RNA–Protein interactions for RNA: ENST00000480421.5

TMEM139-207, Transcript of transmembrane protein 139, humanhuman

TSL 3

Gene TMEM139, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-207ENST00000480421 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
TMEM139-207ENST00000480421 CCDC180Q9P1Z9 1646 aa26.79■■□□□ 1.88
TMEM139-207ENST00000480421 ABCC9O60706 1549 aa26.71■■□□□ 1.87
TMEM139-207ENST00000480421 RB1CC1Q8TDY2 1594 aa25.5■■□□□ 1.67
TMEM139-207ENST00000480421 NACADO15069 1562 aa25.28■■□□□ 1.64
TMEM139-207ENST00000480421 DNAJC5BQ9UF47 199 aa25.03■■□□□ 1.6
TMEM139-207ENST00000480421 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
TMEM139-207ENST00000480421 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
TMEM139-207ENST00000480421 MYO15BQ96JP2 1530 aa24.9■■□□□ 1.58
TMEM139-207ENST00000480421 PABPN1Q86U42 306 aaKnown RBP eCLIP24.79■■□□□ 1.56
TMEM139-207ENST00000480421 BICRAQ9NZM4 1560 aa24.68■■□□□ 1.54
TMEM139-207ENST00000480421 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
TMEM139-207ENST00000480421 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
TMEM139-207ENST00000480421 SHROOM4Q9ULL8 1493 aa24.42■■□□□ 1.5
TMEM139-207ENST00000480421 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
TMEM139-207ENST00000480421 CC2D2AQ9P2K1 1620 aa24.2■■□□□ 1.46
TMEM139-207ENST00000480421 EIF4G1Q04637 1599 aaKnown RBP24.12■■□□□ 1.45
TMEM139-207ENST00000480421 CECR2Q9BXF3 1484 aa24.09■■□□□ 1.45
TMEM139-207ENST00000480421 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
TMEM139-207ENST00000480421 SMARCA4P51532 1647 aa23.2■■□□□ 1.3
TMEM139-207ENST00000480421 SMARCA2P51531 1590 aa23.18■■□□□ 1.3
TMEM139-207ENST00000480421 ATAD2BQ9ULI0 1458 aa23.17■■□□□ 1.3
TMEM139-207ENST00000480421 HMGXB3Q12766 1538 aa23.16■■□□□ 1.3
TMEM139-207ENST00000480421 CUX2O14529 1486 aa23.13■■□□□ 1.29
TMEM139-207ENST00000480421 DNAJC5Q9H3Z4 198 aa23.13■■□□□ 1.29
TMEM139-207ENST00000480421 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
TMEM139-207ENST00000480421 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
TMEM139-207ENST00000480421 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
TMEM139-207ENST00000480421 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
TMEM139-207ENST00000480421 NESP48681 1621 aa22.91■■□□□ 1.26
TMEM139-207ENST00000480421 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
TMEM139-207ENST00000480421 MROH2BQ7Z745 1585 aa22.82■■□□□ 1.24
TMEM139-207ENST00000480421 THOC2Q8NI27 1593 aaKnown RBP22.79■■□□□ 1.24
TMEM139-207ENST00000480421 KIF21AQ7Z4S6 1674 aa22.76■■□□□ 1.23
TMEM139-207ENST00000480421 PDS5BQ9NTI5 1447 aa22.66■■□□□ 1.22
TMEM139-207ENST00000480421 WIZO95785 1651 aa22.62■■□□□ 1.21
TMEM139-207ENST00000480421 CADPSQ9ULU8 1353 aa22.55■■□□□ 1.2
TMEM139-207ENST00000480421 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
TMEM139-207ENST00000480421 WDR62O43379 1518 aa22.43■■□□□ 1.18
TMEM139-207ENST00000480421 CEP164Q9UPV0 1460 aa22.37■■□□□ 1.17
TMEM139-207ENST00000480421 FANCD2Q9BXW9 1451 aa22.31■■□□□ 1.16
TMEM139-207ENST00000480421 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
TMEM139-207ENST00000480421 PRDM2Q13029 1718 aa22.3■■□□□ 1.16
TMEM139-207ENST00000480421 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
TMEM139-207ENST00000480421 CFTRP13569 1480 aa22.28■■□□□ 1.16
TMEM139-207ENST00000480421 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
TMEM139-207ENST00000480421 TRIM41Q8WV44 630 aa22.08■■□□□ 1.13
TMEM139-207ENST00000480421 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
TMEM139-207ENST00000480421 CCDC88BA6NC98 1476 aa22■■□□□ 1.11
TMEM139-207ENST00000480421 IFT140Q96RY7 1462 aa21.92■■□□□ 1.1
TMEM139-207ENST00000480421 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
TMEM139-207ENST00000480421 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
TMEM139-207ENST00000480421 DNMBPQ6XZF7 1577 aa21.85■■□□□ 1.09
TMEM139-207ENST00000480421 ZNF608Q9ULD9 1512 aaPredicted RBP21.84■■□□□ 1.09
TMEM139-207ENST00000480421 EIF4G3O43432 1585 aaKnown RBP21.82■■□□□ 1.08
TMEM139-207ENST00000480421 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
TMEM139-207ENST00000480421 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
TMEM139-207ENST00000480421 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
TMEM139-207ENST00000480421 CHD1O14646 1710 aa21.74■■□□□ 1.07
TMEM139-207ENST00000480421 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
TMEM139-207ENST00000480421 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
TMEM139-207ENST00000480421 POLA1P09884 1462 aaPredicted RBP21.64■■□□□ 1.06
TMEM139-207ENST00000480421 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
TMEM139-207ENST00000480421 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
TMEM139-207ENST00000480421 SOGA1O94964 1423 aa21.54■■□□□ 1.04
TMEM139-207ENST00000480421 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
TMEM139-207ENST00000480421 FBLN2P98095 1184 aa21.51■■□□□ 1.03
TMEM139-207ENST00000480421 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
TMEM139-207ENST00000480421 TDRD9Q8NDG6 1382 aaKnown RBP21.47■■□□□ 1.03
TMEM139-207ENST00000480421 CYB5RLQ6IPT4 315 aa21.46■■□□□ 1.03
TMEM139-207ENST00000480421 CUX1P39880 1505 aa21.45■■□□□ 1.02
TMEM139-207ENST00000480421 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
TMEM139-207ENST00000480421 ARAP1Q96P48 1450 aa21.43■■□□□ 1.02
TMEM139-207ENST00000480421 PBRM1Q86U86 1689 aa21.43■■□□□ 1.02
TMEM139-207ENST00000480421 SYNJ1O43426 1573 aa21.42■■□□□ 1.02
TMEM139-207ENST00000480421 MAGI1Q96QZ7 1491 aaPredicted RBP21.42■■□□□ 1.02
TMEM139-207ENST00000480421 GRIN2BQ13224 1484 aa21.39■■□□□ 1.01
TMEM139-207ENST00000480421 CLASP1Q7Z460 1538 aa21.38■■□□□ 1.01
TMEM139-207ENST00000480421 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
TMEM139-207ENST00000480421 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
TMEM139-207ENST00000480421 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
TMEM139-207ENST00000480421 TRHP20396 242 aaPredicted RBP21.29■■□□□ 1
TMEM139-207ENST00000480421 ABCA5Q8WWZ7 1642 aa21.29■■□□□ 1
TMEM139-207ENST00000480421 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
TMEM139-207ENST00000480421 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
TMEM139-207ENST00000480421 BIVM-ERCC5R4GMW8 1640 aa21.19■□□□□ 0.98
TMEM139-207ENST00000480421 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
TMEM139-207ENST00000480421 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
TMEM139-207ENST00000480421 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
TMEM139-207ENST00000480421 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
TMEM139-207ENST00000480421 CEP170Q5SW79 1584 aa21.05■□□□□ 0.96
TMEM139-207ENST00000480421 ERICH3Q5RHP9 1530 aa21.04■□□□□ 0.96
TMEM139-207ENST00000480421 NUP160Q12769 1436 aa21.03■□□□□ 0.96
TMEM139-207ENST00000480421 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
TMEM139-207ENST00000480421 SHROOM2Q13796 1616 aa21.01■□□□□ 0.95
TMEM139-207ENST00000480421 ERCC6L2Q5T890 1561 aa20.99■□□□□ 0.95
TMEM139-207ENST00000480421 KIF13AQ9H1H9 1805 aa20.85■□□□□ 0.93
TMEM139-207ENST00000480421 RUSC2Q8N2Y8 1516 aa20.83■□□□□ 0.92
TMEM139-207ENST00000480421 PRG4Q92954 1404 aaPredicted RBP20.82■□□□□ 0.92
TMEM139-207ENST00000480421 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms