RNA–Protein interactions for RNA: ENST00000481356.1

SRPRB-203, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 1,487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-203ENST00000481356 NISCHQ9Y2I1 1504 aa27.13■■□□□ 1.93
SRPRB-203ENST00000481356 CCDC180Q9P1Z9 1646 aa24.19■■□□□ 1.46
SRPRB-203ENST00000481356 ABCC9O60706 1549 aa23.81■■□□□ 1.4
SRPRB-203ENST00000481356 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
SRPRB-203ENST00000481356 DCAF8L2P0C7V8 631 aa22.76■■□□□ 1.23
SRPRB-203ENST00000481356 NACADO15069 1562 aa22.71■■□□□ 1.23
SRPRB-203ENST00000481356 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.21
SRPRB-203ENST00000481356 UNC13AQ9UPW8 1703 aa22.46■■□□□ 1.19
SRPRB-203ENST00000481356 MYO15BQ96JP2 1530 aa22.45■■□□□ 1.19
SRPRB-203ENST00000481356 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
SRPRB-203ENST00000481356 PABPN1Q86U42 306 aaKnown RBP eCLIP22.22■■□□□ 1.15
SRPRB-203ENST00000481356 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
SRPRB-203ENST00000481356 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
SRPRB-203ENST00000481356 SCRIBQ14160 1630 aa22.16■■□□□ 1.14
SRPRB-203ENST00000481356 DNAJC5BQ9UF47 199 aa21.93■■□□□ 1.1
SRPRB-203ENST00000481356 SHROOM4Q9ULL8 1493 aa21.74■■□□□ 1.07
SRPRB-203ENST00000481356 EIF4G1Q04637 1599 aaKnown RBP21.56■■□□□ 1.04
SRPRB-203ENST00000481356 CC2D2AQ9P2K1 1620 aa21.53■■□□□ 1.04
SRPRB-203ENST00000481356 CECR2Q9BXF3 1484 aa21.35■■□□□ 1.01
SRPRB-203ENST00000481356 SMARCA4P51532 1647 aa21.12■□□□□ 0.97
SRPRB-203ENST00000481356 BAZ1AQ9NRL2 1556 aaPredicted RBP21.02■□□□□ 0.96
SRPRB-203ENST00000481356 CHIC1Q5VXU3 224 aa21.01■□□□□ 0.95
SRPRB-203ENST00000481356 ATAD2BQ9ULI0 1458 aa20.97■□□□□ 0.95
SRPRB-203ENST00000481356 MROH2BQ7Z745 1585 aa20.96■□□□□ 0.95
SRPRB-203ENST00000481356 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
SRPRB-203ENST00000481356 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
SRPRB-203ENST00000481356 HMGXB3Q12766 1538 aa20.85■□□□□ 0.93
SRPRB-203ENST00000481356 PEG3Q9GZU2 1588 aa20.84■□□□□ 0.93
SRPRB-203ENST00000481356 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
SRPRB-203ENST00000481356 WIZO95785 1651 aa20.8■□□□□ 0.92
SRPRB-203ENST00000481356 RSF1Q96T23 1441 aaPredicted RBP20.63■□□□□ 0.89
SRPRB-203ENST00000481356 NESP48681 1621 aa20.6■□□□□ 0.89
SRPRB-203ENST00000481356 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
SRPRB-203ENST00000481356 ERCC6Q03468 1493 aa20.48■□□□□ 0.87
SRPRB-203ENST00000481356 LAMC3Q9Y6N6 1575 aa20.44■□□□□ 0.86
SRPRB-203ENST00000481356 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
SRPRB-203ENST00000481356 CADPSQ9ULU8 1353 aa20.32■□□□□ 0.84
SRPRB-203ENST00000481356 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
SRPRB-203ENST00000481356 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
SRPRB-203ENST00000481356 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
SRPRB-203ENST00000481356 CUX2O14529 1486 aa20.23■□□□□ 0.83
SRPRB-203ENST00000481356 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
SRPRB-203ENST00000481356 CFTRP13569 1480 aa20.19■□□□□ 0.82
SRPRB-203ENST00000481356 FANCD2Q9BXW9 1451 aa20.14■□□□□ 0.82
SRPRB-203ENST00000481356 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
SRPRB-203ENST00000481356 MRC2Q9UBG0 1479 aa20.11■□□□□ 0.81
SRPRB-203ENST00000481356 SUPT5HO00267 1087 aaKnown RBP20.11■□□□□ 0.81
SRPRB-203ENST00000481356 WDR62O43379 1518 aa20.05■□□□□ 0.8
SRPRB-203ENST00000481356 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
SRPRB-203ENST00000481356 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
SRPRB-203ENST00000481356 DNMBPQ6XZF7 1577 aa19.8■□□□□ 0.76
SRPRB-203ENST00000481356 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
SRPRB-203ENST00000481356 ABCC8Q09428 1581 aa19.71■□□□□ 0.75
SRPRB-203ENST00000481356 ZNF608Q9ULD9 1512 aaPredicted RBP19.68■□□□□ 0.74
SRPRB-203ENST00000481356 IFT140Q96RY7 1462 aa19.67■□□□□ 0.74
SRPRB-203ENST00000481356 CUX1P39880 1505 aa19.67■□□□□ 0.74
SRPRB-203ENST00000481356 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.74
SRPRB-203ENST00000481356 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
SRPRB-203ENST00000481356 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
SRPRB-203ENST00000481356 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
SRPRB-203ENST00000481356 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
SRPRB-203ENST00000481356 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
SRPRB-203ENST00000481356 SOGA1O94964 1423 aa19.54■□□□□ 0.72
SRPRB-203ENST00000481356 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
SRPRB-203ENST00000481356 SYNJ1O43426 1573 aa19.5■□□□□ 0.71
SRPRB-203ENST00000481356 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
SRPRB-203ENST00000481356 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
SRPRB-203ENST00000481356 CHD1O14646 1710 aa19.45■□□□□ 0.7
SRPRB-203ENST00000481356 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
SRPRB-203ENST00000481356 WRNQ14191 1432 aaPredicted RBP eCLIP19.44■□□□□ 0.7
SRPRB-203ENST00000481356 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
SRPRB-203ENST00000481356 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
SRPRB-203ENST00000481356 SNAPC4Q5SXM2 1469 aa19.36■□□□□ 0.69
SRPRB-203ENST00000481356 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
SRPRB-203ENST00000481356 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
SRPRB-203ENST00000481356 FBLN2P98095 1184 aa19.32■□□□□ 0.68
SRPRB-203ENST00000481356 GAPVD1Q14C86 1478 aa19.32■□□□□ 0.68
SRPRB-203ENST00000481356 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
SRPRB-203ENST00000481356 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
SRPRB-203ENST00000481356 MAGI1Q96QZ7 1491 aaPredicted RBP19.26■□□□□ 0.67
SRPRB-203ENST00000481356 RIMBP3CA6NJZ7 1639 aa19.21■□□□□ 0.67
SRPRB-203ENST00000481356 RIMBP3BA6NNM3 1639 aa19.21■□□□□ 0.67
SRPRB-203ENST00000481356 RIMBP3Q9UFD9 1639 aa19.21■□□□□ 0.67
SRPRB-203ENST00000481356 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
SRPRB-203ENST00000481356 CHMP7Q8WUX9 453 aaPredicted RBP19.19■□□□□ 0.66
SRPRB-203ENST00000481356 ADAMTS12P58397 1594 aa19.18■□□□□ 0.66
SRPRB-203ENST00000481356 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
SRPRB-203ENST00000481356 ARHGEF11O15085 1522 aa19.14■□□□□ 0.65
SRPRB-203ENST00000481356 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
SRPRB-203ENST00000481356 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
SRPRB-203ENST00000481356 GRIN2AQ12879 1464 aa19.08■□□□□ 0.65
SRPRB-203ENST00000481356 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
SRPRB-203ENST00000481356 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
SRPRB-203ENST00000481356 KIF27Q86VH2 1401 aa19.02■□□□□ 0.64
SRPRB-203ENST00000481356 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
SRPRB-203ENST00000481356 CUL7Q14999 1698 aa18.98■□□□□ 0.63
SRPRB-203ENST00000481356 NUP160Q12769 1436 aa18.97■□□□□ 0.63
SRPRB-203ENST00000481356 IGF1RP08069 1367 aa18.96■□□□□ 0.63
SRPRB-203ENST00000481356 RUSC2Q8N2Y8 1516 aa18.96■□□□□ 0.63
SRPRB-203ENST00000481356 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 228.3 ms