RNA–Protein interactions for RNA: ENST00000481410.1

C7orf49-208, humanhuman

TSL 2

Gene C7orf49, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C7orf49-208ENST00000481410 NISCHQ9Y2I1 1504 aa32.48■■■□□ 2.79
C7orf49-208ENST00000481410 ABCC9O60706 1549 aa30.43■■■□□ 2.46
C7orf49-208ENST00000481410 DNAJC5BQ9UF47 199 aa29.49■■■□□ 2.31
C7orf49-208ENST00000481410 CCDC180Q9P1Z9 1646 aa29.46■■■□□ 2.31
C7orf49-208ENST00000481410 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
C7orf49-208ENST00000481410 PABPN1Q86U42 306 aaKnown RBP eCLIP28.25■■■□□ 2.11
C7orf49-208ENST00000481410 NACADO15069 1562 aa28.11■■■□□ 2.09
C7orf49-208ENST00000481410 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
C7orf49-208ENST00000481410 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
C7orf49-208ENST00000481410 BICRAQ9NZM4 1560 aa27.79■■■□□ 2.04
C7orf49-208ENST00000481410 DNAJC5Q9H3Z4 198 aa27.68■■■□□ 2.02
C7orf49-208ENST00000481410 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
C7orf49-208ENST00000481410 MYO15BQ96JP2 1530 aa27.42■■□□□ 1.98
C7orf49-208ENST00000481410 CC2D2AQ9P2K1 1620 aa27.42■■□□□ 1.98
C7orf49-208ENST00000481410 SHROOM4Q9ULL8 1493 aa27.21■■□□□ 1.95
C7orf49-208ENST00000481410 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.93
C7orf49-208ENST00000481410 SCRIBQ14160 1630 aa26.83■■□□□ 1.88
C7orf49-208ENST00000481410 DCAF1Q9Y4B6 1507 aa26.74■■□□□ 1.87
C7orf49-208ENST00000481410 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.87
C7orf49-208ENST00000481410 CUX2O14529 1486 aa26.56■■□□□ 1.84
C7orf49-208ENST00000481410 ERCC6Q03468 1493 aa26.29■■□□□ 1.8
C7orf49-208ENST00000481410 TRIM41Q8WV44 630 aa26.05■■□□□ 1.76
C7orf49-208ENST00000481410 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
C7orf49-208ENST00000481410 NESP48681 1621 aa25.92■■□□□ 1.74
C7orf49-208ENST00000481410 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
C7orf49-208ENST00000481410 THOC2Q8NI27 1593 aaKnown RBP25.77■■□□□ 1.72
C7orf49-208ENST00000481410 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
C7orf49-208ENST00000481410 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
C7orf49-208ENST00000481410 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
C7orf49-208ENST00000481410 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
C7orf49-208ENST00000481410 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
C7orf49-208ENST00000481410 BAZ1BQ9UIG0 1483 aaKnown RBP25.45■■□□□ 1.66
C7orf49-208ENST00000481410 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
C7orf49-208ENST00000481410 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
C7orf49-208ENST00000481410 BAZ1AQ9NRL2 1556 aaPredicted RBP25.26■■□□□ 1.63
C7orf49-208ENST00000481410 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
C7orf49-208ENST00000481410 MRC2Q9UBG0 1479 aa25.24■■□□□ 1.63
C7orf49-208ENST00000481410 WDR62O43379 1518 aa25.21■■□□□ 1.63
C7orf49-208ENST00000481410 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
C7orf49-208ENST00000481410 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
C7orf49-208ENST00000481410 RIMBP3CA6NJZ7 1639 aa24.99■■□□□ 1.59
C7orf49-208ENST00000481410 RIMBP3BA6NNM3 1639 aa24.99■■□□□ 1.59
C7orf49-208ENST00000481410 RIMBP3Q9UFD9 1639 aa24.99■■□□□ 1.59
C7orf49-208ENST00000481410 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
C7orf49-208ENST00000481410 FANCD2Q9BXW9 1451 aa24.87■■□□□ 1.57
C7orf49-208ENST00000481410 ARHGEF11O15085 1522 aa24.82■■□□□ 1.56
C7orf49-208ENST00000481410 CYB5RLQ6IPT4 315 aa24.75■■□□□ 1.55
C7orf49-208ENST00000481410 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
C7orf49-208ENST00000481410 TRHP20396 242 aaPredicted RBP24.72■■□□□ 1.55
C7orf49-208ENST00000481410 CFTRP13569 1480 aa24.69■■□□□ 1.54
C7orf49-208ENST00000481410 WIZO95785 1651 aa24.68■■□□□ 1.54
C7orf49-208ENST00000481410 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
C7orf49-208ENST00000481410 ZNF608Q9ULD9 1512 aaPredicted RBP24.61■■□□□ 1.53
C7orf49-208ENST00000481410 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
C7orf49-208ENST00000481410 IFT140Q96RY7 1462 aa24.49■■□□□ 1.51
C7orf49-208ENST00000481410 EIF4G3O43432 1585 aaKnown RBP24.35■■□□□ 1.49
C7orf49-208ENST00000481410 CHD1O14646 1710 aa24.35■■□□□ 1.49
C7orf49-208ENST00000481410 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
C7orf49-208ENST00000481410 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
C7orf49-208ENST00000481410 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
C7orf49-208ENST00000481410 AQRO60306 1485 aaKnown RBP eCLIP24.27■■□□□ 1.483e-9■■■■■ 45.6
C7orf49-208ENST00000481410 FBLN2P98095 1184 aa24.27■■□□□ 1.48
C7orf49-208ENST00000481410 TOP2AP11388 1531 aaKnown RBP24.26■■□□□ 1.47
C7orf49-208ENST00000481410 TARBP1Q13395 1621 aaKnown RBP24.16■■□□□ 1.46
C7orf49-208ENST00000481410 ABCC8Q09428 1581 aa24.14■■□□□ 1.45
C7orf49-208ENST00000481410 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
C7orf49-208ENST00000481410 CLASP1Q7Z460 1538 aa24.07■■□□□ 1.44
C7orf49-208ENST00000481410 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
C7orf49-208ENST00000481410 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
C7orf49-208ENST00000481410 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
C7orf49-208ENST00000481410 RAD54L2Q9Y4B4 1467 aa23.96■■□□□ 1.43
C7orf49-208ENST00000481410 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
C7orf49-208ENST00000481410 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
C7orf49-208ENST00000481410 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
C7orf49-208ENST00000481410 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
C7orf49-208ENST00000481410 SOGA1O94964 1423 aa23.88■■□□□ 1.41
C7orf49-208ENST00000481410 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
C7orf49-208ENST00000481410 ILDR1Q86SU0 546 aaPredicted RBP23.78■■□□□ 1.4
C7orf49-208ENST00000481410 SYNJ2O15056 1496 aa23.77■■□□□ 1.4
C7orf49-208ENST00000481410 WDR97A6NE52 1622 aa23.77■■□□□ 1.4
C7orf49-208ENST00000481410 GRIN2BQ13224 1484 aa23.75■■□□□ 1.39
C7orf49-208ENST00000481410 FGD5Q6ZNL6 1462 aa23.7■■□□□ 1.38
C7orf49-208ENST00000481410 ERCC6L2Q5T890 1561 aa23.68■■□□□ 1.38
C7orf49-208ENST00000481410 KIF13AQ9H1H9 1805 aa23.61■■□□□ 1.37
C7orf49-208ENST00000481410 KDM4FA0A1W2PPD8 638 aa23.58■■□□□ 1.37
C7orf49-208ENST00000481410 CUX1P39880 1505 aa23.56■■□□□ 1.36
C7orf49-208ENST00000481410 PBRM1Q86U86 1689 aa23.55■■□□□ 1.36
C7orf49-208ENST00000481410 CEP170Q5SW79 1584 aa23.5■■□□□ 1.35
C7orf49-208ENST00000481410 GRIN2AQ12879 1464 aa23.44■■□□□ 1.34
C7orf49-208ENST00000481410 NUP160Q12769 1436 aa23.42■■□□□ 1.34
C7orf49-208ENST00000481410 FAM69CQ0P6D2 419 aa23.42■■□□□ 1.34
C7orf49-208ENST00000481410 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
C7orf49-208ENST00000481410 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
C7orf49-208ENST00000481410 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
C7orf49-208ENST00000481410 ABCC10Q5T3U5 1492 aa23.37■■□□□ 1.33
C7orf49-208ENST00000481410 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
C7orf49-208ENST00000481410 KDM6BO15054 1643 aa23.28■■□□□ 1.32
C7orf49-208ENST00000481410 PRG4Q92954 1404 aaPredicted RBP23.27■■□□□ 1.32
C7orf49-208ENST00000481410 DIP2BQ9P265 1576 aa23.26■■□□□ 1.31
C7orf49-208ENST00000481410 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms