RNA–Protein interactions for RNA: ENST00000481009.1

S100A4-206, Transcript of S100 calcium binding protein A4, humanhuman

TSL 1 (best)

Gene S100A4, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
S100A4-206ENST00000481009 NISCHQ9Y2I1 1504 aa28.79■■■□□ 2.2
S100A4-206ENST00000481009 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
S100A4-206ENST00000481009 ABCC9O60706 1549 aa24.92■■□□□ 1.58
S100A4-206ENST00000481009 NACADO15069 1562 aa24.05■■□□□ 1.44
S100A4-206ENST00000481009 RB1CC1Q8TDY2 1594 aa24.03■■□□□ 1.44
S100A4-206ENST00000481009 MYO15BQ96JP2 1530 aa23.98■■□□□ 1.43
S100A4-206ENST00000481009 ZCCHC6Q5VYS8 1495 aaKnown RBP23.97■■□□□ 1.43
S100A4-206ENST00000481009 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
S100A4-206ENST00000481009 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
S100A4-206ENST00000481009 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
S100A4-206ENST00000481009 UNC13AQ9UPW8 1703 aa23.46■■□□□ 1.35
S100A4-206ENST00000481009 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
S100A4-206ENST00000481009 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
S100A4-206ENST00000481009 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
S100A4-206ENST00000481009 SHROOM4Q9ULL8 1493 aa23.12■■□□□ 1.29
S100A4-206ENST00000481009 DNAJC5Q9H3Z4 198 aa22.73■■□□□ 1.23
S100A4-206ENST00000481009 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
S100A4-206ENST00000481009 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
S100A4-206ENST00000481009 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
S100A4-206ENST00000481009 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
S100A4-206ENST00000481009 SMARCA4P51532 1647 aa22.29■■□□□ 1.16
S100A4-206ENST00000481009 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
S100A4-206ENST00000481009 ATAD2BQ9ULI0 1458 aa22.2■■□□□ 1.14
S100A4-206ENST00000481009 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
S100A4-206ENST00000481009 MROH2BQ7Z745 1585 aa22.16■■□□□ 1.14
S100A4-206ENST00000481009 PEG3Q9GZU2 1588 aa22.13■■□□□ 1.13
S100A4-206ENST00000481009 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
S100A4-206ENST00000481009 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
S100A4-206ENST00000481009 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
S100A4-206ENST00000481009 WIZO95785 1651 aa21.89■■□□□ 1.1
S100A4-206ENST00000481009 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
S100A4-206ENST00000481009 NESP48681 1621 aa21.58■■□□□ 1.05
S100A4-206ENST00000481009 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
S100A4-206ENST00000481009 CADPSQ9ULU8 1353 aa21.55■■□□□ 1.04
S100A4-206ENST00000481009 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
S100A4-206ENST00000481009 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
S100A4-206ENST00000481009 PDS5BQ9NTI5 1447 aa21.45■■□□□ 1.02
S100A4-206ENST00000481009 CFTRP13569 1480 aa21.43■■□□□ 1.02
S100A4-206ENST00000481009 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
S100A4-206ENST00000481009 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
S100A4-206ENST00000481009 CUX2O14529 1486 aa21.3■■□□□ 1
S100A4-206ENST00000481009 THOC2Q8NI27 1593 aaKnown RBP21.27■□□□□ 0.99
S100A4-206ENST00000481009 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
S100A4-206ENST00000481009 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
S100A4-206ENST00000481009 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
S100A4-206ENST00000481009 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
S100A4-206ENST00000481009 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
S100A4-206ENST00000481009 WDR62O43379 1518 aa21.14■□□□□ 0.97
S100A4-206ENST00000481009 URB2Q14146 1524 aaKnown RBP21.05■□□□□ 0.96
S100A4-206ENST00000481009 ABCC8Q09428 1581 aa20.98■□□□□ 0.95
S100A4-206ENST00000481009 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
S100A4-206ENST00000481009 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
S100A4-206ENST00000481009 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
S100A4-206ENST00000481009 CUX1P39880 1505 aa20.78■□□□□ 0.92
S100A4-206ENST00000481009 POLA1P09884 1462 aaPredicted RBP20.75■□□□□ 0.91
S100A4-206ENST00000481009 TARBP1Q13395 1621 aaKnown RBP20.71■□□□□ 0.91
S100A4-206ENST00000481009 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
S100A4-206ENST00000481009 SOGA1O94964 1423 aa20.69■□□□□ 0.9
S100A4-206ENST00000481009 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
S100A4-206ENST00000481009 WRNQ14191 1432 aaPredicted RBP eCLIP20.66■□□□□ 0.9
S100A4-206ENST00000481009 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
S100A4-206ENST00000481009 TOP2BQ02880 1626 aa20.62■□□□□ 0.89
S100A4-206ENST00000481009 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
S100A4-206ENST00000481009 SYNJ1O43426 1573 aa20.59■□□□□ 0.89
S100A4-206ENST00000481009 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.88
S100A4-206ENST00000481009 WDR97A6NE52 1622 aa20.57■□□□□ 0.88
S100A4-206ENST00000481009 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
S100A4-206ENST00000481009 ABCA10Q8WWZ4 1543 aa20.54■□□□□ 0.88
S100A4-206ENST00000481009 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
S100A4-206ENST00000481009 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
S100A4-206ENST00000481009 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
S100A4-206ENST00000481009 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
S100A4-206ENST00000481009 ABCA5Q8WWZ7 1642 aa20.42■□□□□ 0.86
S100A4-206ENST00000481009 MAGI1Q96QZ7 1491 aaPredicted RBP20.38■□□□□ 0.85
S100A4-206ENST00000481009 SNAPC4Q5SXM2 1469 aa20.37■□□□□ 0.85
S100A4-206ENST00000481009 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
S100A4-206ENST00000481009 CHD1O14646 1710 aa20.3■□□□□ 0.84
S100A4-206ENST00000481009 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
S100A4-206ENST00000481009 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
S100A4-206ENST00000481009 FBLN2P98095 1184 aa20.28■□□□□ 0.84
S100A4-206ENST00000481009 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
S100A4-206ENST00000481009 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
S100A4-206ENST00000481009 KIF27Q86VH2 1401 aa20.24■□□□□ 0.83
S100A4-206ENST00000481009 FHAD1B1AJZ9 1412 aa20.22■□□□□ 0.83
S100A4-206ENST00000481009 ADAMTS12P58397 1594 aa20.21■□□□□ 0.83
S100A4-206ENST00000481009 IGF1RP08069 1367 aa20.2■□□□□ 0.82
S100A4-206ENST00000481009 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
S100A4-206ENST00000481009 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
S100A4-206ENST00000481009 NUP160Q12769 1436 aa20.1■□□□□ 0.81
S100A4-206ENST00000481009 CUL7Q14999 1698 aa20.08■□□□□ 0.81
S100A4-206ENST00000481009 ARHGEF11O15085 1522 aa20.06■□□□□ 0.8
S100A4-206ENST00000481009 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
S100A4-206ENST00000481009 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
S100A4-206ENST00000481009 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
S100A4-206ENST00000481009 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
S100A4-206ENST00000481009 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
S100A4-206ENST00000481009 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
S100A4-206ENST00000481009 CHIC1Q5VXU3 224 aa20■□□□□ 0.79
S100A4-206ENST00000481009 SHROOM2Q13796 1616 aa19.93■□□□□ 0.78
S100A4-206ENST00000481009 RAPGEF2Q9Y4G8 1499 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 303.9 ms