RNA–Protein interactions for RNA: ENST00000481401.5

TNFRSF25-214, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 5

Gene TNFRSF25, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-214ENST00000481401 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
TNFRSF25-214ENST00000481401 ABCC9O60706 1549 aa29.24■■■□□ 2.27
TNFRSF25-214ENST00000481401 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
TNFRSF25-214ENST00000481401 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
TNFRSF25-214ENST00000481401 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
TNFRSF25-214ENST00000481401 NACADO15069 1562 aa27.27■■□□□ 1.96
TNFRSF25-214ENST00000481401 PABPN1Q86U42 306 aaKnown RBP eCLIP27.13■■□□□ 1.93
TNFRSF25-214ENST00000481401 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
TNFRSF25-214ENST00000481401 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
TNFRSF25-214ENST00000481401 BICRAQ9NZM4 1560 aa26.81■■□□□ 1.88
TNFRSF25-214ENST00000481401 MYO15BQ96JP2 1530 aa26.69■■□□□ 1.86
TNFRSF25-214ENST00000481401 CC2D2AQ9P2K1 1620 aa26.39■■□□□ 1.81
TNFRSF25-214ENST00000481401 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
TNFRSF25-214ENST00000481401 SHROOM4Q9ULL8 1493 aa26.35■■□□□ 1.81
TNFRSF25-214ENST00000481401 ZCCHC6Q5VYS8 1495 aaKnown RBP26.19■■□□□ 1.78
TNFRSF25-214ENST00000481401 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
TNFRSF25-214ENST00000481401 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
TNFRSF25-214ENST00000481401 DCAF1Q9Y4B6 1507 aa26.17■■□□□ 1.78
TNFRSF25-214ENST00000481401 DNAJC5Q9H3Z4 198 aa25.94■■□□□ 1.74
TNFRSF25-214ENST00000481401 CUX2O14529 1486 aa25.37■■□□□ 1.65
TNFRSF25-214ENST00000481401 ERCC6Q03468 1493 aa25.28■■□□□ 1.64
TNFRSF25-214ENST00000481401 NCAPD3P42695 1498 aa25.16■■□□□ 1.62
TNFRSF25-214ENST00000481401 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
TNFRSF25-214ENST00000481401 NESP48681 1621 aa24.97■■□□□ 1.59
TNFRSF25-214ENST00000481401 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
TNFRSF25-214ENST00000481401 HMGXB3Q12766 1538 aa24.94■■□□□ 1.58
TNFRSF25-214ENST00000481401 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
TNFRSF25-214ENST00000481401 THOC2Q8NI27 1593 aaKnown RBP24.81■■□□□ 1.56
TNFRSF25-214ENST00000481401 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
TNFRSF25-214ENST00000481401 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
TNFRSF25-214ENST00000481401 BAZ1AQ9NRL2 1556 aaPredicted RBP24.69■■□□□ 1.54
TNFRSF25-214ENST00000481401 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
TNFRSF25-214ENST00000481401 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
TNFRSF25-214ENST00000481401 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
TNFRSF25-214ENST00000481401 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
TNFRSF25-214ENST00000481401 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
TNFRSF25-214ENST00000481401 MRC2Q9UBG0 1479 aa24.39■■□□□ 1.5
TNFRSF25-214ENST00000481401 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
TNFRSF25-214ENST00000481401 WDR62O43379 1518 aa24.35■■□□□ 1.49
TNFRSF25-214ENST00000481401 WIZO95785 1651 aa24.2■■□□□ 1.46
TNFRSF25-214ENST00000481401 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
TNFRSF25-214ENST00000481401 OSCARQ8IYS5 282 aa24.14■■□□□ 1.45
TNFRSF25-214ENST00000481401 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
TNFRSF25-214ENST00000481401 CFTRP13569 1480 aa23.99■■□□□ 1.43
TNFRSF25-214ENST00000481401 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
TNFRSF25-214ENST00000481401 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
TNFRSF25-214ENST00000481401 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
TNFRSF25-214ENST00000481401 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
TNFRSF25-214ENST00000481401 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
TNFRSF25-214ENST00000481401 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
TNFRSF25-214ENST00000481401 ARHGEF11O15085 1522 aa23.76■■□□□ 1.39
TNFRSF25-214ENST00000481401 RSF1Q96T23 1441 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF25-214ENST00000481401 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF25-214ENST00000481401 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
TNFRSF25-214ENST00000481401 CYB5RLQ6IPT4 315 aa23.63■■□□□ 1.37
TNFRSF25-214ENST00000481401 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
TNFRSF25-214ENST00000481401 TOPBP1Q92547 1522 aa23.61■■□□□ 1.37
TNFRSF25-214ENST00000481401 CHD1O14646 1710 aa23.58■■□□□ 1.37
TNFRSF25-214ENST00000481401 TRHP20396 242 aaPredicted RBP23.55■■□□□ 1.36
TNFRSF25-214ENST00000481401 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
TNFRSF25-214ENST00000481401 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
TNFRSF25-214ENST00000481401 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
TNFRSF25-214ENST00000481401 DNMBPQ6XZF7 1577 aa23.48■■□□□ 1.35
TNFRSF25-214ENST00000481401 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.35
TNFRSF25-214ENST00000481401 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.34
TNFRSF25-214ENST00000481401 FBLN2P98095 1184 aa23.45■■□□□ 1.34
TNFRSF25-214ENST00000481401 POLA1P09884 1462 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF25-214ENST00000481401 RAD54L2Q9Y4B4 1467 aa23.27■■□□□ 1.32
TNFRSF25-214ENST00000481401 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
TNFRSF25-214ENST00000481401 AEBP2Q6ZN18 517 aaPredicted RBP23.24■■□□□ 1.31
TNFRSF25-214ENST00000481401 SOGA1O94964 1423 aa23.23■■□□□ 1.31
TNFRSF25-214ENST00000481401 CLASP1Q7Z460 1538 aa23.23■■□□□ 1.31
TNFRSF25-214ENST00000481401 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
TNFRSF25-214ENST00000481401 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
TNFRSF25-214ENST00000481401 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
TNFRSF25-214ENST00000481401 WDR97A6NE52 1622 aa23.15■■□□□ 1.3
TNFRSF25-214ENST00000481401 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
TNFRSF25-214ENST00000481401 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
TNFRSF25-214ENST00000481401 GRIN2BQ13224 1484 aa23.07■■□□□ 1.28
TNFRSF25-214ENST00000481401 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
TNFRSF25-214ENST00000481401 GAPVD1Q14C86 1478 aa23.02■■□□□ 1.28
TNFRSF25-214ENST00000481401 CUX1P39880 1505 aa23.02■■□□□ 1.28
TNFRSF25-214ENST00000481401 PBRM1Q86U86 1689 aa23.01■■□□□ 1.27
TNFRSF25-214ENST00000481401 SUPT5HO00267 1087 aaKnown RBP22.97■■□□□ 1.27
TNFRSF25-214ENST00000481401 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
TNFRSF25-214ENST00000481401 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
TNFRSF25-214ENST00000481401 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
TNFRSF25-214ENST00000481401 GRIN2AQ12879 1464 aa22.79■■□□□ 1.24
TNFRSF25-214ENST00000481401 CEP170Q5SW79 1584 aa22.76■■□□□ 1.23
TNFRSF25-214ENST00000481401 KIF13AQ9H1H9 1805 aa22.73■■□□□ 1.23
TNFRSF25-214ENST00000481401 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
TNFRSF25-214ENST00000481401 NUP160Q12769 1436 aa22.7■■□□□ 1.22
TNFRSF25-214ENST00000481401 SHROOM2Q13796 1616 aa22.7■■□□□ 1.22
TNFRSF25-214ENST00000481401 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
TNFRSF25-214ENST00000481401 FHAD1B1AJZ9 1412 aa22.6■■□□□ 1.21
TNFRSF25-214ENST00000481401 PRG4Q92954 1404 aaPredicted RBP22.56■■□□□ 1.2
TNFRSF25-214ENST00000481401 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
TNFRSF25-214ENST00000481401 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
TNFRSF25-214ENST00000481401 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
TNFRSF25-214ENST00000481401 FAM69CQ0P6D2 419 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms