RNA–Protein interactions for RNA: ENST00000481227.6

PDE4DIP-215, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-215ENST00000481227 NISCHQ9Y2I1 1504 aa22.54■■□□□ 1.2
PDE4DIP-215ENST00000481227 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
PDE4DIP-215ENST00000481227 ABCC9O60706 1549 aa19.71■□□□□ 0.75
PDE4DIP-215ENST00000481227 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
PDE4DIP-215ENST00000481227 NACADO15069 1562 aa18.89■□□□□ 0.62
PDE4DIP-215ENST00000481227 DCAF8L2P0C7V8 631 aa18.83■□□□□ 0.6
PDE4DIP-215ENST00000481227 MYO15BQ96JP2 1530 aa18.79■□□□□ 0.6
PDE4DIP-215ENST00000481227 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.59
PDE4DIP-215ENST00000481227 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
PDE4DIP-215ENST00000481227 UNC13AQ9UPW8 1703 aa18.45■□□□□ 0.54
PDE4DIP-215ENST00000481227 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDE4DIP-215ENST00000481227 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
PDE4DIP-215ENST00000481227 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
PDE4DIP-215ENST00000481227 SHROOM4Q9ULL8 1493 aa18.19■□□□□ 0.5
PDE4DIP-215ENST00000481227 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
PDE4DIP-215ENST00000481227 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
PDE4DIP-215ENST00000481227 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
PDE4DIP-215ENST00000481227 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
PDE4DIP-215ENST00000481227 SMARCA4P51532 1647 aa17.49■□□□□ 0.39
PDE4DIP-215ENST00000481227 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
PDE4DIP-215ENST00000481227 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
PDE4DIP-215ENST00000481227 ATAD2BQ9ULI0 1458 aa17.44■□□□□ 0.38
PDE4DIP-215ENST00000481227 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
PDE4DIP-215ENST00000481227 MROH2BQ7Z745 1585 aa17.36■□□□□ 0.37
PDE4DIP-215ENST00000481227 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
PDE4DIP-215ENST00000481227 PEG3Q9GZU2 1588 aa17.35■□□□□ 0.37
PDE4DIP-215ENST00000481227 BAZ1BQ9UIG0 1483 aaKnown RBP17.28■□□□□ 0.36
PDE4DIP-215ENST00000481227 RSF1Q96T23 1441 aaPredicted RBP17.15■□□□□ 0.34
PDE4DIP-215ENST00000481227 WIZO95785 1651 aa17.14■□□□□ 0.33
PDE4DIP-215ENST00000481227 NESP48681 1621 aa17.03■□□□□ 0.32
PDE4DIP-215ENST00000481227 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
PDE4DIP-215ENST00000481227 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
PDE4DIP-215ENST00000481227 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
PDE4DIP-215ENST00000481227 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
PDE4DIP-215ENST00000481227 PDS5BQ9NTI5 1447 aa16.87■□□□□ 0.29
PDE4DIP-215ENST00000481227 CUX2O14529 1486 aa16.86■□□□□ 0.29
PDE4DIP-215ENST00000481227 CFTRP13569 1480 aa16.81■□□□□ 0.28
PDE4DIP-215ENST00000481227 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
PDE4DIP-215ENST00000481227 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
PDE4DIP-215ENST00000481227 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
PDE4DIP-215ENST00000481227 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
PDE4DIP-215ENST00000481227 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
PDE4DIP-215ENST00000481227 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
PDE4DIP-215ENST00000481227 WDR62O43379 1518 aa16.65■□□□□ 0.26
PDE4DIP-215ENST00000481227 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
PDE4DIP-215ENST00000481227 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
PDE4DIP-215ENST00000481227 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
PDE4DIP-215ENST00000481227 TOPBP1Q92547 1522 aa16.45■□□□□ 0.22
PDE4DIP-215ENST00000481227 DNAJC5Q9H3Z4 198 aa16.45■□□□□ 0.22
PDE4DIP-215ENST00000481227 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
PDE4DIP-215ENST00000481227 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
PDE4DIP-215ENST00000481227 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
PDE4DIP-215ENST00000481227 POLA1P09884 1462 aaPredicted RBP16.31■□□□□ 0.2
PDE4DIP-215ENST00000481227 ZNF608Q9ULD9 1512 aaPredicted RBP16.3■□□□□ 0.2
PDE4DIP-215ENST00000481227 CUX1P39880 1505 aa16.29■□□□□ 0.2
PDE4DIP-215ENST00000481227 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.19
PDE4DIP-215ENST00000481227 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
PDE4DIP-215ENST00000481227 SOGA1O94964 1423 aa16.24■□□□□ 0.19
PDE4DIP-215ENST00000481227 RAD54L2Q9Y4B4 1467 aa16.23■□□□□ 0.19
PDE4DIP-215ENST00000481227 EIF4G3O43432 1585 aaKnown RBP16.21■□□□□ 0.19
PDE4DIP-215ENST00000481227 AQRO60306 1485 aaKnown RBP eCLIP16.19■□□□□ 0.18
PDE4DIP-215ENST00000481227 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
PDE4DIP-215ENST00000481227 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
PDE4DIP-215ENST00000481227 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
PDE4DIP-215ENST00000481227 OSCARQ8IYS5 282 aa16.14■□□□□ 0.17
PDE4DIP-215ENST00000481227 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
PDE4DIP-215ENST00000481227 SYNJ1O43426 1573 aa16.12■□□□□ 0.17
PDE4DIP-215ENST00000481227 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
PDE4DIP-215ENST00000481227 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
PDE4DIP-215ENST00000481227 GRIN2BQ13224 1484 aa16.06■□□□□ 0.16
PDE4DIP-215ENST00000481227 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
PDE4DIP-215ENST00000481227 SNAPC4Q5SXM2 1469 aa16.04■□□□□ 0.16
PDE4DIP-215ENST00000481227 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
PDE4DIP-215ENST00000481227 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
PDE4DIP-215ENST00000481227 CHD1O14646 1710 aa16■□□□□ 0.15
PDE4DIP-215ENST00000481227 FBLN2P98095 1184 aa16■□□□□ 0.15
PDE4DIP-215ENST00000481227 PBRM1Q86U86 1689 aa15.98■□□□□ 0.15
PDE4DIP-215ENST00000481227 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
PDE4DIP-215ENST00000481227 CHMP7Q8WUX9 453 aaPredicted RBP15.96■□□□□ 0.15
PDE4DIP-215ENST00000481227 ERICH3Q5RHP9 1530 aa15.9■□□□□ 0.14
PDE4DIP-215ENST00000481227 ADAMTS12P58397 1594 aa15.88■□□□□ 0.13
PDE4DIP-215ENST00000481227 ARHGEF11O15085 1522 aa15.88■□□□□ 0.13
PDE4DIP-215ENST00000481227 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
PDE4DIP-215ENST00000481227 CLASP1Q7Z460 1538 aa15.87■□□□□ 0.13
PDE4DIP-215ENST00000481227 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
PDE4DIP-215ENST00000481227 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
PDE4DIP-215ENST00000481227 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
PDE4DIP-215ENST00000481227 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
PDE4DIP-215ENST00000481227 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
PDE4DIP-215ENST00000481227 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
PDE4DIP-215ENST00000481227 NUP160Q12769 1436 aa15.8■□□□□ 0.12
PDE4DIP-215ENST00000481227 IGF1RP08069 1367 aa15.79■□□□□ 0.12
PDE4DIP-215ENST00000481227 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
PDE4DIP-215ENST00000481227 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
PDE4DIP-215ENST00000481227 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
PDE4DIP-215ENST00000481227 CUL7Q14999 1698 aa15.72■□□□□ 0.11
PDE4DIP-215ENST00000481227 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
PDE4DIP-215ENST00000481227 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
PDE4DIP-215ENST00000481227 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
PDE4DIP-215ENST00000481227 ERCC6L2Q5T890 1561 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms