RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 NISCHQ9Y2I1 1504 aa16.09■□□□□ 0.17
PRDM1-206ENST00000481163 CCDC180Q9P1Z9 1646 aa14.31□□□□□ -0.12
PRDM1-206ENST00000481163 ABCC9O60706 1549 aa14.15□□□□□ -0.14
PRDM1-206ENST00000481163 AEBP2Q6ZN18 517 aaPredicted RBP13.81□□□□□ -0.2
PRDM1-206ENST00000481163 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
PRDM1-206ENST00000481163 RB1CC1Q8TDY2 1594 aa13.51□□□□□ -0.25
PRDM1-206ENST00000481163 NACADO15069 1562 aa13.45□□□□□ -0.26
PRDM1-206ENST00000481163 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
PRDM1-206ENST00000481163 ZCCHC6Q5VYS8 1495 aaKnown RBP13.36□□□□□ -0.27
PRDM1-206ENST00000481163 UNC13AQ9UPW8 1703 aa13.3□□□□□ -0.28
PRDM1-206ENST00000481163 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRDM1-206ENST00000481163 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
PRDM1-206ENST00000481163 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
PRDM1-206ENST00000481163 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
PRDM1-206ENST00000481163 CHIC1Q5VXU3 224 aa13.1□□□□□ -0.31
PRDM1-206ENST00000481163 BICRAQ9NZM4 1560 aa13.1□□□□□ -0.31
PRDM1-206ENST00000481163 DNAJC5BQ9UF47 199 aa13.01□□□□□ -0.33
PRDM1-206ENST00000481163 SHROOM4Q9ULL8 1493 aa12.9□□□□□ -0.34
PRDM1-206ENST00000481163 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.37
PRDM1-206ENST00000481163 CC2D2AQ9P2K1 1620 aa12.76□□□□□ -0.37
PRDM1-206ENST00000481163 CECR2Q9BXF3 1484 aa12.66□□□□□ -0.38
PRDM1-206ENST00000481163 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
PRDM1-206ENST00000481163 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
PRDM1-206ENST00000481163 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
PRDM1-206ENST00000481163 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
PRDM1-206ENST00000481163 SMARCA2P51531 1590 aa12.42□□□□□ -0.42
PRDM1-206ENST00000481163 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
PRDM1-206ENST00000481163 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
PRDM1-206ENST00000481163 WIZO95785 1651 aa12.37□□□□□ -0.43
PRDM1-206ENST00000481163 HMGXB3Q12766 1538 aa12.33□□□□□ -0.44
PRDM1-206ENST00000481163 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
PRDM1-206ENST00000481163 RSF1Q96T23 1441 aaPredicted RBP12.27□□□□□ -0.45
PRDM1-206ENST00000481163 NESP48681 1621 aa12.23□□□□□ -0.45
PRDM1-206ENST00000481163 ERCC6Q03468 1493 aa12.2□□□□□ -0.46
PRDM1-206ENST00000481163 SENP3Q9H4L4 574 aaPredicted RBP12.19□□□□□ -0.46
PRDM1-206ENST00000481163 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
PRDM1-206ENST00000481163 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
PRDM1-206ENST00000481163 LAMC3Q9Y6N6 1575 aa12.11□□□□□ -0.47
PRDM1-206ENST00000481163 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
PRDM1-206ENST00000481163 CADPSQ9ULU8 1353 aa12.07□□□□□ -0.48
PRDM1-206ENST00000481163 PDS5BQ9NTI5 1447 aa12.04□□□□□ -0.48
PRDM1-206ENST00000481163 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
PRDM1-206ENST00000481163 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
PRDM1-206ENST00000481163 CFTRP13569 1480 aa11.97□□□□□ -0.49
PRDM1-206ENST00000481163 PRDM2Q13029 1718 aa11.97□□□□□ -0.49
PRDM1-206ENST00000481163 CUX2O14529 1486 aa11.96□□□□□ -0.49
PRDM1-206ENST00000481163 FANCD2Q9BXW9 1451 aa11.96□□□□□ -0.49
PRDM1-206ENST00000481163 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
PRDM1-206ENST00000481163 MRC2Q9UBG0 1479 aa11.92□□□□□ -0.5
PRDM1-206ENST00000481163 WDR62O43379 1518 aa11.85□□□□□ -0.51
PRDM1-206ENST00000481163 URB2Q14146 1524 aaKnown RBP11.84□□□□□ -0.51
PRDM1-206ENST00000481163 TOPBP1Q92547 1522 aa11.76□□□□□ -0.53
PRDM1-206ENST00000481163 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
PRDM1-206ENST00000481163 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
PRDM1-206ENST00000481163 ABCC8Q09428 1581 aa11.72□□□□□ -0.53
PRDM1-206ENST00000481163 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
PRDM1-206ENST00000481163 CUX1P39880 1505 aa11.67□□□□□ -0.54
PRDM1-206ENST00000481163 ZNF608Q9ULD9 1512 aaPredicted RBP11.67□□□□□ -0.54
PRDM1-206ENST00000481163 IFT140Q96RY7 1462 aa11.67□□□□□ -0.54
PRDM1-206ENST00000481163 RAD54L2Q9Y4B4 1467 aa11.67□□□□□ -0.54
PRDM1-206ENST00000481163 POLA1P09884 1462 aaPredicted RBP11.65□□□□□ -0.54
PRDM1-206ENST00000481163 SOGA1O94964 1423 aa11.65□□□□□ -0.54
PRDM1-206ENST00000481163 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
PRDM1-206ENST00000481163 TARBP1Q13395 1621 aaKnown RBP11.63□□□□□ -0.55
PRDM1-206ENST00000481163 AQRO60306 1485 aaKnown RBP eCLIP11.63□□□□□ -0.55
PRDM1-206ENST00000481163 TDRD9Q8NDG6 1382 aaKnown RBP11.62□□□□□ -0.55
PRDM1-206ENST00000481163 EIF4G3O43432 1585 aaKnown RBP11.62□□□□□ -0.55
PRDM1-206ENST00000481163 FBLN2P98095 1184 aa11.6□□□□□ -0.55
PRDM1-206ENST00000481163 WRNQ14191 1432 aaPredicted RBP eCLIP11.59□□□□□ -0.55
PRDM1-206ENST00000481163 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
PRDM1-206ENST00000481163 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
PRDM1-206ENST00000481163 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
PRDM1-206ENST00000481163 BIVM-ERCC5R4GMW8 1640 aa11.55□□□□□ -0.56
PRDM1-206ENST00000481163 CHD1O14646 1710 aa11.55□□□□□ -0.56
PRDM1-206ENST00000481163 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
PRDM1-206ENST00000481163 PBRM1Q86U86 1689 aa11.52□□□□□ -0.56
PRDM1-206ENST00000481163 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
PRDM1-206ENST00000481163 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
PRDM1-206ENST00000481163 SNAPC4Q5SXM2 1469 aa11.49□□□□□ -0.57
PRDM1-206ENST00000481163 ABCA10Q8WWZ4 1543 aa11.48□□□□□ -0.57
PRDM1-206ENST00000481163 GRIN2BQ13224 1484 aa11.47□□□□□ -0.57
PRDM1-206ENST00000481163 TRIM41Q8WV44 630 aa11.45□□□□□ -0.58
PRDM1-206ENST00000481163 ABCA5Q8WWZ7 1642 aa11.45□□□□□ -0.58
PRDM1-206ENST00000481163 FOXD1Q16676 465 aa11.42□□□□□ -0.58
PRDM1-206ENST00000481163 MAGI1Q96QZ7 1491 aaPredicted RBP11.42□□□□□ -0.58
PRDM1-206ENST00000481163 SYNJ2O15056 1496 aa11.39□□□□□ -0.59
PRDM1-206ENST00000481163 MSH5O43196 834 aa11.39□□□□□ -0.59
PRDM1-206ENST00000481163 RIMBP3CA6NJZ7 1639 aa11.38□□□□□ -0.59
PRDM1-206ENST00000481163 RIMBP3BA6NNM3 1639 aa11.38□□□□□ -0.59
PRDM1-206ENST00000481163 RIMBP3Q9UFD9 1639 aa11.38□□□□□ -0.59
PRDM1-206ENST00000481163 ADAMTS12P58397 1594 aa11.35□□□□□ -0.59
PRDM1-206ENST00000481163 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
PRDM1-206ENST00000481163 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
PRDM1-206ENST00000481163 CYB5RLQ6IPT4 315 aa11.33□□□□□ -0.6
PRDM1-206ENST00000481163 ARHGEF11O15085 1522 aa11.33□□□□□ -0.6
PRDM1-206ENST00000481163 FHAD1B1AJZ9 1412 aa11.33□□□□□ -0.6
PRDM1-206ENST00000481163 GRIN2AQ12879 1464 aa11.32□□□□□ -0.6
PRDM1-206ENST00000481163 RUSC2Q8N2Y8 1516 aa11.3□□□□□ -0.6
PRDM1-206ENST00000481163 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
PRDM1-206ENST00000481163 IGF1RP08069 1367 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms