RNA–Protein interactions for RNA: ENST00000480633.1

PRKCE-210, Transcript of protein kinase C epsilon, humanhuman

TSL 2

Gene PRKCE, Length 621 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCE-210ENST00000480633 NISCHQ9Y2I1 1504 aa36.48■■■■□ 3.43
PRKCE-210ENST00000480633 ABCC9O60706 1549 aa32.95■■■□□ 2.87
PRKCE-210ENST00000480633 CCDC180Q9P1Z9 1646 aa32.8■■■□□ 2.84
PRKCE-210ENST00000480633 RB1CC1Q8TDY2 1594 aa31.28■■■□□ 2.6
PRKCE-210ENST00000480633 DNAJC5BQ9UF47 199 aa31.1■■■□□ 2.57
PRKCE-210ENST00000480633 NACADO15069 1562 aa31.03■■■□□ 2.56
PRKCE-210ENST00000480633 DCAF8L2P0C7V8 631 aa30.82■■■□□ 2.52
PRKCE-210ENST00000480633 PABPN1Q86U42 306 aaKnown RBP eCLIP30.66■■■□□ 2.5
PRKCE-210ENST00000480633 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
PRKCE-210ENST00000480633 MYO15BQ96JP2 1530 aa30.56■■■□□ 2.48
PRKCE-210ENST00000480633 BICRAQ9NZM4 1560 aa30.43■■■□□ 2.46
PRKCE-210ENST00000480633 ZCCHC6Q5VYS8 1495 aaKnown RBP30.19■■■□□ 2.42
PRKCE-210ENST00000480633 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
PRKCE-210ENST00000480633 SHROOM4Q9ULL8 1493 aa29.94■■■□□ 2.38
PRKCE-210ENST00000480633 SCRIBQ14160 1630 aa29.87■■■□□ 2.37
PRKCE-210ENST00000480633 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.35
PRKCE-210ENST00000480633 CECR2Q9BXF3 1484 aa29.69■■■□□ 2.34
PRKCE-210ENST00000480633 EIF4G1Q04637 1599 aaKnown RBP29.66■■■□□ 2.34
PRKCE-210ENST00000480633 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
PRKCE-210ENST00000480633 DNAJC5Q9H3Z4 198 aa28.65■■■□□ 2.18
PRKCE-210ENST00000480633 ATAD2BQ9ULI0 1458 aa28.55■■■□□ 2.16
PRKCE-210ENST00000480633 SMARCA4P51532 1647 aa28.49■■■□□ 2.15
PRKCE-210ENST00000480633 CUX2O14529 1486 aa28.45■■■□□ 2.14
PRKCE-210ENST00000480633 SMARCA2P51531 1590 aa28.45■■■□□ 2.14
PRKCE-210ENST00000480633 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
PRKCE-210ENST00000480633 ERCC6Q03468 1493 aa28.42■■■□□ 2.14
PRKCE-210ENST00000480633 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
PRKCE-210ENST00000480633 NESP48681 1621 aa28.29■■■□□ 2.12
PRKCE-210ENST00000480633 BAZ1BQ9UIG0 1483 aaKnown RBP28.25■■■□□ 2.11
PRKCE-210ENST00000480633 PEG3Q9GZU2 1588 aa28.22■■■□□ 2.11
PRKCE-210ENST00000480633 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
PRKCE-210ENST00000480633 LAMC3Q9Y6N6 1575 aa28.03■■■□□ 2.08
PRKCE-210ENST00000480633 THOC2Q8NI27 1593 aaKnown RBP28.02■■■□□ 2.08
PRKCE-210ENST00000480633 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
PRKCE-210ENST00000480633 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
PRKCE-210ENST00000480633 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
PRKCE-210ENST00000480633 WIZO95785 1651 aa27.78■■■□□ 2.04
PRKCE-210ENST00000480633 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.02
PRKCE-210ENST00000480633 WDR62O43379 1518 aa27.59■■■□□ 2.01
PRKCE-210ENST00000480633 CEP164Q9UPV0 1460 aa27.49■■□□□ 1.99
PRKCE-210ENST00000480633 RSF1Q96T23 1441 aaPredicted RBP27.48■■□□□ 1.99
PRKCE-210ENST00000480633 FANCD2Q9BXW9 1451 aa27.45■■□□□ 1.99
PRKCE-210ENST00000480633 CFTRP13569 1480 aa27.44■■□□□ 1.98
PRKCE-210ENST00000480633 TOP2AP11388 1531 aaKnown RBP27.39■■□□□ 1.98
PRKCE-210ENST00000480633 TRIM41Q8WV44 630 aa27.29■■□□□ 1.96
PRKCE-210ENST00000480633 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
PRKCE-210ENST00000480633 PRDM2Q13029 1718 aa27.15■■□□□ 1.94
PRKCE-210ENST00000480633 OSCARQ8IYS5 282 aa27.13■■□□□ 1.93
PRKCE-210ENST00000480633 CCDC88BA6NC98 1476 aa27.1■■□□□ 1.93
PRKCE-210ENST00000480633 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.91
PRKCE-210ENST00000480633 IFT140Q96RY7 1462 aa26.95■■□□□ 1.91
PRKCE-210ENST00000480633 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
PRKCE-210ENST00000480633 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
PRKCE-210ENST00000480633 DNMBPQ6XZF7 1577 aa26.81■■□□□ 1.88
PRKCE-210ENST00000480633 RIMBP3CA6NJZ7 1639 aa26.81■■□□□ 1.88
PRKCE-210ENST00000480633 RIMBP3BA6NNM3 1639 aa26.81■■□□□ 1.88
PRKCE-210ENST00000480633 RIMBP3Q9UFD9 1639 aa26.81■■□□□ 1.88
PRKCE-210ENST00000480633 EIF4G3O43432 1585 aaKnown RBP26.79■■□□□ 1.88
PRKCE-210ENST00000480633 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
PRKCE-210ENST00000480633 ARHGEF11O15085 1522 aa26.7■■□□□ 1.87
PRKCE-210ENST00000480633 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
PRKCE-210ENST00000480633 POLA1P09884 1462 aaPredicted RBP26.64■■□□□ 1.86
PRKCE-210ENST00000480633 CHD1O14646 1710 aa26.63■■□□□ 1.85
PRKCE-210ENST00000480633 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
PRKCE-210ENST00000480633 SOGA1O94964 1423 aa26.51■■□□□ 1.83
PRKCE-210ENST00000480633 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
PRKCE-210ENST00000480633 FBLN2P98095 1184 aa26.5■■□□□ 1.83
PRKCE-210ENST00000480633 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
PRKCE-210ENST00000480633 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
PRKCE-210ENST00000480633 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
PRKCE-210ENST00000480633 CUX1P39880 1505 aa26.42■■□□□ 1.82
PRKCE-210ENST00000480633 WDR97A6NE52 1622 aa26.4■■□□□ 1.82
PRKCE-210ENST00000480633 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
PRKCE-210ENST00000480633 CLASP1Q7Z460 1538 aa26.32■■□□□ 1.8
PRKCE-210ENST00000480633 MAGI1Q96QZ7 1491 aaPredicted RBP26.31■■□□□ 1.8
PRKCE-210ENST00000480633 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
PRKCE-210ENST00000480633 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
PRKCE-210ENST00000480633 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
PRKCE-210ENST00000480633 TRHP20396 242 aaPredicted RBP26.24■■□□□ 1.79
PRKCE-210ENST00000480633 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
PRKCE-210ENST00000480633 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
PRKCE-210ENST00000480633 GAPVD1Q14C86 1478 aa26.18■■□□□ 1.78
PRKCE-210ENST00000480633 ABCA10Q8WWZ4 1543 aa26.14■■□□□ 1.77
PRKCE-210ENST00000480633 ABCA5Q8WWZ7 1642 aa26.13■■□□□ 1.77
PRKCE-210ENST00000480633 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
PRKCE-210ENST00000480633 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
PRKCE-210ENST00000480633 GRIN2AQ12879 1464 aa25.97■■□□□ 1.75
PRKCE-210ENST00000480633 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
PRKCE-210ENST00000480633 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.74
PRKCE-210ENST00000480633 ADAMTS12P58397 1594 aa25.94■■□□□ 1.74
PRKCE-210ENST00000480633 ERCC6L2Q5T890 1561 aa25.91■■□□□ 1.74
PRKCE-210ENST00000480633 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
PRKCE-210ENST00000480633 NUP160Q12769 1436 aa25.89■■□□□ 1.74
PRKCE-210ENST00000480633 FHAD1B1AJZ9 1412 aa25.84■■□□□ 1.73
PRKCE-210ENST00000480633 SHROOM2Q13796 1616 aa25.81■■□□□ 1.72
PRKCE-210ENST00000480633 ERICH3Q5RHP9 1530 aa25.81■■□□□ 1.72
PRKCE-210ENST00000480633 PRG4Q92954 1404 aaPredicted RBP25.65■■□□□ 1.7
PRKCE-210ENST00000480633 JPH4Q96JJ6 628 aa25.62■■□□□ 1.69
PRKCE-210ENST00000480633 RUSC2Q8N2Y8 1516 aa25.58■■□□□ 1.68
PRKCE-210ENST00000480633 AEBP2Q6ZN18 517 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms