RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 NISCHQ9Y2I1 1504 aa25■■□□□ 1.59
TMEM40-207ENST00000480698 ABCC9O60706 1549 aa23.34■■□□□ 1.33
TMEM40-207ENST00000480698 CCDC180Q9P1Z9 1646 aa22.8■■□□□ 1.24
TMEM40-207ENST00000480698 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
TMEM40-207ENST00000480698 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
TMEM40-207ENST00000480698 NACADO15069 1562 aa21.7■■□□□ 1.06
TMEM40-207ENST00000480698 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
TMEM40-207ENST00000480698 UNC13AQ9UPW8 1703 aa21.53■■□□□ 1.04
TMEM40-207ENST00000480698 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
TMEM40-207ENST00000480698 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
TMEM40-207ENST00000480698 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
TMEM40-207ENST00000480698 CECR2Q9BXF3 1484 aa21.15■□□□□ 0.98
TMEM40-207ENST00000480698 SHROOM4Q9ULL8 1493 aa21.15■□□□□ 0.98
TMEM40-207ENST00000480698 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
TMEM40-207ENST00000480698 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.96
TMEM40-207ENST00000480698 EIF4G1Q04637 1599 aaKnown RBP20.94■□□□□ 0.94
TMEM40-207ENST00000480698 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
TMEM40-207ENST00000480698 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
TMEM40-207ENST00000480698 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
TMEM40-207ENST00000480698 CUX2O14529 1486 aa20.53■□□□□ 0.88
TMEM40-207ENST00000480698 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
TMEM40-207ENST00000480698 NCAPD3P42695 1498 aa20.06■□□□□ 0.8
TMEM40-207ENST00000480698 THOC2Q8NI27 1593 aaKnown RBP19.95■□□□□ 0.78
TMEM40-207ENST00000480698 NESP48681 1621 aa19.89■□□□□ 0.77
TMEM40-207ENST00000480698 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
TMEM40-207ENST00000480698 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
TMEM40-207ENST00000480698 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
TMEM40-207ENST00000480698 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
TMEM40-207ENST00000480698 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
TMEM40-207ENST00000480698 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
TMEM40-207ENST00000480698 KIF21AQ7Z4S6 1674 aa19.64■□□□□ 0.73
TMEM40-207ENST00000480698 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
TMEM40-207ENST00000480698 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
TMEM40-207ENST00000480698 PDS5BQ9NTI5 1447 aa19.52■□□□□ 0.72
TMEM40-207ENST00000480698 WDR62O43379 1518 aa19.5■□□□□ 0.71
TMEM40-207ENST00000480698 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
TMEM40-207ENST00000480698 MRC2Q9UBG0 1479 aa19.45■□□□□ 0.7
TMEM40-207ENST00000480698 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
TMEM40-207ENST00000480698 OSCARQ8IYS5 282 aa19.31■□□□□ 0.68
TMEM40-207ENST00000480698 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
TMEM40-207ENST00000480698 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
TMEM40-207ENST00000480698 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
TMEM40-207ENST00000480698 MROH2BQ7Z745 1585 aa19.23■□□□□ 0.67
TMEM40-207ENST00000480698 CEP164Q9UPV0 1460 aa19.19■□□□□ 0.66
TMEM40-207ENST00000480698 ARHGEF11O15085 1522 aa19.14■□□□□ 0.65
TMEM40-207ENST00000480698 FANCD2Q9BXW9 1451 aa19.11■□□□□ 0.65
TMEM40-207ENST00000480698 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
TMEM40-207ENST00000480698 CFTRP13569 1480 aa19.03■□□□□ 0.64
TMEM40-207ENST00000480698 WIZO95785 1651 aa18.93■□□□□ 0.62
TMEM40-207ENST00000480698 ARAP1Q96P48 1450 aa18.92■□□□□ 0.62
TMEM40-207ENST00000480698 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
TMEM40-207ENST00000480698 IFT140Q96RY7 1462 aa18.86■□□□□ 0.61
TMEM40-207ENST00000480698 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
TMEM40-207ENST00000480698 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
TMEM40-207ENST00000480698 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
TMEM40-207ENST00000480698 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
TMEM40-207ENST00000480698 PRDM2Q13029 1718 aa18.77■□□□□ 0.59
TMEM40-207ENST00000480698 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
TMEM40-207ENST00000480698 CHD1O14646 1710 aa18.74■□□□□ 0.59
TMEM40-207ENST00000480698 TOP2AP11388 1531 aaKnown RBP18.69■□□□□ 0.58
TMEM40-207ENST00000480698 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
TMEM40-207ENST00000480698 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
TMEM40-207ENST00000480698 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
TMEM40-207ENST00000480698 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
TMEM40-207ENST00000480698 AQRO60306 1485 aaKnown RBP eCLIP18.58■□□□□ 0.56
TMEM40-207ENST00000480698 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
TMEM40-207ENST00000480698 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
TMEM40-207ENST00000480698 CCDC88BA6NC98 1476 aa18.44■□□□□ 0.54
TMEM40-207ENST00000480698 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
TMEM40-207ENST00000480698 SYNJ1O43426 1573 aa18.42■□□□□ 0.54
TMEM40-207ENST00000480698 FBLN2P98095 1184 aa18.41■□□□□ 0.54
TMEM40-207ENST00000480698 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
TMEM40-207ENST00000480698 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
TMEM40-207ENST00000480698 MAGI1Q96QZ7 1491 aaPredicted RBP18.37■□□□□ 0.53
TMEM40-207ENST00000480698 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
TMEM40-207ENST00000480698 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
TMEM40-207ENST00000480698 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
TMEM40-207ENST00000480698 SOGA1O94964 1423 aa18.27■□□□□ 0.52
TMEM40-207ENST00000480698 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
TMEM40-207ENST00000480698 CHMP7Q8WUX9 453 aaPredicted RBP18.24■□□□□ 0.51
TMEM40-207ENST00000480698 KIF13AQ9H1H9 1805 aa18.22■□□□□ 0.51
TMEM40-207ENST00000480698 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.51
TMEM40-207ENST00000480698 ERCC6L2Q5T890 1561 aa18.21■□□□□ 0.51
TMEM40-207ENST00000480698 ILDR1Q86SU0 546 aaPredicted RBP18.2■□□□□ 0.5
TMEM40-207ENST00000480698 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
TMEM40-207ENST00000480698 CUX1P39880 1505 aa18.12■□□□□ 0.49
TMEM40-207ENST00000480698 SHROOM2Q13796 1616 aa18.1■□□□□ 0.49
TMEM40-207ENST00000480698 CEP170Q5SW79 1584 aa18.1■□□□□ 0.49
TMEM40-207ENST00000480698 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
TMEM40-207ENST00000480698 NUP160Q12769 1436 aa18.07■□□□□ 0.48
TMEM40-207ENST00000480698 KDM4FA0A1W2PPD8 638 aa18.07■□□□□ 0.48
TMEM40-207ENST00000480698 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
TMEM40-207ENST00000480698 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
TMEM40-207ENST00000480698 ABCC10Q5T3U5 1492 aa18.01■□□□□ 0.47
TMEM40-207ENST00000480698 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
TMEM40-207ENST00000480698 MAPKBP1O60336 1514 aa17.98■□□□□ 0.47
TMEM40-207ENST00000480698 DIP2BQ9P265 1576 aa17.97■□□□□ 0.47
TMEM40-207ENST00000480698 KDM6BO15054 1643 aa17.93■□□□□ 0.46
TMEM40-207ENST00000480698 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
TMEM40-207ENST00000480698 FHAD1B1AJZ9 1412 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms