RNA–Protein interactions for RNA: ENST00000480807.1

SNX8-208, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 534 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-208ENST00000480807 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
SNX8-208ENST00000480807 CCDC180Q9P1Z9 1646 aa33.57■■■□□ 2.97
SNX8-208ENST00000480807 ABCC9O60706 1549 aa33.41■■■□□ 2.94
SNX8-208ENST00000480807 RB1CC1Q8TDY2 1594 aa31.79■■■□□ 2.68
SNX8-208ENST00000480807 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
SNX8-208ENST00000480807 NACADO15069 1562 aa31.59■■■□□ 2.65
SNX8-208ENST00000480807 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
SNX8-208ENST00000480807 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
SNX8-208ENST00000480807 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
SNX8-208ENST00000480807 DCAF1Q9Y4B6 1507 aa31.2■■■□□ 2.59
SNX8-208ENST00000480807 PABPN1Q86U42 306 aaKnown RBP eCLIP31.17■■■□□ 2.58
SNX8-208ENST00000480807 UNC13AQ9UPW8 1703 aa31.08■■■□□ 2.57
SNX8-208ENST00000480807 BICRAQ9NZM4 1560 aa30.86■■■□□ 2.53
SNX8-208ENST00000480807 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
SNX8-208ENST00000480807 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
SNX8-208ENST00000480807 CC2D2AQ9P2K1 1620 aa30.15■■■□□ 2.42
SNX8-208ENST00000480807 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
SNX8-208ENST00000480807 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
SNX8-208ENST00000480807 SMARCA4P51532 1647 aa29.21■■■□□ 2.27
SNX8-208ENST00000480807 BAZ1AQ9NRL2 1556 aaPredicted RBP29.21■■■□□ 2.27
SNX8-208ENST00000480807 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
SNX8-208ENST00000480807 ATAD2BQ9ULI0 1458 aa29.12■■■□□ 2.25
SNX8-208ENST00000480807 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
SNX8-208ENST00000480807 PEG3Q9GZU2 1588 aa28.96■■■□□ 2.23
SNX8-208ENST00000480807 HMGXB3Q12766 1538 aa28.95■■■□□ 2.23
SNX8-208ENST00000480807 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
SNX8-208ENST00000480807 BAZ1BQ9UIG0 1483 aaKnown RBP28.85■■■□□ 2.21
SNX8-208ENST00000480807 ERCC6Q03468 1493 aa28.84■■■□□ 2.21
SNX8-208ENST00000480807 NESP48681 1621 aa28.73■■■□□ 2.19
SNX8-208ENST00000480807 DNAJC5Q9H3Z4 198 aa28.71■■■□□ 2.19
SNX8-208ENST00000480807 CUX2O14529 1486 aa28.68■■■□□ 2.18
SNX8-208ENST00000480807 WIZO95785 1651 aa28.64■■■□□ 2.18
SNX8-208ENST00000480807 RSF1Q96T23 1441 aaPredicted RBP28.59■■■□□ 2.17
SNX8-208ENST00000480807 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
SNX8-208ENST00000480807 TOP2AP11388 1531 aaKnown RBP28.39■■■□□ 2.14
SNX8-208ENST00000480807 THOC2Q8NI27 1593 aaKnown RBP28.36■■■□□ 2.13
SNX8-208ENST00000480807 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
SNX8-208ENST00000480807 KIF21AQ7Z4S6 1674 aa28.34■■■□□ 2.13
SNX8-208ENST00000480807 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
SNX8-208ENST00000480807 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
SNX8-208ENST00000480807 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
SNX8-208ENST00000480807 CFTRP13569 1480 aa28.01■■■□□ 2.07
SNX8-208ENST00000480807 WDR62O43379 1518 aa28■■■□□ 2.07
SNX8-208ENST00000480807 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
SNX8-208ENST00000480807 CCDC88BA6NC98 1476 aa27.99■■■□□ 2.07
SNX8-208ENST00000480807 PRDM2Q13029 1718 aa27.96■■■□□ 2.07
SNX8-208ENST00000480807 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
SNX8-208ENST00000480807 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
SNX8-208ENST00000480807 ABCC8Q09428 1581 aa27.51■■□□□ 1.99
SNX8-208ENST00000480807 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
SNX8-208ENST00000480807 OSCARQ8IYS5 282 aa27.46■■□□□ 1.99
SNX8-208ENST00000480807 TRIM41Q8WV44 630 aa27.46■■□□□ 1.99
SNX8-208ENST00000480807 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
SNX8-208ENST00000480807 ZNF608Q9ULD9 1512 aaPredicted RBP27.41■■□□□ 1.98
SNX8-208ENST00000480807 DNMBPQ6XZF7 1577 aa27.41■■□□□ 1.98
SNX8-208ENST00000480807 EIF4G3O43432 1585 aaKnown RBP27.24■■□□□ 1.95
SNX8-208ENST00000480807 POLA1P09884 1462 aaPredicted RBP27.21■■□□□ 1.95
SNX8-208ENST00000480807 AQRO60306 1485 aaKnown RBP eCLIP27.2■■□□□ 1.95
SNX8-208ENST00000480807 TARBP1Q13395 1621 aaKnown RBP27.2■■□□□ 1.95
SNX8-208ENST00000480807 CUX1P39880 1505 aa27.16■■□□□ 1.94
SNX8-208ENST00000480807 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
SNX8-208ENST00000480807 SOGA1O94964 1423 aa27.11■■□□□ 1.93
SNX8-208ENST00000480807 FGD5Q6ZNL6 1462 aa27.08■■□□□ 1.93
SNX8-208ENST00000480807 FBLN2P98095 1184 aa27.06■■□□□ 1.92
SNX8-208ENST00000480807 TDRD9Q8NDG6 1382 aaKnown RBP27.06■■□□□ 1.92
SNX8-208ENST00000480807 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
SNX8-208ENST00000480807 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
SNX8-208ENST00000480807 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
SNX8-208ENST00000480807 WDR97A6NE52 1622 aa27.05■■□□□ 1.92
SNX8-208ENST00000480807 CHD1O14646 1710 aa27.03■■□□□ 1.92
SNX8-208ENST00000480807 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
SNX8-208ENST00000480807 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
SNX8-208ENST00000480807 TOP2BQ02880 1626 aa26.99■■□□□ 1.91
SNX8-208ENST00000480807 ARHGEF11O15085 1522 aa26.98■■□□□ 1.91
SNX8-208ENST00000480807 SNAPC4Q5SXM2 1469 aa26.91■■□□□ 1.9
SNX8-208ENST00000480807 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
SNX8-208ENST00000480807 ABCA10Q8WWZ4 1543 aa26.86■■□□□ 1.89
SNX8-208ENST00000480807 CYB5RLQ6IPT4 315 aa26.85■■□□□ 1.89
SNX8-208ENST00000480807 CHMP7Q8WUX9 453 aaPredicted RBP26.85■■□□□ 1.89
SNX8-208ENST00000480807 GRIN2BQ13224 1484 aa26.84■■□□□ 1.89
SNX8-208ENST00000480807 MAGI1Q96QZ7 1491 aaPredicted RBP26.81■■□□□ 1.88
SNX8-208ENST00000480807 GAPVD1Q14C86 1478 aa26.77■■□□□ 1.88
SNX8-208ENST00000480807 PBRM1Q86U86 1689 aa26.76■■□□□ 1.87
SNX8-208ENST00000480807 ABCA5Q8WWZ7 1642 aa26.76■■□□□ 1.87
SNX8-208ENST00000480807 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
SNX8-208ENST00000480807 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
SNX8-208ENST00000480807 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
SNX8-208ENST00000480807 ERICH3Q5RHP9 1530 aa26.58■■□□□ 1.85
SNX8-208ENST00000480807 TRHP20396 242 aaPredicted RBP26.53■■□□□ 1.84
SNX8-208ENST00000480807 ADAMTS12P58397 1594 aa26.5■■□□□ 1.83
SNX8-208ENST00000480807 GRIN2AQ12879 1464 aa26.49■■□□□ 1.83
SNX8-208ENST00000480807 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
SNX8-208ENST00000480807 FHAD1B1AJZ9 1412 aa26.46■■□□□ 1.83
SNX8-208ENST00000480807 CEP170Q5SW79 1584 aa26.39■■□□□ 1.82
SNX8-208ENST00000480807 NUP160Q12769 1436 aa26.38■■□□□ 1.81
SNX8-208ENST00000480807 CUL7Q14999 1698 aa26.38■■□□□ 1.81
SNX8-208ENST00000480807 ERCC6L2Q5T890 1561 aa26.33■■□□□ 1.81
SNX8-208ENST00000480807 IGF1RP08069 1367 aa26.29■■□□□ 1.8
SNX8-208ENST00000480807 SHROOM2Q13796 1616 aa26.23■■□□□ 1.79
SNX8-208ENST00000480807 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms