.98■■□□□ 1.59
SETDB2-204ENST00000481439 THOC2Q8NI27 1593 aaKnown RBP24.96■■□□□ 1.59
SETDB2-204ENST00000481439 PDS5BQ9NTI5 1447 aa24.93■■□□□ 1.58
SETDB2-204ENST00000481439 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
SETDB2-204ENST00000481439 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
SETDB2-204ENST00000481439 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
SETDB2-204ENST00000481439 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
SETDB2-204ENST00000481439 TOP2AP11388 1531 aaKnown RBP24.71■■□□□ 1.55
SETDB2-204ENST00000481439 CFTRP13569 1480 aa24.66■■□□□ 1.54
SETDB2-204ENST00000481439 WDR62O43379 1518 aa24.66■■□□□ 1.54
SETDB2-204ENST00000481439 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
SETDB2-204ENST00000481439 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
SETDB2-204ENST00000481439 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
SETDB2-204ENST00000481439 URB2Q14146 1524 aaKnown RBP24.42■■□□□ 1.5
SETDB2-204ENST00000481439 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
SETDB2-204ENST00000481439 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
SETDB2-204ENST00000481439 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
SETDB2-204ENST00000481439 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
SETDB2-204ENST00000481439 OSCARQ8IYS5 282 aa24.1■■□□□ 1.45
SETDB2-204ENST00000481439 ABCC8Q09428 1581 aa24.08■■□□□ 1.44
SETDB2-204ENST00000481439 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
SETDB2-204ENST00000481439 TRIM41Q8WV44 630 aa24.06■■□□□ 1.44
SETDB2-204ENST00000481439 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
SETDB2-204ENST00000481439 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
SETDB2-204ENST00000481439 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
SETDB2-204ENST00000481439 AQRO60306 1485 aaKnown RBP eCLIP23.9■■□□□ 1.42
SETDB2-204ENST00000481439 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
SETDB2-204ENST00000481439 SOGA1O94964 1423 aa23.81■■□□□ 1.4
SETDB2-204ENST00000481439 CUX1P39880 1505 aa23.79■■□□□ 1.4
SETDB2-204ENST00000481439 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
SETDB2-204ENST00000481439 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
SETDB2-204ENST00000481439 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
SETDB2-204ENST00000481439 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
SETDB2-204ENST00000481439 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
SETDB2-204ENST00000481439 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
SETDB2-204ENST00000481439 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
SETDB2-204ENST00000481439 FBLN2P98095 1184 aa23.69■■□□□ 1.38
SETDB2-204ENST00000481439 CHD1O14646 1710 aa23.68■■□□□ 1.38
SETDB2-204ENST00000481439 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
SETDB2-204ENST00000481439 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
SETDB2-204ENST00000481439 GRIN2BQ13224 1484 aa23.6■■□□□ 1.37
SETDB2-204ENST00000481439 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
SETDB2-204ENST00000481439 CYB5RLQ6IPT4 315 aa23.54■■□□□ 1.36
SETDB2-204ENST00000481439 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
SETDB2-204ENST00000481439 ABCA10Q8WWZ4 1543 aa23.53■■□□□ 1.36
SETDB2-204ENST00000481439 GAPVD1Q14C86 1478 aa23.52■■□□□ 1.36
SETDB2-204ENST00000481439 ARAP1Q96P48 1450 aa23.52■■□□□ 1.36
SETDB2-204ENST00000481439 SYNJ2O15056 1496 aa23.51■■□□□ 1.35
SETDB2-204ENST00000481439 CLASP1Q7Z460 1538 aa23.5■■□□□ 1.35
SETDB2-204ENST00000481439 ABCA5Q8WWZ7 1642 aa23.47■■□□□ 1.35
SETDB2-204ENST00000481439 SYNJ1O43426 1573 aa23.46■■□□□ 1.35
SETDB2-204ENST00000481439 WRNQ14191 1432 aaPredicted RBP eCLIP23.45■■□□□ 1.34
SETDB2-204ENST00000481439 PBRM1Q86U86 1689 aa23.43■■□□□ 1.34
SETDB2-204ENST00000481439 TOP2BQ02880 1626 aa23.41■■□□□ 1.34
SETDB2-204ENST00000481439 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
SETDB2-204ENST00000481439 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
SETDB2-204ENST00000481439 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
SETDB2-204ENST00000481439 NUP160Q12769 1436 aa23.25■■□□□ 1.31
SETDB2-204ENST00000481439 FHAD1B1AJZ9 1412 aa23.24■■□□□ 1.31
SETDB2-204ENST00000481439 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
SETDB2-204ENST00000481439 ERICH3Q5RHP9 1530 aa23.22■■□□□ 1.31
SETDB2-204ENST00000481439 CEP170Q5SW79 1584 aa23.21■■□□□ 1.31
SETDB2-204ENST00000481439 ERCC6L2Q5T890 1561 aa23.15■■□□□ 1.3
SETDB2-204ENST00000481439 SHROOM2Q13796 1616 aa23.08■■□□□ 1.29
SETDB2-204ENST00000481439 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
SETDB2-204ENST00000481439 IGF1RP08069 1367 aa22.98■■□□□ 1.27
SETDB2-204ENST00000481439 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
SETDB2-204ENST00000481439 RUSC2Q8N2Y8 1516 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms