RNA–Protein interactions for RNA: ENST00000480684.1

PAX8-209, Transcript of paired box 8, humanhuman

TSL 1 (best)

Gene PAX8, Length 527 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-209ENST00000480684 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
PAX8-209ENST00000480684 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
PAX8-209ENST00000480684 ABCC9O60706 1549 aa24.61■■□□□ 1.53
PAX8-209ENST00000480684 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
PAX8-209ENST00000480684 NACADO15069 1562 aa24.04■■□□□ 1.44
PAX8-209ENST00000480684 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
PAX8-209ENST00000480684 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
PAX8-209ENST00000480684 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
PAX8-209ENST00000480684 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
PAX8-209ENST00000480684 UNC13AQ9UPW8 1703 aa23.39■■□□□ 1.33
PAX8-209ENST00000480684 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
PAX8-209ENST00000480684 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
PAX8-209ENST00000480684 BICRAQ9NZM4 1560 aa23.12■■□□□ 1.29
PAX8-209ENST00000480684 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
PAX8-209ENST00000480684 EIF4G1Q04637 1599 aaKnown RBP22.55■■□□□ 1.2
PAX8-209ENST00000480684 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
PAX8-209ENST00000480684 SMARCA4P51532 1647 aa22.41■■□□□ 1.18
PAX8-209ENST00000480684 CECR2Q9BXF3 1484 aa22.35■■□□□ 1.17
PAX8-209ENST00000480684 CC2D2AQ9P2K1 1620 aa22.35■■□□□ 1.17
PAX8-209ENST00000480684 SMARCA2P51531 1590 aa22.25■■□□□ 1.15
PAX8-209ENST00000480684 MROH2BQ7Z745 1585 aa22.21■■□□□ 1.15
PAX8-209ENST00000480684 PEG3Q9GZU2 1588 aa22.21■■□□□ 1.15
PAX8-209ENST00000480684 ATAD2BQ9ULI0 1458 aa22.13■■□□□ 1.13
PAX8-209ENST00000480684 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
PAX8-209ENST00000480684 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
PAX8-209ENST00000480684 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
PAX8-209ENST00000480684 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
PAX8-209ENST00000480684 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
PAX8-209ENST00000480684 WIZO95785 1651 aa22.02■■□□□ 1.12
PAX8-209ENST00000480684 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
PAX8-209ENST00000480684 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
PAX8-209ENST00000480684 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
PAX8-209ENST00000480684 CCDC88BA6NC98 1476 aa21.52■■□□□ 1.03
PAX8-209ENST00000480684 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
PAX8-209ENST00000480684 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
PAX8-209ENST00000480684 CFTRP13569 1480 aa21.41■■□□□ 1.02
PAX8-209ENST00000480684 NESP48681 1621 aa21.36■■□□□ 1.01
PAX8-209ENST00000480684 PDS5BQ9NTI5 1447 aa21.35■■□□□ 1.01
PAX8-209ENST00000480684 ERCC6Q03468 1493 aa21.3■■□□□ 1
PAX8-209ENST00000480684 KIF21AQ7Z4S6 1674 aa21.24■□□□□ 0.99
PAX8-209ENST00000480684 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
PAX8-209ENST00000480684 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
PAX8-209ENST00000480684 THOC2Q8NI27 1593 aaKnown RBP21.12■□□□□ 0.97
PAX8-209ENST00000480684 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
PAX8-209ENST00000480684 WDR62O43379 1518 aa21.04■□□□□ 0.96
PAX8-209ENST00000480684 ABCC8Q09428 1581 aa21.04■□□□□ 0.96
PAX8-209ENST00000480684 CUX2O14529 1486 aa21■□□□□ 0.95
PAX8-209ENST00000480684 DNMBPQ6XZF7 1577 aa20.99■□□□□ 0.95
PAX8-209ENST00000480684 URB2Q14146 1524 aaKnown RBP20.95■□□□□ 0.94
PAX8-209ENST00000480684 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
PAX8-209ENST00000480684 WRNQ14191 1432 aaPredicted RBP eCLIP20.88■□□□□ 0.93
PAX8-209ENST00000480684 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
PAX8-209ENST00000480684 CUX1P39880 1505 aa20.86■□□□□ 0.93
PAX8-209ENST00000480684 TOP2BQ02880 1626 aa20.85■□□□□ 0.93
PAX8-209ENST00000480684 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
PAX8-209ENST00000480684 POLA1P09884 1462 aaPredicted RBP20.76■□□□□ 0.91
PAX8-209ENST00000480684 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
PAX8-209ENST00000480684 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
PAX8-209ENST00000480684 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
PAX8-209ENST00000480684 TARBP1Q13395 1621 aaKnown RBP20.67■□□□□ 0.9
PAX8-209ENST00000480684 SOGA1O94964 1423 aa20.64■□□□□ 0.89
PAX8-209ENST00000480684 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
PAX8-209ENST00000480684 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
PAX8-209ENST00000480684 RAD54L2Q9Y4B4 1467 aa20.57■□□□□ 0.88
PAX8-209ENST00000480684 ABCA5Q8WWZ7 1642 aa20.53■□□□□ 0.88
PAX8-209ENST00000480684 TRIM41Q8WV44 630 aa20.52■□□□□ 0.88
PAX8-209ENST00000480684 ZNF608Q9ULD9 1512 aaPredicted RBP20.5■□□□□ 0.87
PAX8-209ENST00000480684 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
PAX8-209ENST00000480684 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
PAX8-209ENST00000480684 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
PAX8-209ENST00000480684 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
PAX8-209ENST00000480684 TDRD9Q8NDG6 1382 aaKnown RBP20.42■□□□□ 0.86
PAX8-209ENST00000480684 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
PAX8-209ENST00000480684 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
PAX8-209ENST00000480684 AQRO60306 1485 aaKnown RBP eCLIP20.41■□□□□ 0.86
PAX8-209ENST00000480684 MAGI1Q96QZ7 1491 aaPredicted RBP20.4■□□□□ 0.86
PAX8-209ENST00000480684 EEA1Q15075 1411 aa20.36■□□□□ 0.85
PAX8-209ENST00000480684 CUL7Q14999 1698 aa20.35■□□□□ 0.85
PAX8-209ENST00000480684 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
PAX8-209ENST00000480684 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
PAX8-209ENST00000480684 SYNJ2O15056 1496 aa20.27■□□□□ 0.84
PAX8-209ENST00000480684 FHAD1B1AJZ9 1412 aa20.26■□□□□ 0.83
PAX8-209ENST00000480684 CHD1O14646 1710 aa20.24■□□□□ 0.83
PAX8-209ENST00000480684 IGF1RP08069 1367 aa20.19■□□□□ 0.82
PAX8-209ENST00000480684 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
PAX8-209ENST00000480684 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
PAX8-209ENST00000480684 CHMP7Q8WUX9 453 aaPredicted RBP20.14■□□□□ 0.81
PAX8-209ENST00000480684 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
PAX8-209ENST00000480684 RAPGEF2Q9Y4G8 1499 aa20.11■□□□□ 0.81
PAX8-209ENST00000480684 KIF21BO75037 1637 aa20.09■□□□□ 0.81
PAX8-209ENST00000480684 FBLN2P98095 1184 aa20.09■□□□□ 0.81
PAX8-209ENST00000480684 PRXQ9BXM0 1461 aa20.09■□□□□ 0.81
PAX8-209ENST00000480684 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
PAX8-209ENST00000480684 NUP160Q12769 1436 aa20.06■□□□□ 0.8
PAX8-209ENST00000480684 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
PAX8-209ENST00000480684 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
PAX8-209ENST00000480684 CLASP1Q7Z460 1538 aa20.02■□□□□ 0.8
PAX8-209ENST00000480684 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
PAX8-209ENST00000480684 FAM9AQ8IZU1 332 aaPredicted RBP19.98■□□□□ 0.79
PAX8-209ENST00000480684 GOLGA3Q08378 1498 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms