RNA–Protein interactions for RNA: ENST00000480713.1

NDUFA3-211, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2

Gene NDUFA3, Length 282 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-211ENST00000480713 NISCHQ9Y2I1 1504 aa17.15■□□□□ 0.34
NDUFA3-211ENST00000480713 ABCC9O60706 1549 aa15.62■□□□□ 0.09
NDUFA3-211ENST00000480713 CCDC180Q9P1Z9 1646 aa15.33■□□□□ 0.04
NDUFA3-211ENST00000480713 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
NDUFA3-211ENST00000480713 RB1CC1Q8TDY2 1594 aa14.75□□□□□ -0.05
NDUFA3-211ENST00000480713 DCAF8L2P0C7V8 631 aa14.64□□□□□ -0.07
NDUFA3-211ENST00000480713 NACADO15069 1562 aa14.64□□□□□ -0.07
NDUFA3-211ENST00000480713 PABPN1Q86U42 306 aaKnown RBP eCLIP14.6□□□□□ -0.07
NDUFA3-211ENST00000480713 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
NDUFA3-211ENST00000480713 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
NDUFA3-211ENST00000480713 UNC13AQ9UPW8 1703 aa14.29□□□□□ -0.12
NDUFA3-211ENST00000480713 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
NDUFA3-211ENST00000480713 ZCCHC6Q5VYS8 1495 aaKnown RBP14.14□□□□□ -0.15
NDUFA3-211ENST00000480713 SHROOM4Q9ULL8 1493 aa14.14□□□□□ -0.15
NDUFA3-211ENST00000480713 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
NDUFA3-211ENST00000480713 CC2D2AQ9P2K1 1620 aa14.06□□□□□ -0.16
NDUFA3-211ENST00000480713 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NDUFA3-211ENST00000480713 SCRIBQ14160 1630 aa13.98□□□□□ -0.17
NDUFA3-211ENST00000480713 DNAJC5Q9H3Z4 198 aa13.85□□□□□ -0.19
NDUFA3-211ENST00000480713 NCAPD3P42695 1498 aa13.59□□□□□ -0.23
NDUFA3-211ENST00000480713 CUX2O14529 1486 aa13.54□□□□□ -0.24
NDUFA3-211ENST00000480713 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
NDUFA3-211ENST00000480713 ERCC6Q03468 1493 aa13.48□□□□□ -0.25
NDUFA3-211ENST00000480713 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
NDUFA3-211ENST00000480713 NESP48681 1621 aa13.37□□□□□ -0.27
NDUFA3-211ENST00000480713 HMGXB3Q12766 1538 aa13.37□□□□□ -0.27
NDUFA3-211ENST00000480713 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
NDUFA3-211ENST00000480713 BAZ1BQ9UIG0 1483 aaKnown RBP13.3□□□□□ -0.28
NDUFA3-211ENST00000480713 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
NDUFA3-211ENST00000480713 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
NDUFA3-211ENST00000480713 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
NDUFA3-211ENST00000480713 LAMC3Q9Y6N6 1575 aa13.21□□□□□ -0.29
NDUFA3-211ENST00000480713 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
NDUFA3-211ENST00000480713 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
NDUFA3-211ENST00000480713 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
NDUFA3-211ENST00000480713 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
NDUFA3-211ENST00000480713 KIF21AQ7Z4S6 1674 aa13.07□□□□□ -0.32
NDUFA3-211ENST00000480713 MRC2Q9UBG0 1479 aa13.06□□□□□ -0.32
NDUFA3-211ENST00000480713 WDR62O43379 1518 aa13.02□□□□□ -0.33
NDUFA3-211ENST00000480713 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
NDUFA3-211ENST00000480713 WIZO95785 1651 aa12.98□□□□□ -0.33
NDUFA3-211ENST00000480713 FANCD2Q9BXW9 1451 aa12.97□□□□□ -0.33
NDUFA3-211ENST00000480713 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
NDUFA3-211ENST00000480713 CFTRP13569 1480 aa12.96□□□□□ -0.34
NDUFA3-211ENST00000480713 RSF1Q96T23 1441 aaPredicted RBP12.92□□□□□ -0.34
NDUFA3-211ENST00000480713 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
NDUFA3-211ENST00000480713 TOP2AP11388 1531 aaKnown RBP12.82□□□□□ -0.36
NDUFA3-211ENST00000480713 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
NDUFA3-211ENST00000480713 IFT140Q96RY7 1462 aa12.75□□□□□ -0.37
NDUFA3-211ENST00000480713 ZNF608Q9ULD9 1512 aaPredicted RBP12.75□□□□□ -0.37
NDUFA3-211ENST00000480713 TOPBP1Q92547 1522 aa12.69□□□□□ -0.38
NDUFA3-211ENST00000480713 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
NDUFA3-211ENST00000480713 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
NDUFA3-211ENST00000480713 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
NDUFA3-211ENST00000480713 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
NDUFA3-211ENST00000480713 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
NDUFA3-211ENST00000480713 ARHGEF11O15085 1522 aa12.67□□□□□ -0.38
NDUFA3-211ENST00000480713 AQRO60306 1485 aaKnown RBP eCLIP12.64□□□□□ -0.39
NDUFA3-211ENST00000480713 FBLN2P98095 1184 aa12.62□□□□□ -0.39
NDUFA3-211ENST00000480713 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
NDUFA3-211ENST00000480713 TRHP20396 242 aaPredicted RBP12.58□□□□□ -0.4
NDUFA3-211ENST00000480713 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
NDUFA3-211ENST00000480713 EIF4G3O43432 1585 aaKnown RBP12.56□□□□□ -0.4
NDUFA3-211ENST00000480713 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
NDUFA3-211ENST00000480713 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
NDUFA3-211ENST00000480713 SOGA1O94964 1423 aa12.55□□□□□ -0.4
NDUFA3-211ENST00000480713 POLA1P09884 1462 aaPredicted RBP12.55□□□□□ -0.4
NDUFA3-211ENST00000480713 ARAP1Q96P48 1450 aa12.53□□□□□ -0.4
NDUFA3-211ENST00000480713 RAD54L2Q9Y4B4 1467 aa12.53□□□□□ -0.4
NDUFA3-211ENST00000480713 CHMP7Q8WUX9 453 aaPredicted RBP12.51□□□□□ -0.41
NDUFA3-211ENST00000480713 CHD1O14646 1710 aa12.45□□□□□ -0.42
NDUFA3-211ENST00000480713 SNAPC4Q5SXM2 1469 aa12.45□□□□□ -0.42
NDUFA3-211ENST00000480713 FGD5Q6ZNL6 1462 aa12.44□□□□□ -0.42
NDUFA3-211ENST00000480713 GRIN2BQ13224 1484 aa12.42□□□□□ -0.42
NDUFA3-211ENST00000480713 MAGI1Q96QZ7 1491 aaPredicted RBP12.41□□□□□ -0.42
NDUFA3-211ENST00000480713 CLASP1Q7Z460 1538 aa12.41□□□□□ -0.42
NDUFA3-211ENST00000480713 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
NDUFA3-211ENST00000480713 CUX1P39880 1505 aa12.4□□□□□ -0.42
NDUFA3-211ENST00000480713 SYNJ2O15056 1496 aa12.4□□□□□ -0.43
NDUFA3-211ENST00000480713 SYNJ1O43426 1573 aa12.37□□□□□ -0.43
NDUFA3-211ENST00000480713 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
NDUFA3-211ENST00000480713 AEBP2Q6ZN18 517 aaPredicted RBP12.33□□□□□ -0.44
NDUFA3-211ENST00000480713 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
NDUFA3-211ENST00000480713 WRNQ14191 1432 aaPredicted RBP eCLIP12.25□□□□□ -0.45
NDUFA3-211ENST00000480713 SUPT5HO00267 1087 aaKnown RBP12.24□□□□□ -0.45
NDUFA3-211ENST00000480713 GRIN2AQ12879 1464 aa12.24□□□□□ -0.45
NDUFA3-211ENST00000480713 ABCA5Q8WWZ7 1642 aa12.23□□□□□ -0.45
NDUFA3-211ENST00000480713 NUP160Q12769 1436 aa12.23□□□□□ -0.45
NDUFA3-211ENST00000480713 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.46
NDUFA3-211ENST00000480713 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
NDUFA3-211ENST00000480713 PBRM1Q86U86 1689 aa12.2□□□□□ -0.46
NDUFA3-211ENST00000480713 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
NDUFA3-211ENST00000480713 CEP170Q5SW79 1584 aa12.18□□□□□ -0.46
NDUFA3-211ENST00000480713 ADAMTS12P58397 1594 aa12.14□□□□□ -0.47
NDUFA3-211ENST00000480713 PRG4Q92954 1404 aaPredicted RBP12.14□□□□□ -0.47
NDUFA3-211ENST00000480713 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
NDUFA3-211ENST00000480713 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
NDUFA3-211ENST00000480713 SHROOM2Q13796 1616 aa12.12□□□□□ -0.47
NDUFA3-211ENST00000480713 NPM1P06748 294 aaKnown RBP eCLIP12.11□□□□□ -0.47
NDUFA3-211ENST00000480713 FAM69CQ0P6D2 419 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms