RNA–Protein interactions for RNA: ENST00000481320.5

NSMCE4A-209, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 1,345 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-209ENST00000481320 NISCHQ9Y2I1 1504 aa46.12■■■■■ 4.97
NSMCE4A-209ENST00000481320 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
NSMCE4A-209ENST00000481320 ABCC9O60706 1549 aa40.74■■■■■ 4.11
NSMCE4A-209ENST00000481320 RB1CC1Q8TDY2 1594 aa39.03■■■■□ 3.84
NSMCE4A-209ENST00000481320 DCAF8L2P0C7V8 631 aa38.92■■■■□ 3.82
NSMCE4A-209ENST00000481320 NACADO15069 1562 aa38.87■■■■□ 3.81
NSMCE4A-209ENST00000481320 MYO15BQ96JP2 1530 aa38.49■■■■□ 3.75
NSMCE4A-209ENST00000481320 ZCCHC6Q5VYS8 1495 aaKnown RBP38.26■■■■□ 3.72
NSMCE4A-209ENST00000481320 DCAF1Q9Y4B6 1507 aa38.14■■■■□ 3.7
NSMCE4A-209ENST00000481320 PABPN1Q86U42 306 aaKnown RBP eCLIP38.07■■■■□ 3.68
NSMCE4A-209ENST00000481320 UNC13AQ9UPW8 1703 aa38.04■■■■□ 3.68
NSMCE4A-209ENST00000481320 DNAJC5BQ9UF47 199 aa37.92■■■■□ 3.66
NSMCE4A-209ENST00000481320 BICRAQ9NZM4 1560 aa37.76■■■■□ 3.63
NSMCE4A-209ENST00000481320 SCRIBQ14160 1630 aa37.51■■■■□ 3.6
NSMCE4A-209ENST00000481320 SHROOM4Q9ULL8 1493 aa37.4■■■■□ 3.58
NSMCE4A-209ENST00000481320 EIF4G1Q04637 1599 aaKnown RBP36.85■■■■□ 3.49
NSMCE4A-209ENST00000481320 CC2D2AQ9P2K1 1620 aa36.81■■■■□ 3.48
NSMCE4A-209ENST00000481320 CECR2Q9BXF3 1484 aa36.68■■■■□ 3.46
NSMCE4A-209ENST00000481320 NCAPD3P42695 1498 aa35.88■■■■□ 3.33
NSMCE4A-209ENST00000481320 SMARCA4P51532 1647 aa35.85■■■■□ 3.33
NSMCE4A-209ENST00000481320 ATAD2BQ9ULI0 1458 aa35.8■■■■□ 3.32
NSMCE4A-209ENST00000481320 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
NSMCE4A-209ENST00000481320 SMARCA2P51531 1590 aa35.76■■■■□ 3.32
NSMCE4A-209ENST00000481320 HMGXB3Q12766 1538 aa35.6■■■■□ 3.29
NSMCE4A-209ENST00000481320 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.27
NSMCE4A-209ENST00000481320 BAZ1BQ9UIG0 1483 aaKnown RBP35.5■■■■□ 3.27
NSMCE4A-209ENST00000481320 PEG3Q9GZU2 1588 aa35.5■■■■□ 3.27
NSMCE4A-209ENST00000481320 ERCC6Q03468 1493 aa35.21■■■■□ 3.23
NSMCE4A-209ENST00000481320 WIZO95785 1651 aa35.1■■■■□ 3.21
NSMCE4A-209ENST00000481320 NESP48681 1621 aa35.09■■■■□ 3.21
NSMCE4A-209ENST00000481320 LAMC3Q9Y6N6 1575 aa34.99■■■■□ 3.19
NSMCE4A-209ENST00000481320 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
NSMCE4A-209ENST00000481320 CUX2O14529 1486 aa34.97■■■■□ 3.19
NSMCE4A-209ENST00000481320 DNAJC5Q9H3Z4 198 aa34.93■■■■□ 3.18
NSMCE4A-209ENST00000481320 PDS5BQ9NTI5 1447 aa34.85■■■■□ 3.17
NSMCE4A-209ENST00000481320 CADPSQ9ULU8 1353 aa34.84■■■■□ 3.17
NSMCE4A-209ENST00000481320 TOP2AP11388 1531 aaKnown RBP34.7■■■■□ 3.15
NSMCE4A-209ENST00000481320 KIF21AQ7Z4S6 1674 aa34.65■■■■□ 3.14
NSMCE4A-209ENST00000481320 THOC2Q8NI27 1593 aaKnown RBP34.6■■■■□ 3.13
NSMCE4A-209ENST00000481320 CFTRP13569 1480 aa34.49■■■■□ 3.11
NSMCE4A-209ENST00000481320 MRC2Q9UBG0 1479 aa34.43■■■■□ 3.1
NSMCE4A-209ENST00000481320 FANCD2Q9BXW9 1451 aa34.4■■■■□ 3.1
NSMCE4A-209ENST00000481320 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
NSMCE4A-209ENST00000481320 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
NSMCE4A-209ENST00000481320 WDR62O43379 1518 aa34.28■■■■□ 3.08
NSMCE4A-209ENST00000481320 PRDM2Q13029 1718 aa34.14■■■■□ 3.06
NSMCE4A-209ENST00000481320 URB2Q14146 1524 aaKnown RBP34.04■■■■□ 3.04
NSMCE4A-209ENST00000481320 SUPT5HO00267 1087 aaKnown RBP33.89■■■■□ 3.02
NSMCE4A-209ENST00000481320 ABCC8Q09428 1581 aa33.86■■■■□ 3.01
NSMCE4A-209ENST00000481320 TOPBP1Q92547 1522 aa33.78■■■■□ 3
NSMCE4A-209ENST00000481320 IFT140Q96RY7 1462 aa33.71■■■□□ 2.99
NSMCE4A-209ENST00000481320 DNMBPQ6XZF7 1577 aa33.69■■■□□ 2.98
NSMCE4A-209ENST00000481320 OSCARQ8IYS5 282 aa33.59■■■□□ 2.97
NSMCE4A-209ENST00000481320 ZNF608Q9ULD9 1512 aaPredicted RBP33.54■■■□□ 2.96
NSMCE4A-209ENST00000481320 POLA1P09884 1462 aaPredicted RBP33.45■■■□□ 2.95
NSMCE4A-209ENST00000481320 TARBP1Q13395 1621 aaKnown RBP33.41■■■□□ 2.94
NSMCE4A-209ENST00000481320 SOGA1O94964 1423 aa33.41■■■□□ 2.94
NSMCE4A-209ENST00000481320 TRIM41Q8WV44 630 aa33.37■■■□□ 2.93
NSMCE4A-209ENST00000481320 AQRO60306 1485 aaKnown RBP eCLIP33.35■■■□□ 2.93
NSMCE4A-209ENST00000481320 EIF4G3O43432 1585 aaKnown RBP33.35■■■□□ 2.93
NSMCE4A-209ENST00000481320 CUX1P39880 1505 aa33.33■■■□□ 2.93
NSMCE4A-209ENST00000481320 RAD54L2Q9Y4B4 1467 aa33.33■■■□□ 2.93
NSMCE4A-209ENST00000481320 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
NSMCE4A-209ENST00000481320 TDRD9Q8NDG6 1382 aaKnown RBP33.25■■■□□ 2.91
NSMCE4A-209ENST00000481320 FBLN2P98095 1184 aa33.17■■■□□ 2.9
NSMCE4A-209ENST00000481320 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
NSMCE4A-209ENST00000481320 CHD1O14646 1710 aa33.04■■■□□ 2.88
NSMCE4A-209ENST00000481320 GRIN2BQ13224 1484 aa33.03■■■□□ 2.88
NSMCE4A-209ENST00000481320 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
NSMCE4A-209ENST00000481320 CHMP7Q8WUX9 453 aaPredicted RBP33.02■■■□□ 2.88
NSMCE4A-209ENST00000481320 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
NSMCE4A-209ENST00000481320 ABCA10Q8WWZ4 1543 aa32.99■■■□□ 2.87
NSMCE4A-209ENST00000481320 GAPVD1Q14C86 1478 aa32.98■■■□□ 2.87
NSMCE4A-209ENST00000481320 MAGI1Q96QZ7 1491 aaPredicted RBP32.97■■■□□ 2.87
NSMCE4A-209ENST00000481320 TOP2BQ02880 1626 aa32.95■■■□□ 2.87
NSMCE4A-209ENST00000481320 BIVM-ERCC5R4GMW8 1640 aa32.93■■■□□ 2.86
NSMCE4A-209ENST00000481320 RIMBP3CA6NJZ7 1639 aa32.9■■■□□ 2.86
NSMCE4A-209ENST00000481320 RIMBP3BA6NNM3 1639 aa32.9■■■□□ 2.86
NSMCE4A-209ENST00000481320 RIMBP3Q9UFD9 1639 aa32.9■■■□□ 2.86
NSMCE4A-209ENST00000481320 SYNJ1O43426 1573 aa32.87■■■□□ 2.85
NSMCE4A-209ENST00000481320 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
NSMCE4A-209ENST00000481320 SYNJ2O15056 1496 aa32.85■■■□□ 2.85
NSMCE4A-209ENST00000481320 PBRM1Q86U86 1689 aa32.84■■■□□ 2.85
NSMCE4A-209ENST00000481320 ABCA5Q8WWZ7 1642 aa32.82■■■□□ 2.84
NSMCE4A-209ENST00000481320 CYB5RLQ6IPT4 315 aa32.74■■■□□ 2.83
NSMCE4A-209ENST00000481320 CLASP1Q7Z460 1538 aa32.66■■■□□ 2.82
NSMCE4A-209ENST00000481320 ERICH3Q5RHP9 1530 aa32.6■■■□□ 2.81
NSMCE4A-209ENST00000481320 FHAD1B1AJZ9 1412 aa32.59■■■□□ 2.81
NSMCE4A-209ENST00000481320 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
NSMCE4A-209ENST00000481320 ARAP1Q96P48 1450 aa32.54■■■□□ 2.8
NSMCE4A-209ENST00000481320 ADAMTS12P58397 1594 aa32.54■■■□□ 2.8
NSMCE4A-209ENST00000481320 NUP160Q12769 1436 aa32.42■■■□□ 2.78
NSMCE4A-209ENST00000481320 KIF27Q86VH2 1401 aa32.41■■■□□ 2.78
NSMCE4A-209ENST00000481320 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
NSMCE4A-209ENST00000481320 IGF1RP08069 1367 aa32.33■■■□□ 2.77
NSMCE4A-209ENST00000481320 TRHP20396 242 aaPredicted RBP32.26■■■□□ 2.76
NSMCE4A-209ENST00000481320 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
NSMCE4A-209ENST00000481320 SHROOM2Q13796 1616 aa32.19■■■□□ 2.74
NSMCE4A-209ENST00000481320 CUL7Q14999 1698 aa32.19■■■□□ 2.74
NSMCE4A-209ENST00000481320 CARMIL1Q5VZK9 1371 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms