RNA–Protein interactions for RNA: ENST00000480853.1

LSG1-208, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 539 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-208ENST00000480853 NISCHQ9Y2I1 1504 aa42.3■■■■■ 4.36
LSG1-208ENST00000480853 ABCC9O60706 1549 aa37.87■■■■□ 3.65
LSG1-208ENST00000480853 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
LSG1-208ENST00000480853 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
LSG1-208ENST00000480853 DCAF8L2P0C7V8 631 aa35.88■■■■□ 3.33
LSG1-208ENST00000480853 NACADO15069 1562 aa35.72■■■■□ 3.31
LSG1-208ENST00000480853 DNAJC5BQ9UF47 199 aa35.59■■■■□ 3.29
LSG1-208ENST00000480853 PABPN1Q86U42 306 aaKnown RBP eCLIP35.4■■■■□ 3.26
LSG1-208ENST00000480853 UNC13AQ9UPW8 1703 aa35.22■■■■□ 3.23
LSG1-208ENST00000480853 MYO15BQ96JP2 1530 aa35.2■■■■□ 3.23
LSG1-208ENST00000480853 ZCCHC6Q5VYS8 1495 aaKnown RBP35.03■■■■□ 3.2
LSG1-208ENST00000480853 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
LSG1-208ENST00000480853 DCAF1Q9Y4B6 1507 aa34.82■■■■□ 3.16
LSG1-208ENST00000480853 SCRIBQ14160 1630 aa34.57■■■■□ 3.12
LSG1-208ENST00000480853 SHROOM4Q9ULL8 1493 aa34.28■■■■□ 3.08
LSG1-208ENST00000480853 CC2D2AQ9P2K1 1620 aa34.15■■■■□ 3.06
LSG1-208ENST00000480853 EIF4G1Q04637 1599 aaKnown RBP34.07■■■■□ 3.05
LSG1-208ENST00000480853 CECR2Q9BXF3 1484 aa34.04■■■■□ 3.04
LSG1-208ENST00000480853 NCAPD3P42695 1498 aa33.04■■■□□ 2.88
LSG1-208ENST00000480853 ATAD2BQ9ULI0 1458 aa32.99■■■□□ 2.87
LSG1-208ENST00000480853 SMARCA4P51532 1647 aa32.95■■■□□ 2.86
LSG1-208ENST00000480853 SMARCA2P51531 1590 aa32.8■■■□□ 2.84
LSG1-208ENST00000480853 BAZ1AQ9NRL2 1556 aaPredicted RBP32.75■■■□□ 2.83
LSG1-208ENST00000480853 HMGXB3Q12766 1538 aa32.72■■■□□ 2.83
LSG1-208ENST00000480853 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
LSG1-208ENST00000480853 BAZ1BQ9UIG0 1483 aaKnown RBP32.63■■■□□ 2.81
LSG1-208ENST00000480853 NESP48681 1621 aa32.61■■■□□ 2.81
LSG1-208ENST00000480853 ERCC6Q03468 1493 aa32.6■■■□□ 2.81
LSG1-208ENST00000480853 PEG3Q9GZU2 1588 aa32.56■■■□□ 2.8
LSG1-208ENST00000480853 DNAJC5Q9H3Z4 198 aa32.45■■■□□ 2.79
LSG1-208ENST00000480853 CUX2O14529 1486 aa32.42■■■□□ 2.78
LSG1-208ENST00000480853 WIZO95785 1651 aa32.27■■■□□ 2.76
LSG1-208ENST00000480853 LAMC3Q9Y6N6 1575 aa32.2■■■□□ 2.75
LSG1-208ENST00000480853 THOC2Q8NI27 1593 aaKnown RBP32.1■■■□□ 2.73
LSG1-208ENST00000480853 KIF21AQ7Z4S6 1674 aa32.09■■■□□ 2.73
LSG1-208ENST00000480853 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.73
LSG1-208ENST00000480853 PDS5BQ9NTI5 1447 aa32.06■■■□□ 2.72
LSG1-208ENST00000480853 RSF1Q96T23 1441 aaPredicted RBP32.03■■■□□ 2.72
LSG1-208ENST00000480853 MRC2Q9UBG0 1479 aa31.78■■■□□ 2.68
LSG1-208ENST00000480853 TOP2AP11388 1531 aaKnown RBP31.76■■■□□ 2.68
LSG1-208ENST00000480853 CFTRP13569 1480 aa31.71■■■□□ 2.67
LSG1-208ENST00000480853 FANCD2Q9BXW9 1451 aa31.7■■■□□ 2.66
LSG1-208ENST00000480853 WDR62O43379 1518 aa31.67■■■□□ 2.66
LSG1-208ENST00000480853 CEP164Q9UPV0 1460 aa31.66■■■□□ 2.66
LSG1-208ENST00000480853 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
LSG1-208ENST00000480853 URB2Q14146 1524 aaKnown RBP31.46■■■□□ 2.63
LSG1-208ENST00000480853 PRDM2Q13029 1718 aa31.29■■■□□ 2.6
LSG1-208ENST00000480853 TRIM41Q8WV44 630 aa31.15■■■□□ 2.58
LSG1-208ENST00000480853 OSCARQ8IYS5 282 aa31.12■■■□□ 2.57
LSG1-208ENST00000480853 TOPBP1Q92547 1522 aa31.12■■■□□ 2.57
LSG1-208ENST00000480853 ZNF608Q9ULD9 1512 aaPredicted RBP31.1■■■□□ 2.57
LSG1-208ENST00000480853 IFT140Q96RY7 1462 aa31.03■■■□□ 2.56
LSG1-208ENST00000480853 DNMBPQ6XZF7 1577 aa30.96■■■□□ 2.55
LSG1-208ENST00000480853 ABCC8Q09428 1581 aa30.95■■■□□ 2.54
LSG1-208ENST00000480853 AQRO60306 1485 aaKnown RBP eCLIP30.86■■■□□ 2.53
LSG1-208ENST00000480853 SUPT5HO00267 1087 aaKnown RBP30.85■■■□□ 2.53
LSG1-208ENST00000480853 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.52
LSG1-208ENST00000480853 POLA1P09884 1462 aaPredicted RBP30.81■■■□□ 2.52
LSG1-208ENST00000480853 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
LSG1-208ENST00000480853 RAD54L2Q9Y4B4 1467 aa30.79■■■□□ 2.52
LSG1-208ENST00000480853 SOGA1O94964 1423 aa30.72■■■□□ 2.51
LSG1-208ENST00000480853 TDRD9Q8NDG6 1382 aaKnown RBP30.69■■■□□ 2.5
LSG1-208ENST00000480853 FBLN2P98095 1184 aa30.66■■■□□ 2.5
LSG1-208ENST00000480853 CUX1P39880 1505 aa30.66■■■□□ 2.5
LSG1-208ENST00000480853 RIMBP3CA6NJZ7 1639 aa30.65■■■□□ 2.5
LSG1-208ENST00000480853 RIMBP3BA6NNM3 1639 aa30.65■■■□□ 2.5
LSG1-208ENST00000480853 RIMBP3Q9UFD9 1639 aa30.65■■■□□ 2.5
LSG1-208ENST00000480853 FGD5Q6ZNL6 1462 aa30.64■■■□□ 2.5
LSG1-208ENST00000480853 CHD1O14646 1710 aa30.6■■■□□ 2.49
LSG1-208ENST00000480853 ARHGEF11O15085 1522 aa30.55■■■□□ 2.48
LSG1-208ENST00000480853 CYB5RLQ6IPT4 315 aa30.46■■■□□ 2.47
LSG1-208ENST00000480853 SNAPC4Q5SXM2 1469 aa30.45■■■□□ 2.47
LSG1-208ENST00000480853 CHMP7Q8WUX9 453 aaPredicted RBP30.39■■■□□ 2.46
LSG1-208ENST00000480853 GRIN2BQ13224 1484 aa30.36■■■□□ 2.45
LSG1-208ENST00000480853 WDR97A6NE52 1622 aa30.33■■■□□ 2.45
LSG1-208ENST00000480853 GAPVD1Q14C86 1478 aa30.3■■■□□ 2.44
LSG1-208ENST00000480853 MAGI1Q96QZ7 1491 aaPredicted RBP30.3■■■□□ 2.44
LSG1-208ENST00000480853 ARAP1Q96P48 1450 aa30.29■■■□□ 2.44
LSG1-208ENST00000480853 ABCA10Q8WWZ4 1543 aa30.26■■■□□ 2.43
LSG1-208ENST00000480853 SYNJ2O15056 1496 aa30.23■■■□□ 2.43
LSG1-208ENST00000480853 PBRM1Q86U86 1689 aa30.23■■■□□ 2.43
LSG1-208ENST00000480853 CLASP1Q7Z460 1538 aa30.22■■■□□ 2.43
LSG1-208ENST00000480853 ABCA5Q8WWZ7 1642 aa30.18■■■□□ 2.42
LSG1-208ENST00000480853 SYNJ1O43426 1573 aa30.17■■■□□ 2.42
LSG1-208ENST00000480853 WRNQ14191 1432 aaPredicted RBP eCLIP30.16■■■□□ 2.42
LSG1-208ENST00000480853 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
LSG1-208ENST00000480853 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
LSG1-208ENST00000480853 TRHP20396 242 aaPredicted RBP30.06■■■□□ 2.4
LSG1-208ENST00000480853 GRIN2AQ12879 1464 aa29.97■■■□□ 2.39
LSG1-208ENST00000480853 ADAMTS12P58397 1594 aa29.94■■■□□ 2.38
LSG1-208ENST00000480853 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
LSG1-208ENST00000480853 FHAD1B1AJZ9 1412 aa29.89■■■□□ 2.38
LSG1-208ENST00000480853 CEP170Q5SW79 1584 aa29.89■■■□□ 2.38
LSG1-208ENST00000480853 NUP160Q12769 1436 aa29.87■■■□□ 2.37
LSG1-208ENST00000480853 ERICH3Q5RHP9 1530 aa29.84■■■□□ 2.37
LSG1-208ENST00000480853 SHROOM2Q13796 1616 aa29.69■■■□□ 2.34
LSG1-208ENST00000480853 JPH4Q96JJ6 628 aa29.68■■■□□ 2.34
LSG1-208ENST00000480853 IGF1RP08069 1367 aa29.64■■■□□ 2.34
LSG1-208ENST00000480853 PRG4Q92954 1404 aaPredicted RBP29.63■■■□□ 2.33
LSG1-208ENST00000480853 KIF27Q86VH2 1401 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms