RNA–Protein interactions for RNA: ENST00000480419.1

CCDC141-206, Transcript of coiled-coil domain containing 141, humanhuman

TSL 2

Gene CCDC141, Length 2,328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-206ENST00000480419 NISCHQ9Y2I1 1504 aa17.4■□□□□ 0.38
CCDC141-206ENST00000480419 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
CCDC141-206ENST00000480419 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
CCDC141-206ENST00000480419 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
CCDC141-206ENST00000480419 DCAF1Q9Y4B6 1507 aa14.34□□□□□ -0.11
CCDC141-206ENST00000480419 DCAF8L2P0C7V8 631 aa14.23□□□□□ -0.13
CCDC141-206ENST00000480419 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
CCDC141-206ENST00000480419 MYO15BQ96JP2 1530 aa14.02□□□□□ -0.17
CCDC141-206ENST00000480419 ABCC9O60706 1549 aa13.92□□□□□ -0.18
CCDC141-206ENST00000480419 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
CCDC141-206ENST00000480419 NACADO15069 1562 aa13.85□□□□□ -0.19
CCDC141-206ENST00000480419 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
CCDC141-206ENST00000480419 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
CCDC141-206ENST00000480419 RSF1Q96T23 1441 aaPredicted RBP13.64□□□□□ -0.23
CCDC141-206ENST00000480419 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
CCDC141-206ENST00000480419 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
CCDC141-206ENST00000480419 MROH2BQ7Z745 1585 aa13.5□□□□□ -0.25
CCDC141-206ENST00000480419 WIZO95785 1651 aa13.42□□□□□ -0.26
CCDC141-206ENST00000480419 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
CCDC141-206ENST00000480419 AEBP2Q6ZN18 517 aaPredicted RBP13.37□□□□□ -0.27
CCDC141-206ENST00000480419 BICRAQ9NZM4 1560 aa13.34□□□□□ -0.27
CCDC141-206ENST00000480419 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
CCDC141-206ENST00000480419 EIF4G1Q04637 1599 aaKnown RBP13.23□□□□□ -0.29
CCDC141-206ENST00000480419 TOP2AP11388 1531 aaKnown RBP13.23□□□□□ -0.29
CCDC141-206ENST00000480419 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC141-206ENST00000480419 LOC105371045A0A1W2PR82 267 aa13.17□□□□□ -0.3
CCDC141-206ENST00000480419 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
CCDC141-206ENST00000480419 TRIM41Q8WV44 630 aa13.14□□□□□ -0.31
CCDC141-206ENST00000480419 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
CCDC141-206ENST00000480419 PEG3Q9GZU2 1588 aa13.11□□□□□ -0.31
CCDC141-206ENST00000480419 ABCC8Q09428 1581 aa13□□□□□ -0.33
CCDC141-206ENST00000480419 ATAD2BQ9ULI0 1458 aa13□□□□□ -0.33
CCDC141-206ENST00000480419 FAM9AQ8IZU1 332 aaPredicted RBP12.98□□□□□ -0.33
CCDC141-206ENST00000480419 BAZ1BQ9UIG0 1483 aaKnown RBP12.92□□□□□ -0.34
CCDC141-206ENST00000480419 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
CCDC141-206ENST00000480419 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
CCDC141-206ENST00000480419 EHMT2Q96KQ7 1210 aa12.83□□□□□ -0.36
CCDC141-206ENST00000480419 HMGXB3Q12766 1538 aa12.81□□□□□ -0.36
CCDC141-206ENST00000480419 SOGA1O94964 1423 aa12.81□□□□□ -0.36
CCDC141-206ENST00000480419 SYNJ1O43426 1573 aa12.8□□□□□ -0.36
CCDC141-206ENST00000480419 HRCP23327 699 aa12.8□□□□□ -0.36
CCDC141-206ENST00000480419 WRNQ14191 1432 aaPredicted RBP eCLIP12.8□□□□□ -0.36
CCDC141-206ENST00000480419 NCAPD3P42695 1498 aa12.79□□□□□ -0.36
CCDC141-206ENST00000480419 RUSC2Q8N2Y8 1516 aa12.77□□□□□ -0.37
CCDC141-206ENST00000480419 TRIM26Q12899 539 aaPredicted RBP12.75□□□□□ -0.37
CCDC141-206ENST00000480419 EEA1Q15075 1411 aa12.74□□□□□ -0.37
CCDC141-206ENST00000480419 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
CCDC141-206ENST00000480419 BIVM-ERCC5R4GMW8 1640 aa12.67□□□□□ -0.38
CCDC141-206ENST00000480419 CSRNP3Q8WYN3 585 aa12.66□□□□□ -0.38
CCDC141-206ENST00000480419 TNIKQ9UKE5 1360 aa12.65□□□□□ -0.38
CCDC141-206ENST00000480419 CEP162Q5TB80 1403 aa12.64□□□□□ -0.39
CCDC141-206ENST00000480419 KIF21BO75037 1637 aa12.63□□□□□ -0.39
CCDC141-206ENST00000480419 GOLGA3Q08378 1498 aa12.63□□□□□ -0.39
CCDC141-206ENST00000480419 CFTRP13569 1480 aa12.62□□□□□ -0.39
CCDC141-206ENST00000480419 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
CCDC141-206ENST00000480419 CC2D2AQ9P2K1 1620 aa12.6□□□□□ -0.39
CCDC141-206ENST00000480419 CUX1P39880 1505 aa12.59□□□□□ -0.39
CCDC141-206ENST00000480419 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
CCDC141-206ENST00000480419 PPARGC1BQ86YN6 1023 aaKnown RBP12.54□□□□□ -0.4
CCDC141-206ENST00000480419 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
CCDC141-206ENST00000480419 RAPGEF2Q9Y4G8 1499 aa12.52□□□□□ -0.4
CCDC141-206ENST00000480419 MYT1Q01538 1121 aa12.5□□□□□ -0.41
CCDC141-206ENST00000480419 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
CCDC141-206ENST00000480419 PRXQ9BXM0 1461 aa12.46□□□□□ -0.41
CCDC141-206ENST00000480419 ERICH3Q5RHP9 1530 aa12.46□□□□□ -0.42
CCDC141-206ENST00000480419 CLIP1P30622 1438 aa12.44□□□□□ -0.42
CCDC141-206ENST00000480419 KIF27Q86VH2 1401 aa12.41□□□□□ -0.42
CCDC141-206ENST00000480419 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
CCDC141-206ENST00000480419 FANCD2Q9BXW9 1451 aa12.38□□□□□ -0.43
CCDC141-206ENST00000480419 FGD5Q6ZNL6 1462 aa12.38□□□□□ -0.43
CCDC141-206ENST00000480419 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
CCDC141-206ENST00000480419 NESP48681 1621 aa12.36□□□□□ -0.43
CCDC141-206ENST00000480419 ZEB1P37275 1124 aaPredicted RBP12.35□□□□□ -0.43
CCDC141-206ENST00000480419 CUX2O14529 1486 aa12.35□□□□□ -0.43
CCDC141-206ENST00000480419 ARAP1Q96P48 1450 aa12.33□□□□□ -0.43
CCDC141-206ENST00000480419 DNMBPQ6XZF7 1577 aa12.33□□□□□ -0.44
CCDC141-206ENST00000480419 IGF1RP08069 1367 aa12.31□□□□□ -0.44
CCDC141-206ENST00000480419 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
CCDC141-206ENST00000480419 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
CCDC141-206ENST00000480419 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
CCDC141-206ENST00000480419 POLA1P09884 1462 aaPredicted RBP12.27□□□□□ -0.44
CCDC141-206ENST00000480419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.27□□□□□ -0.45
CCDC141-206ENST00000480419 DNAJC5BQ9UF47 199 aa12.26□□□□□ -0.45
CCDC141-206ENST00000480419 RAD54L2Q9Y4B4 1467 aa12.26□□□□□ -0.45
CCDC141-206ENST00000480419 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
CCDC141-206ENST00000480419 ABCA10Q8WWZ4 1543 aa12.26□□□□□ -0.45
CCDC141-206ENST00000480419 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
CCDC141-206ENST00000480419 URB2Q14146 1524 aaKnown RBP12.25□□□□□ -0.45
CCDC141-206ENST00000480419 WDR97A6NE52 1622 aa12.25□□□□□ -0.45
CCDC141-206ENST00000480419 CARMIL1Q5VZK9 1371 aa12.23□□□□□ -0.45
CCDC141-206ENST00000480419 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
CCDC141-206ENST00000480419 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
CCDC141-206ENST00000480419 CUL7Q14999 1698 aa12.17□□□□□ -0.46
CCDC141-206ENST00000480419 ABCA5Q8WWZ7 1642 aa12.16□□□□□ -0.46
CCDC141-206ENST00000480419 APLP2Q06481 763 aa12.16□□□□□ -0.46
CCDC141-206ENST00000480419 PDS5BQ9NTI5 1447 aa12.16□□□□□ -0.46
CCDC141-206ENST00000480419 KANK4Q5T7N3 995 aaPredicted RBP12.14□□□□□ -0.47
CCDC141-206ENST00000480419 SCAF1Q9H7N4 1312 aaKnown RBP12.14□□□□□ -0.47
CCDC141-206ENST00000480419 CTTNBP2Q8WZ74 1663 aa12.13□□□□□ -0.47
CCDC141-206ENST00000480419 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms