RNA–Protein interactions for RNA: ENST00000481357.1

TFIP11-213, Transcript of tuftelin interacting protein 11, humanhuman

TSL 2

Gene TFIP11, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFIP11-213ENST00000481357 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
TFIP11-213ENST00000481357 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
TFIP11-213ENST00000481357 ABCC9O60706 1549 aa31.33■■■□□ 2.61
TFIP11-213ENST00000481357 RB1CC1Q8TDY2 1594 aa29.87■■■□□ 2.37
TFIP11-213ENST00000481357 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
TFIP11-213ENST00000481357 NACADO15069 1562 aa29.69■■■□□ 2.34
TFIP11-213ENST00000481357 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
TFIP11-213ENST00000481357 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
TFIP11-213ENST00000481357 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
TFIP11-213ENST00000481357 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.26
TFIP11-213ENST00000481357 DCAF1Q9Y4B6 1507 aa29.04■■■□□ 2.24
TFIP11-213ENST00000481357 DNAJC5BQ9UF47 199 aa29.03■■■□□ 2.24
TFIP11-213ENST00000481357 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.24
TFIP11-213ENST00000481357 SCRIBQ14160 1630 aa28.91■■■□□ 2.22
TFIP11-213ENST00000481357 SHROOM4Q9ULL8 1493 aa28.46■■■□□ 2.15
TFIP11-213ENST00000481357 CC2D2AQ9P2K1 1620 aa28.3■■■□□ 2.12
TFIP11-213ENST00000481357 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
TFIP11-213ENST00000481357 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
TFIP11-213ENST00000481357 SMARCA4P51532 1647 aa27.52■■■□□ 2
TFIP11-213ENST00000481357 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
TFIP11-213ENST00000481357 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
TFIP11-213ENST00000481357 NCAPD3P42695 1498 aa27.35■■□□□ 1.97
TFIP11-213ENST00000481357 SMARCA2P51531 1590 aa27.33■■□□□ 1.97
TFIP11-213ENST00000481357 MROH2BQ7Z745 1585 aa27.25■■□□□ 1.95
TFIP11-213ENST00000481357 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
TFIP11-213ENST00000481357 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
TFIP11-213ENST00000481357 PEG3Q9GZU2 1588 aa27.13■■□□□ 1.93
TFIP11-213ENST00000481357 WIZO95785 1651 aa27.01■■□□□ 1.92
TFIP11-213ENST00000481357 NESP48681 1621 aa27.01■■□□□ 1.91
TFIP11-213ENST00000481357 ERCC6Q03468 1493 aa27■■□□□ 1.91
TFIP11-213ENST00000481357 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
TFIP11-213ENST00000481357 KIF21AQ7Z4S6 1674 aa26.73■■□□□ 1.87
TFIP11-213ENST00000481357 CUX2O14529 1486 aa26.73■■□□□ 1.87
TFIP11-213ENST00000481357 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
TFIP11-213ENST00000481357 THOC2Q8NI27 1593 aaKnown RBP26.65■■□□□ 1.86
TFIP11-213ENST00000481357 TOP2AP11388 1531 aaKnown RBP26.59■■□□□ 1.85
TFIP11-213ENST00000481357 CADPSQ9ULU8 1353 aa26.57■■□□□ 1.84
TFIP11-213ENST00000481357 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
TFIP11-213ENST00000481357 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
TFIP11-213ENST00000481357 CEP164Q9UPV0 1460 aa26.35■■□□□ 1.81
TFIP11-213ENST00000481357 CFTRP13569 1480 aa26.34■■□□□ 1.81
TFIP11-213ENST00000481357 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
TFIP11-213ENST00000481357 DNAJC5Q9H3Z4 198 aa26.32■■□□□ 1.8
TFIP11-213ENST00000481357 WDR62O43379 1518 aa26.29■■□□□ 1.8
TFIP11-213ENST00000481357 CCDC88BA6NC98 1476 aa26.28■■□□□ 1.8
TFIP11-213ENST00000481357 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
TFIP11-213ENST00000481357 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
TFIP11-213ENST00000481357 SUPT5HO00267 1087 aaKnown RBP25.92■■□□□ 1.74
TFIP11-213ENST00000481357 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
TFIP11-213ENST00000481357 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
TFIP11-213ENST00000481357 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
TFIP11-213ENST00000481357 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
TFIP11-213ENST00000481357 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
TFIP11-213ENST00000481357 EIF4G3O43432 1585 aaKnown RBP25.69■■□□□ 1.7
TFIP11-213ENST00000481357 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
TFIP11-213ENST00000481357 POLA1P09884 1462 aaPredicted RBP25.64■■□□□ 1.69
TFIP11-213ENST00000481357 RAD54L2Q9Y4B4 1467 aa25.59■■□□□ 1.69
TFIP11-213ENST00000481357 CUX1P39880 1505 aa25.58■■□□□ 1.69
TFIP11-213ENST00000481357 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.68
TFIP11-213ENST00000481357 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
TFIP11-213ENST00000481357 OSCARQ8IYS5 282 aa25.55■■□□□ 1.68
TFIP11-213ENST00000481357 CHD1O14646 1710 aa25.5■■□□□ 1.67
TFIP11-213ENST00000481357 SOGA1O94964 1423 aa25.5■■□□□ 1.67
TFIP11-213ENST00000481357 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
TFIP11-213ENST00000481357 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
TFIP11-213ENST00000481357 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
TFIP11-213ENST00000481357 FBLN2P98095 1184 aa25.38■■□□□ 1.65
TFIP11-213ENST00000481357 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
TFIP11-213ENST00000481357 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
TFIP11-213ENST00000481357 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
TFIP11-213ENST00000481357 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
TFIP11-213ENST00000481357 PBRM1Q86U86 1689 aa25.32■■□□□ 1.64
TFIP11-213ENST00000481357 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
TFIP11-213ENST00000481357 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
TFIP11-213ENST00000481357 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
TFIP11-213ENST00000481357 ARHGEF11O15085 1522 aa25.23■■□□□ 1.63
TFIP11-213ENST00000481357 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
TFIP11-213ENST00000481357 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
TFIP11-213ENST00000481357 ABCA5Q8WWZ7 1642 aa25.22■■□□□ 1.63
TFIP11-213ENST00000481357 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
TFIP11-213ENST00000481357 ABCA10Q8WWZ4 1543 aa25.21■■□□□ 1.63
TFIP11-213ENST00000481357 MAGI1Q96QZ7 1491 aaPredicted RBP25.19■■□□□ 1.62
TFIP11-213ENST00000481357 CHMP7Q8WUX9 453 aaPredicted RBP25.15■■□□□ 1.62
TFIP11-213ENST00000481357 SYNJ2O15056 1496 aa25.11■■□□□ 1.61
TFIP11-213ENST00000481357 CLASP1Q7Z460 1538 aa25.07■■□□□ 1.6
TFIP11-213ENST00000481357 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
TFIP11-213ENST00000481357 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
TFIP11-213ENST00000481357 ARAP1Q96P48 1450 aa25.02■■□□□ 1.6
TFIP11-213ENST00000481357 GRIN2AQ12879 1464 aa24.94■■□□□ 1.58
TFIP11-213ENST00000481357 CEP170Q5SW79 1584 aa24.9■■□□□ 1.58
TFIP11-213ENST00000481357 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
TFIP11-213ENST00000481357 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
TFIP11-213ENST00000481357 ERCC6L2Q5T890 1561 aa24.81■■□□□ 1.56
TFIP11-213ENST00000481357 NUP160Q12769 1436 aa24.79■■□□□ 1.56
TFIP11-213ENST00000481357 KIF27Q86VH2 1401 aa24.7■■□□□ 1.55
TFIP11-213ENST00000481357 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
TFIP11-213ENST00000481357 TRHP20396 242 aaPredicted RBP24.69■■□□□ 1.54
TFIP11-213ENST00000481357 RUSC2Q8N2Y8 1516 aa24.67■■□□□ 1.54
TFIP11-213ENST00000481357 CUL7Q14999 1698 aa24.66■■□□□ 1.54
TFIP11-213ENST00000481357 IGF1RP08069 1367 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms