RNA–Protein interactions for RNA: ENST00000481167.5

CHL1-213, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 662 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-213ENST00000481167 NISCHQ9Y2I1 1504 aa49.55■■■■■ 5.52
CHL1-213ENST00000481167 CCDC180Q9P1Z9 1646 aa43.87■■■■■ 4.61
CHL1-213ENST00000481167 ABCC9O60706 1549 aa43.07■■■■■ 4.48
CHL1-213ENST00000481167 DCAF8L2P0C7V8 631 aa41.5■■■■■ 4.23
CHL1-213ENST00000481167 ZCCHC6Q5VYS8 1495 aaKnown RBP41.34■■■■■ 4.21
CHL1-213ENST00000481167 NACADO15069 1562 aa41.18■■■■■ 4.18
CHL1-213ENST00000481167 RB1CC1Q8TDY2 1594 aa41.18■■■■■ 4.18
CHL1-213ENST00000481167 MYO15BQ96JP2 1530 aa40.96■■■■■ 4.15
CHL1-213ENST00000481167 DCAF1Q9Y4B6 1507 aa40.93■■■■■ 4.14
CHL1-213ENST00000481167 DNAJC5BQ9UF47 199 aa40.8■■■■■ 4.12
CHL1-213ENST00000481167 UNC13AQ9UPW8 1703 aa40.25■■■■■ 4.03
CHL1-213ENST00000481167 SCRIBQ14160 1630 aa40.18■■■■■ 4.02
CHL1-213ENST00000481167 PABPN1Q86U42 306 aaKnown RBP eCLIP40.05■■■■■ 4
CHL1-213ENST00000481167 BICRAQ9NZM4 1560 aa39.9■■■■□ 3.98
CHL1-213ENST00000481167 SHROOM4Q9ULL8 1493 aa39.54■■■■□ 3.92
CHL1-213ENST00000481167 CC2D2AQ9P2K1 1620 aa38.87■■■■□ 3.81
CHL1-213ENST00000481167 EIF4G1Q04637 1599 aaKnown RBP38.84■■■■□ 3.81
CHL1-213ENST00000481167 CECR2Q9BXF3 1484 aa38.82■■■■□ 3.81
CHL1-213ENST00000481167 SMARCA4P51532 1647 aa38.4■■■■□ 3.74
CHL1-213ENST00000481167 BAZ1AQ9NRL2 1556 aaPredicted RBP38.39■■■■□ 3.74
CHL1-213ENST00000481167 MROH2BQ7Z745 1585 aa38.23■■■■□ 3.71
CHL1-213ENST00000481167 ATAD2BQ9ULI0 1458 aa38.09■■■■□ 3.69
CHL1-213ENST00000481167 SMARCA2P51531 1590 aa38.06■■■■□ 3.68
CHL1-213ENST00000481167 NCAPD3P42695 1498 aa37.99■■■■□ 3.67
CHL1-213ENST00000481167 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
CHL1-213ENST00000481167 RSF1Q96T23 1441 aaPredicted RBP37.9■■■■□ 3.66
CHL1-213ENST00000481167 WIZO95785 1651 aa37.87■■■■□ 3.65
CHL1-213ENST00000481167 BAZ1BQ9UIG0 1483 aaKnown RBP37.84■■■■□ 3.65
CHL1-213ENST00000481167 HMGXB3Q12766 1538 aa37.83■■■■□ 3.65
CHL1-213ENST00000481167 DNAJC5Q9H3Z4 198 aa37.76■■■■□ 3.64
CHL1-213ENST00000481167 TOP2AP11388 1531 aaKnown RBP37.44■■■■□ 3.58
CHL1-213ENST00000481167 SUPT5HO00267 1087 aaKnown RBP37.37■■■■□ 3.57
CHL1-213ENST00000481167 CUX2O14529 1486 aa37.26■■■■□ 3.55
CHL1-213ENST00000481167 ERCC6Q03468 1493 aa37.2■■■■□ 3.55
CHL1-213ENST00000481167 NESP48681 1621 aa37.07■■■■□ 3.53
CHL1-213ENST00000481167 CCDC88BA6NC98 1476 aa37.02■■■■□ 3.52
CHL1-213ENST00000481167 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
CHL1-213ENST00000481167 CADPSQ9ULU8 1353 aa36.94■■■■□ 3.5
CHL1-213ENST00000481167 CFTRP13569 1480 aa36.76■■■■□ 3.48
CHL1-213ENST00000481167 PDS5BQ9NTI5 1447 aa36.72■■■■□ 3.47
CHL1-213ENST00000481167 KIF21AQ7Z4S6 1674 aa36.63■■■■□ 3.45
CHL1-213ENST00000481167 THOC2Q8NI27 1593 aaKnown RBP36.59■■■■□ 3.45
CHL1-213ENST00000481167 FANCD2Q9BXW9 1451 aa36.55■■■■□ 3.44
CHL1-213ENST00000481167 PRDM2Q13029 1718 aa36.52■■■■□ 3.44
CHL1-213ENST00000481167 CEP164Q9UPV0 1460 aa36.47■■■■□ 3.43
CHL1-213ENST00000481167 MRC2Q9UBG0 1479 aa36.34■■■■□ 3.41
CHL1-213ENST00000481167 WDR62O43379 1518 aa36.17■■■■□ 3.38
CHL1-213ENST00000481167 URB2Q14146 1524 aaKnown RBP36.15■■■■□ 3.38
CHL1-213ENST00000481167 TOPBP1Q92547 1522 aa35.99■■■■□ 3.35
CHL1-213ENST00000481167 TRIM41Q8WV44 630 aa35.98■■■■□ 3.35
CHL1-213ENST00000481167 ABCC8Q09428 1581 aa35.97■■■■□ 3.35
CHL1-213ENST00000481167 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
CHL1-213ENST00000481167 CUX1P39880 1505 aa35.84■■■■□ 3.33
CHL1-213ENST00000481167 WRNQ14191 1432 aaPredicted RBP eCLIP35.76■■■■□ 3.32
CHL1-213ENST00000481167 POLA1P09884 1462 aaPredicted RBP35.7■■■■□ 3.31
CHL1-213ENST00000481167 FGD5Q6ZNL6 1462 aa35.69■■■■□ 3.3
CHL1-213ENST00000481167 IFT140Q96RY7 1462 aa35.67■■■■□ 3.3
CHL1-213ENST00000481167 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
CHL1-213ENST00000481167 SOGA1O94964 1423 aa35.6■■■■□ 3.29
CHL1-213ENST00000481167 TOP2BQ02880 1626 aa35.6■■■■□ 3.29
CHL1-213ENST00000481167 RAD54L2Q9Y4B4 1467 aa35.6■■■■□ 3.29
CHL1-213ENST00000481167 BIVM-ERCC5R4GMW8 1640 aa35.59■■■■□ 3.29
CHL1-213ENST00000481167 TARBP1Q13395 1621 aaKnown RBP35.54■■■■□ 3.28
CHL1-213ENST00000481167 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
CHL1-213ENST00000481167 OSCARQ8IYS5 282 aa35.45■■■■□ 3.27
CHL1-213ENST00000481167 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.26
CHL1-213ENST00000481167 AQRO60306 1485 aaKnown RBP eCLIP35.38■■■■□ 3.25
CHL1-213ENST00000481167 EIF4G3O43432 1585 aaKnown RBP35.37■■■■□ 3.25
CHL1-213ENST00000481167 WDR97A6NE52 1622 aa35.32■■■■□ 3.25
CHL1-213ENST00000481167 ABCA10Q8WWZ4 1543 aa35.31■■■■□ 3.24
CHL1-213ENST00000481167 GAPVD1Q14C86 1478 aa35.18■■■■□ 3.22
CHL1-213ENST00000481167 ABCA5Q8WWZ7 1642 aa35.14■■■■□ 3.22
CHL1-213ENST00000481167 RIMBP3CA6NJZ7 1639 aa35.13■■■■□ 3.21
CHL1-213ENST00000481167 RIMBP3BA6NNM3 1639 aa35.13■■■■□ 3.21
CHL1-213ENST00000481167 RIMBP3Q9UFD9 1639 aa35.13■■■■□ 3.21
CHL1-213ENST00000481167 GRIN2BQ13224 1484 aa35.11■■■■□ 3.21
CHL1-213ENST00000481167 PBRM1Q86U86 1689 aa35.08■■■■□ 3.21
CHL1-213ENST00000481167 SNAPC4Q5SXM2 1469 aa35.05■■■■□ 3.2
CHL1-213ENST00000481167 FBLN2P98095 1184 aa34.99■■■■□ 3.19
CHL1-213ENST00000481167 CHIC1Q5VXU3 224 aa34.99■■■■□ 3.19
CHL1-213ENST00000481167 KIF27Q86VH2 1401 aa34.98■■■■□ 3.19
CHL1-213ENST00000481167 MAGI1Q96QZ7 1491 aaPredicted RBP34.96■■■■□ 3.19
CHL1-213ENST00000481167 ARHGEF11O15085 1522 aa34.95■■■■□ 3.19
CHL1-213ENST00000481167 ERICH3Q5RHP9 1530 aa34.89■■■■□ 3.18
CHL1-213ENST00000481167 CHD1O14646 1710 aa34.89■■■■□ 3.18
CHL1-213ENST00000481167 CHMP7Q8WUX9 453 aaPredicted RBP34.88■■■■□ 3.17
CHL1-213ENST00000481167 SYNJ2O15056 1496 aa34.84■■■■□ 3.17
CHL1-213ENST00000481167 RUSC2Q8N2Y8 1516 aa34.81■■■■□ 3.16
CHL1-213ENST00000481167 ADAMTS12P58397 1594 aa34.8■■■■□ 3.16
CHL1-213ENST00000481167 IGF1RP08069 1367 aa34.78■■■■□ 3.16
CHL1-213ENST00000481167 FHAD1B1AJZ9 1412 aa34.77■■■■□ 3.16
CHL1-213ENST00000481167 CYB5RLQ6IPT4 315 aa34.7■■■■□ 3.15
CHL1-213ENST00000481167 GRIN2AQ12879 1464 aa34.66■■■■□ 3.14
CHL1-213ENST00000481167 CUL7Q14999 1698 aa34.65■■■■□ 3.14
CHL1-213ENST00000481167 CARMIL1Q5VZK9 1371 aa34.62■■■■□ 3.13
CHL1-213ENST00000481167 ARAP1Q96P48 1450 aa34.58■■■■□ 3.13
CHL1-213ENST00000481167 FAM9AQ8IZU1 332 aaPredicted RBP34.58■■■■□ 3.13
CHL1-213ENST00000481167 EEA1Q15075 1411 aa34.49■■■■□ 3.11
CHL1-213ENST00000481167 TRHP20396 242 aaPredicted RBP34.48■■■■□ 3.11
CHL1-213ENST00000481167 CSRNP3Q8WYN3 585 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms