RNA–Protein interactions for RNA: ENST00000481062.1

DKC1-210, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-210ENST00000481062 NISCHQ9Y2I1 1504 aa33.52■■■□□ 2.96
DKC1-210ENST00000481062 ABCC9O60706 1549 aa30.88■■■□□ 2.53
DKC1-210ENST00000481062 CCDC180Q9P1Z9 1646 aa30.33■■■□□ 2.45
DKC1-210ENST00000481062 DNAJC5BQ9UF47 199 aa29.48■■■□□ 2.31
DKC1-210ENST00000481062 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
DKC1-210ENST00000481062 NACADO15069 1562 aa28.86■■■□□ 2.21
DKC1-210ENST00000481062 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
DKC1-210ENST00000481062 DCAF8L2P0C7V8 631 aa28.59■■■□□ 2.17
DKC1-210ENST00000481062 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
DKC1-210ENST00000481062 MYO15BQ96JP2 1530 aa28.29■■■□□ 2.12
DKC1-210ENST00000481062 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
DKC1-210ENST00000481062 SHROOM4Q9ULL8 1493 aa27.97■■■□□ 2.07
DKC1-210ENST00000481062 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
DKC1-210ENST00000481062 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
DKC1-210ENST00000481062 DCAF1Q9Y4B6 1507 aa27.69■■■□□ 2.02
DKC1-210ENST00000481062 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
DKC1-210ENST00000481062 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.01
DKC1-210ENST00000481062 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
DKC1-210ENST00000481062 SCRIBQ14160 1630 aa27.53■■■□□ 2
DKC1-210ENST00000481062 CUX2O14529 1486 aa26.93■■□□□ 1.9
DKC1-210ENST00000481062 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
DKC1-210ENST00000481062 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
DKC1-210ENST00000481062 ATAD2BQ9ULI0 1458 aa26.46■■□□□ 1.83
DKC1-210ENST00000481062 HMGXB3Q12766 1538 aa26.38■■□□□ 1.81
DKC1-210ENST00000481062 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
DKC1-210ENST00000481062 NESP48681 1621 aa26.32■■□□□ 1.8
DKC1-210ENST00000481062 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
DKC1-210ENST00000481062 THOC2Q8NI27 1593 aaKnown RBP26.18■■□□□ 1.78
DKC1-210ENST00000481062 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
DKC1-210ENST00000481062 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
DKC1-210ENST00000481062 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
DKC1-210ENST00000481062 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
DKC1-210ENST00000481062 PDS5BQ9NTI5 1447 aa26.05■■□□□ 1.76
DKC1-210ENST00000481062 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
DKC1-210ENST00000481062 KIF21AQ7Z4S6 1674 aa25.94■■□□□ 1.74
DKC1-210ENST00000481062 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
DKC1-210ENST00000481062 MRC2Q9UBG0 1479 aa25.8■■□□□ 1.72
DKC1-210ENST00000481062 MROH2BQ7Z745 1585 aa25.78■■□□□ 1.72
DKC1-210ENST00000481062 WDR62O43379 1518 aa25.74■■□□□ 1.71
DKC1-210ENST00000481062 OSCARQ8IYS5 282 aa25.65■■□□□ 1.7
DKC1-210ENST00000481062 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
DKC1-210ENST00000481062 FANCD2Q9BXW9 1451 aa25.5■■□□□ 1.67
DKC1-210ENST00000481062 WIZO95785 1651 aa25.42■■□□□ 1.66
DKC1-210ENST00000481062 CFTRP13569 1480 aa25.38■■□□□ 1.65
DKC1-210ENST00000481062 URB2Q14146 1524 aaKnown RBP25.28■■□□□ 1.64
DKC1-210ENST00000481062 RIMBP3CA6NJZ7 1639 aa25.25■■□□□ 1.63
DKC1-210ENST00000481062 RIMBP3BA6NNM3 1639 aa25.25■■□□□ 1.63
DKC1-210ENST00000481062 RIMBP3Q9UFD9 1639 aa25.25■■□□□ 1.63
DKC1-210ENST00000481062 ARHGEF11O15085 1522 aa25.14■■□□□ 1.62
DKC1-210ENST00000481062 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
DKC1-210ENST00000481062 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
DKC1-210ENST00000481062 RSF1Q96T23 1441 aaPredicted RBP25.06■■□□□ 1.6
DKC1-210ENST00000481062 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
DKC1-210ENST00000481062 CYB5RLQ6IPT4 315 aa25.05■■□□□ 1.6
DKC1-210ENST00000481062 PRDM2Q13029 1718 aa24.99■■□□□ 1.59
DKC1-210ENST00000481062 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
DKC1-210ENST00000481062 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
DKC1-210ENST00000481062 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
DKC1-210ENST00000481062 EIF4G3O43432 1585 aaKnown RBP24.88■■□□□ 1.57
DKC1-210ENST00000481062 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
DKC1-210ENST00000481062 ARAP1Q96P48 1450 aa24.83■■□□□ 1.57
DKC1-210ENST00000481062 FBLN2P98095 1184 aa24.8■■□□□ 1.56
DKC1-210ENST00000481062 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.562e-18■■■■■ 37.1
DKC1-210ENST00000481062 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
DKC1-210ENST00000481062 CHD1O14646 1710 aa24.78■■□□□ 1.56
DKC1-210ENST00000481062 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
DKC1-210ENST00000481062 TARBP1Q13395 1621 aaKnown RBP24.72■■□□□ 1.55
DKC1-210ENST00000481062 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
DKC1-210ENST00000481062 SOGA1O94964 1423 aa24.56■■□□□ 1.52
DKC1-210ENST00000481062 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
DKC1-210ENST00000481062 CHMP7Q8WUX9 453 aaPredicted RBP24.55■■□□□ 1.52
DKC1-210ENST00000481062 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
DKC1-210ENST00000481062 CLASP1Q7Z460 1538 aa24.53■■□□□ 1.52
DKC1-210ENST00000481062 SNAPC4Q5SXM2 1469 aa24.51■■□□□ 1.51
DKC1-210ENST00000481062 SYNJ1O43426 1573 aa24.51■■□□□ 1.51
DKC1-210ENST00000481062 WDR97A6NE52 1622 aa24.51■■□□□ 1.51
DKC1-210ENST00000481062 MAGI1Q96QZ7 1491 aaPredicted RBP24.47■■□□□ 1.51
DKC1-210ENST00000481062 GRIN2BQ13224 1484 aa24.41■■□□□ 1.5
DKC1-210ENST00000481062 SYNJ2O15056 1496 aa24.39■■□□□ 1.5
DKC1-210ENST00000481062 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
DKC1-210ENST00000481062 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
DKC1-210ENST00000481062 CUX1P39880 1505 aa24.25■■□□□ 1.47
DKC1-210ENST00000481062 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
DKC1-210ENST00000481062 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
DKC1-210ENST00000481062 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
DKC1-210ENST00000481062 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
DKC1-210ENST00000481062 ERCC6L2Q5T890 1561 aa24.05■■□□□ 1.44
DKC1-210ENST00000481062 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
DKC1-210ENST00000481062 NUP160Q12769 1436 aa24.02■■□□□ 1.44
DKC1-210ENST00000481062 SHROOM2Q13796 1616 aa23.94■■□□□ 1.42
DKC1-210ENST00000481062 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
DKC1-210ENST00000481062 WRNQ14191 1432 aaPredicted RBP eCLIP23.93■■□□□ 1.42
DKC1-210ENST00000481062 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
DKC1-210ENST00000481062 KIF13AQ9H1H9 1805 aa23.9■■□□□ 1.42
DKC1-210ENST00000481062 NPM1P06748 294 aaKnown RBP eCLIP23.85■■□□□ 1.41
DKC1-210ENST00000481062 PRG4Q92954 1404 aaPredicted RBP23.84■■□□□ 1.41
DKC1-210ENST00000481062 FAM69CQ0P6D2 419 aa23.84■■□□□ 1.41
DKC1-210ENST00000481062 JPH4Q96JJ6 628 aa23.83■■□□□ 1.41
DKC1-210ENST00000481062 ABCC10Q5T3U5 1492 aa23.81■■□□□ 1.4
DKC1-210ENST00000481062 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms