RNA–Protein interactions for RNA: ENST00000481278.5

TMCO1-206, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-206ENST00000481278 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
TMCO1-206ENST00000481278 ABCC9O60706 1549 aa25■■□□□ 1.59
TMCO1-206ENST00000481278 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
TMCO1-206ENST00000481278 DNAJC5BQ9UF47 199 aa23.92■■□□□ 1.42
TMCO1-206ENST00000481278 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
TMCO1-206ENST00000481278 NACADO15069 1562 aa23.4■■□□□ 1.34
TMCO1-206ENST00000481278 PABPN1Q86U42 306 aaKnown RBP eCLIP23.2■■□□□ 1.3
TMCO1-206ENST00000481278 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
TMCO1-206ENST00000481278 BICRAQ9NZM4 1560 aa23.09■■□□□ 1.29
TMCO1-206ENST00000481278 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
TMCO1-206ENST00000481278 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
TMCO1-206ENST00000481278 SHROOM4Q9ULL8 1493 aa22.67■■□□□ 1.22
TMCO1-206ENST00000481278 ZCCHC6Q5VYS8 1495 aaKnown RBP22.61■■□□□ 1.21
TMCO1-206ENST00000481278 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
TMCO1-206ENST00000481278 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
TMCO1-206ENST00000481278 CECR2Q9BXF3 1484 aa22.57■■□□□ 1.2
TMCO1-206ENST00000481278 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
TMCO1-206ENST00000481278 SCRIBQ14160 1630 aa22.41■■□□□ 1.18
TMCO1-206ENST00000481278 DNAJC5Q9H3Z4 198 aa22.15■■□□□ 1.14
TMCO1-206ENST00000481278 CUX2O14529 1486 aa21.72■■□□□ 1.07
TMCO1-206ENST00000481278 NCAPD3P42695 1498 aa21.66■■□□□ 1.06
TMCO1-206ENST00000481278 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
TMCO1-206ENST00000481278 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
TMCO1-206ENST00000481278 HMGXB3Q12766 1538 aa21.45■■□□□ 1.02
TMCO1-206ENST00000481278 NESP48681 1621 aa21.43■■□□□ 1.02
TMCO1-206ENST00000481278 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
TMCO1-206ENST00000481278 SMARCA2P51531 1590 aa21.37■■□□□ 1.01
TMCO1-206ENST00000481278 THOC2Q8NI27 1593 aaKnown RBP21.31■■□□□ 1
TMCO1-206ENST00000481278 PEG3Q9GZU2 1588 aa21.25■□□□□ 0.99
TMCO1-206ENST00000481278 BAZ1BQ9UIG0 1483 aaKnown RBP21.21■□□□□ 0.99
TMCO1-206ENST00000481278 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
TMCO1-206ENST00000481278 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
TMCO1-206ENST00000481278 MROH2BQ7Z745 1585 aa21.08■□□□□ 0.97
TMCO1-206ENST00000481278 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
TMCO1-206ENST00000481278 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
TMCO1-206ENST00000481278 CADPSQ9ULU8 1353 aa20.94■□□□□ 0.94
TMCO1-206ENST00000481278 WDR62O43379 1518 aa20.91■□□□□ 0.94
TMCO1-206ENST00000481278 MRC2Q9UBG0 1479 aa20.9■□□□□ 0.94
TMCO1-206ENST00000481278 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
TMCO1-206ENST00000481278 WIZO95785 1651 aa20.75■□□□□ 0.91
TMCO1-206ENST00000481278 CEP164Q9UPV0 1460 aa20.71■□□□□ 0.91
TMCO1-206ENST00000481278 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
TMCO1-206ENST00000481278 CFTRP13569 1480 aa20.67■□□□□ 0.9
TMCO1-206ENST00000481278 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
TMCO1-206ENST00000481278 OSCARQ8IYS5 282 aa20.58■□□□□ 0.89
TMCO1-206ENST00000481278 RSF1Q96T23 1441 aaPredicted RBP20.51■□□□□ 0.87
TMCO1-206ENST00000481278 TOP2AP11388 1531 aaKnown RBP20.48■□□□□ 0.87
TMCO1-206ENST00000481278 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
TMCO1-206ENST00000481278 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
TMCO1-206ENST00000481278 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
TMCO1-206ENST00000481278 ZNF608Q9ULD9 1512 aaPredicted RBP20.41■□□□□ 0.86
TMCO1-206ENST00000481278 ARHGEF11O15085 1522 aa20.35■□□□□ 0.85
TMCO1-206ENST00000481278 IFT140Q96RY7 1462 aa20.33■□□□□ 0.85
TMCO1-206ENST00000481278 PRDM2Q13029 1718 aa20.3■□□□□ 0.84
TMCO1-206ENST00000481278 TOPBP1Q92547 1522 aa20.27■□□□□ 0.84
TMCO1-206ENST00000481278 CCDC88BA6NC98 1476 aa20.25■□□□□ 0.83
TMCO1-206ENST00000481278 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
TMCO1-206ENST00000481278 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
TMCO1-206ENST00000481278 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
TMCO1-206ENST00000481278 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
TMCO1-206ENST00000481278 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
TMCO1-206ENST00000481278 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.811e-7■■■■■ 30.4
TMCO1-206ENST00000481278 CYB5RLQ6IPT4 315 aa20.11■□□□□ 0.81
TMCO1-206ENST00000481278 CHD1O14646 1710 aa20.1■□□□□ 0.81
TMCO1-206ENST00000481278 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
TMCO1-206ENST00000481278 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
TMCO1-206ENST00000481278 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
TMCO1-206ENST00000481278 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
TMCO1-206ENST00000481278 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
TMCO1-206ENST00000481278 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
TMCO1-206ENST00000481278 SOGA1O94964 1423 aa19.89■□□□□ 0.77
TMCO1-206ENST00000481278 FBLN2P98095 1184 aa19.89■□□□□ 0.77
TMCO1-206ENST00000481278 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
TMCO1-206ENST00000481278 FGD5Q6ZNL6 1462 aa19.85■□□□□ 0.77
TMCO1-206ENST00000481278 MAGI1Q96QZ7 1491 aaPredicted RBP19.83■□□□□ 0.76
TMCO1-206ENST00000481278 CUX1P39880 1505 aa19.82■□□□□ 0.76
TMCO1-206ENST00000481278 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
TMCO1-206ENST00000481278 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
TMCO1-206ENST00000481278 SYNJ2O15056 1496 aa19.77■□□□□ 0.76
TMCO1-206ENST00000481278 CHMP7Q8WUX9 453 aaPredicted RBP19.73■□□□□ 0.75
TMCO1-206ENST00000481278 GAPVD1Q14C86 1478 aa19.7■□□□□ 0.74
TMCO1-206ENST00000481278 ABCA5Q8WWZ7 1642 aa19.65■□□□□ 0.74
TMCO1-206ENST00000481278 ERCC6L2Q5T890 1561 aa19.64■□□□□ 0.73
TMCO1-206ENST00000481278 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
TMCO1-206ENST00000481278 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
TMCO1-206ENST00000481278 NUP160Q12769 1436 aa19.56■□□□□ 0.72
TMCO1-206ENST00000481278 AEBP2Q6ZN18 517 aaPredicted RBP19.55■□□□□ 0.72
TMCO1-206ENST00000481278 GRIN2AQ12879 1464 aa19.54■□□□□ 0.72
TMCO1-206ENST00000481278 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
TMCO1-206ENST00000481278 ADAMTS12P58397 1594 aa19.51■□□□□ 0.71
TMCO1-206ENST00000481278 SHROOM2Q13796 1616 aa19.5■□□□□ 0.71
TMCO1-206ENST00000481278 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
TMCO1-206ENST00000481278 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
TMCO1-206ENST00000481278 KIF13AQ9H1H9 1805 aa19.38■□□□□ 0.69
TMCO1-206ENST00000481278 BIVM-ERCC5R4GMW8 1640 aa19.36■□□□□ 0.69
TMCO1-206ENST00000481278 TOP2BQ02880 1626 aa19.36■□□□□ 0.69
TMCO1-206ENST00000481278 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
TMCO1-206ENST00000481278 PRG4Q92954 1404 aaPredicted RBP19.3■□□□□ 0.68
TMCO1-206ENST00000481278 ABCC10Q5T3U5 1492 aa19.27■□□□□ 0.67
TMCO1-206ENST00000481278 RUSC2Q8N2Y8 1516 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms