RNA–Protein interactions for RNA: ENST00000481369.1

KDM5C-212, Transcript of lysine demethylase 5C, humanhuman

TSL 2

Gene KDM5C, Length 1,361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-212ENST00000481369 AEBP2Q6ZN18 517 aaPredicted RBP31.43■■■□□ 2.62
KDM5C-212ENST00000481369 CHIC1Q5VXU3 224 aa29.86■■■□□ 2.37
KDM5C-212ENST00000481369 NISCHQ9Y2I1 1504 aa28.34■■■□□ 2.13
KDM5C-212ENST00000481369 SENP3Q9H4L4 574 aaPredicted RBP26.87■■□□□ 1.89
KDM5C-212ENST00000481369 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
KDM5C-212ENST00000481369 ABCC9O60706 1549 aa25.79■■□□□ 1.72
KDM5C-212ENST00000481369 CCDC180Q9P1Z9 1646 aa25.61■■□□□ 1.69
KDM5C-212ENST00000481369 FOXD1Q16676 465 aa25■■□□□ 1.59
KDM5C-212ENST00000481369 DNAJC5BQ9UF47 199 aa24.53■■□□□ 1.52
KDM5C-212ENST00000481369 RB1CC1Q8TDY2 1594 aa24.49■■□□□ 1.51
KDM5C-212ENST00000481369 NACADO15069 1562 aa24.28■■□□□ 1.48
KDM5C-212ENST00000481369 UNC13AQ9UPW8 1703 aa23.95■■□□□ 1.42
KDM5C-212ENST00000481369 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
KDM5C-212ENST00000481369 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
KDM5C-212ENST00000481369 DCAF8L2P0C7V8 631 aa23.89■■□□□ 1.41
KDM5C-212ENST00000481369 PLPPR3Q6T4P5 718 aa23.87■■□□□ 1.41
KDM5C-212ENST00000481369 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
KDM5C-212ENST00000481369 SHROOM4Q9ULL8 1493 aa23.52■■□□□ 1.36
KDM5C-212ENST00000481369 MSH5O43196 834 aa23.46■■□□□ 1.35
KDM5C-212ENST00000481369 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
KDM5C-212ENST00000481369 ZCCHC6Q5VYS8 1495 aaKnown RBP23.42■■□□□ 1.34
KDM5C-212ENST00000481369 PIAS4Q8N2W9 510 aaPredicted RBP23.36■■□□□ 1.33
KDM5C-212ENST00000481369 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
KDM5C-212ENST00000481369 CC2D2AQ9P2K1 1620 aa23.34■■□□□ 1.33
KDM5C-212ENST00000481369 CECR2Q9BXF3 1484 aa23.31■■□□□ 1.32
KDM5C-212ENST00000481369 ADRA2BP18089 450 aa23.27■■□□□ 1.31
KDM5C-212ENST00000481369 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
KDM5C-212ENST00000481369 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
KDM5C-212ENST00000481369 POTEDQ86YR6 584 aa22.89■■□□□ 1.25
KDM5C-212ENST00000481369 DNAJC5Q9H3Z4 198 aa22.78■■□□□ 1.24
KDM5C-212ENST00000481369 CUX2O14529 1486 aa22.45■■□□□ 1.18
KDM5C-212ENST00000481369 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
KDM5C-212ENST00000481369 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
KDM5C-212ENST00000481369 ATAD2BQ9ULI0 1458 aa22.27■■□□□ 1.16
KDM5C-212ENST00000481369 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
KDM5C-212ENST00000481369 SMARCA2P51531 1590 aa22.2■■□□□ 1.14
KDM5C-212ENST00000481369 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
KDM5C-212ENST00000481369 NESP48681 1621 aa22.09■■□□□ 1.13
KDM5C-212ENST00000481369 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
KDM5C-212ENST00000481369 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.12
KDM5C-212ENST00000481369 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
KDM5C-212ENST00000481369 THOC2Q8NI27 1593 aaKnown RBP21.99■■□□□ 1.11
KDM5C-212ENST00000481369 LAMC3Q9Y6N6 1575 aa21.96■■□□□ 1.11
KDM5C-212ENST00000481369 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
KDM5C-212ENST00000481369 MROH2BQ7Z745 1585 aa21.81■■□□□ 1.08
KDM5C-212ENST00000481369 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
KDM5C-212ENST00000481369 CADPSQ9ULU8 1353 aa21.69■■□□□ 1.06
KDM5C-212ENST00000481369 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
KDM5C-212ENST00000481369 WDR62O43379 1518 aa21.61■■□□□ 1.05
KDM5C-212ENST00000481369 WIZO95785 1651 aa21.51■■□□□ 1.03
KDM5C-212ENST00000481369 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
KDM5C-212ENST00000481369 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
KDM5C-212ENST00000481369 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
KDM5C-212ENST00000481369 CFTRP13569 1480 aa21.39■■□□□ 1.02
KDM5C-212ENST00000481369 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
KDM5C-212ENST00000481369 MAPK8IP2Q13387 824 aaPredicted RBP21.37■■□□□ 1.01
KDM5C-212ENST00000481369 OSCARQ8IYS5 282 aa21.33■■□□□ 1
KDM5C-212ENST00000481369 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
KDM5C-212ENST00000481369 URB2Q14146 1524 aaKnown RBP21.27■■□□□ 1
KDM5C-212ENST00000481369 RSF1Q96T23 1441 aaPredicted RBP21.25■□□□□ 0.99
KDM5C-212ENST00000481369 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
KDM5C-212ENST00000481369 PRDM2Q13029 1718 aa21.16■□□□□ 0.98
KDM5C-212ENST00000481369 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
KDM5C-212ENST00000481369 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
KDM5C-212ENST00000481369 RIMBP3Q9UFD9 1639 aa21.09■□□□□ 0.97
KDM5C-212ENST00000481369 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
KDM5C-212ENST00000481369 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
KDM5C-212ENST00000481369 ARHGEF11O15085 1522 aa20.99■□□□□ 0.95
KDM5C-212ENST00000481369 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
KDM5C-212ENST00000481369 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
KDM5C-212ENST00000481369 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
KDM5C-212ENST00000481369 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
KDM5C-212ENST00000481369 PPP4R3CPQ6ZMV5 832 aa20.89■□□□□ 0.93
KDM5C-212ENST00000481369 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.93
KDM5C-212ENST00000481369 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
KDM5C-212ENST00000481369 CHD1O14646 1710 aa20.82■□□□□ 0.92
KDM5C-212ENST00000481369 AQRO60306 1485 aaKnown RBP eCLIP20.8■□□□□ 0.92
KDM5C-212ENST00000481369 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
KDM5C-212ENST00000481369 ARAP1Q96P48 1450 aa20.76■□□□□ 0.91
KDM5C-212ENST00000481369 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
KDM5C-212ENST00000481369 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
KDM5C-212ENST00000481369 FBLN2P98095 1184 aa20.65■□□□□ 0.9
KDM5C-212ENST00000481369 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
KDM5C-212ENST00000481369 SOGA1O94964 1423 aa20.63■□□□□ 0.89
KDM5C-212ENST00000481369 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
KDM5C-212ENST00000481369 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
KDM5C-212ENST00000481369 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
KDM5C-212ENST00000481369 SNAPC4Q5SXM2 1469 aa20.58■□□□□ 0.88
KDM5C-212ENST00000481369 MAGI1Q96QZ7 1491 aaPredicted RBP20.57■□□□□ 0.88
KDM5C-212ENST00000481369 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
KDM5C-212ENST00000481369 SYNJ1O43426 1573 aa20.55■□□□□ 0.88
KDM5C-212ENST00000481369 CNKSR2Q8WXI2 1034 aa20.54■□□□□ 0.88
KDM5C-212ENST00000481369 GRIN2BQ13224 1484 aa20.51■□□□□ 0.87
KDM5C-212ENST00000481369 HOXD11P31277 338 aaPredicted RBP20.51■□□□□ 0.87
KDM5C-212ENST00000481369 CUX1P39880 1505 aa20.51■□□□□ 0.87
KDM5C-212ENST00000481369 CHMP7Q8WUX9 453 aaPredicted RBP20.5■□□□□ 0.87
KDM5C-212ENST00000481369 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
KDM5C-212ENST00000481369 PBRM1Q86U86 1689 aa20.4■□□□□ 0.86
KDM5C-212ENST00000481369 GAPVD1Q14C86 1478 aa20.38■□□□□ 0.85
KDM5C-212ENST00000481369 DCAF8L1A6NGE4 600 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms