RNA–Protein interactions for RNA: ENST00000480356.1

F3-204, Transcript of coagulation factor III, tissue factor, humanhuman

TSL 5

Gene F3, Length 1,193 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
F3-204ENST00000480356 NISCHQ9Y2I1 1504 aa39.16■■■■□ 3.86
F3-204ENST00000480356 CCDC180Q9P1Z9 1646 aa34.99■■■■□ 3.19
F3-204ENST00000480356 ABCC9O60706 1549 aa34.63■■■■□ 3.13
F3-204ENST00000480356 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
F3-204ENST00000480356 DCAF8L2P0C7V8 631 aa33■■■□□ 2.87
F3-204ENST00000480356 NACADO15069 1562 aa32.93■■■□□ 2.86
F3-204ENST00000480356 ZCCHC6Q5VYS8 1495 aaKnown RBP32.54■■■□□ 2.8
F3-204ENST00000480356 MYO15BQ96JP2 1530 aa32.52■■■□□ 2.8
F3-204ENST00000480356 UNC13AQ9UPW8 1703 aa32.5■■■□□ 2.79
F3-204ENST00000480356 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
F3-204ENST00000480356 DCAF1Q9Y4B6 1507 aa32.29■■■□□ 2.76
F3-204ENST00000480356 BICRAQ9NZM4 1560 aa32.12■■■□□ 2.73
F3-204ENST00000480356 DNAJC5BQ9UF47 199 aa32.05■■■□□ 2.72
F3-204ENST00000480356 SCRIBQ14160 1630 aa32■■■□□ 2.71
F3-204ENST00000480356 SHROOM4Q9ULL8 1493 aa31.59■■■□□ 2.65
F3-204ENST00000480356 EIF4G1Q04637 1599 aaKnown RBP31.3■■■□□ 2.6
F3-204ENST00000480356 CC2D2AQ9P2K1 1620 aa31.3■■■□□ 2.6
F3-204ENST00000480356 CECR2Q9BXF3 1484 aa31.09■■■□□ 2.57
F3-204ENST00000480356 SMARCA4P51532 1647 aa30.51■■■□□ 2.47
F3-204ENST00000480356 BAZ1AQ9NRL2 1556 aaPredicted RBP30.37■■■□□ 2.45
F3-204ENST00000480356 ATAD2BQ9ULI0 1458 aa30.37■■■□□ 2.45
F3-204ENST00000480356 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
F3-204ENST00000480356 SMARCA2P51531 1590 aa30.32■■■□□ 2.44
F3-204ENST00000480356 MROH2BQ7Z745 1585 aa30.22■■■□□ 2.43
F3-204ENST00000480356 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
F3-204ENST00000480356 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
F3-204ENST00000480356 PEG3Q9GZU2 1588 aa30.12■■■□□ 2.41
F3-204ENST00000480356 WIZO95785 1651 aa29.95■■■□□ 2.39
F3-204ENST00000480356 NESP48681 1621 aa29.87■■■□□ 2.37
F3-204ENST00000480356 ERCC6Q03468 1493 aa29.85■■■□□ 2.37
F3-204ENST00000480356 RSF1Q96T23 1441 aaPredicted RBP29.7■■■□□ 2.34
F3-204ENST00000480356 LAMC3Q9Y6N6 1575 aa29.68■■■□□ 2.34
F3-204ENST00000480356 KIF21AQ7Z4S6 1674 aa29.57■■■□□ 2.32
F3-204ENST00000480356 CUX2O14529 1486 aa29.56■■■□□ 2.32
F3-204ENST00000480356 TOP2AP11388 1531 aaKnown RBP29.52■■■□□ 2.32
F3-204ENST00000480356 CADPSQ9ULU8 1353 aa29.47■■■□□ 2.31
F3-204ENST00000480356 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
F3-204ENST00000480356 PDS5BQ9NTI5 1447 aa29.45■■■□□ 2.3
F3-204ENST00000480356 CFTRP13569 1480 aa29.23■■■□□ 2.27
F3-204ENST00000480356 MRC2Q9UBG0 1479 aa29.2■■■□□ 2.26
F3-204ENST00000480356 FANCD2Q9BXW9 1451 aa29.19■■■□□ 2.26
F3-204ENST00000480356 CEP164Q9UPV0 1460 aa29.19■■■□□ 2.26
F3-204ENST00000480356 CCDC88BA6NC98 1476 aa29.17■■■□□ 2.26
F3-204ENST00000480356 PRDM2Q13029 1718 aa29.14■■■□□ 2.26
F3-204ENST00000480356 WDR62O43379 1518 aa29.11■■■□□ 2.25
F3-204ENST00000480356 DNAJC5Q9H3Z4 198 aa29.06■■■□□ 2.24
F3-204ENST00000480356 URB2Q14146 1524 aaKnown RBP28.94■■■□□ 2.22
F3-204ENST00000480356 SUPT5HO00267 1087 aaKnown RBP28.83■■■□□ 2.21
F3-204ENST00000480356 TOPBP1Q92547 1522 aa28.69■■■□□ 2.18
F3-204ENST00000480356 DNMBPQ6XZF7 1577 aa28.63■■■□□ 2.17
F3-204ENST00000480356 ABCC8Q09428 1581 aa28.6■■■□□ 2.17
F3-204ENST00000480356 IFT140Q96RY7 1462 aa28.55■■■□□ 2.16
F3-204ENST00000480356 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
F3-204ENST00000480356 EIF4G3O43432 1585 aaKnown RBP28.42■■■□□ 2.14
F3-204ENST00000480356 POLA1P09884 1462 aaPredicted RBP28.42■■■□□ 2.14
F3-204ENST00000480356 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
F3-204ENST00000480356 CUX1P39880 1505 aa28.36■■■□□ 2.13
F3-204ENST00000480356 RAD54L2Q9Y4B4 1467 aa28.35■■■□□ 2.13
F3-204ENST00000480356 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
F3-204ENST00000480356 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.123e-7■■■■□ 26.2
F3-204ENST00000480356 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
F3-204ENST00000480356 SOGA1O94964 1423 aa28.29■■■□□ 2.12
F3-204ENST00000480356 TDRD9Q8NDG6 1382 aaKnown RBP28.2■■■□□ 2.1
F3-204ENST00000480356 CHD1O14646 1710 aa28.2■■■□□ 2.1
F3-204ENST00000480356 WDR97A6NE52 1622 aa28.15■■■□□ 2.1
F3-204ENST00000480356 TRIM41Q8WV44 630 aa28.11■■■□□ 2.09
F3-204ENST00000480356 FBLN2P98095 1184 aa28.09■■■□□ 2.09
F3-204ENST00000480356 BIVM-ERCC5R4GMW8 1640 aa28.06■■■□□ 2.08
F3-204ENST00000480356 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
F3-204ENST00000480356 PBRM1Q86U86 1689 aa28.05■■■□□ 2.08
F3-204ENST00000480356 SYNJ1O43426 1573 aa28.04■■■□□ 2.08
F3-204ENST00000480356 WRNQ14191 1432 aaPredicted RBP eCLIP28.03■■■□□ 2.08
F3-204ENST00000480356 TOP2BQ02880 1626 aa28.02■■■□□ 2.08
F3-204ENST00000480356 RIMBP3CA6NJZ7 1639 aa28■■■□□ 2.07
F3-204ENST00000480356 RIMBP3BA6NNM3 1639 aa28■■■□□ 2.07
F3-204ENST00000480356 RIMBP3Q9UFD9 1639 aa28■■■□□ 2.07
F3-204ENST00000480356 GRIN2BQ13224 1484 aa27.98■■■□□ 2.07
F3-204ENST00000480356 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
F3-204ENST00000480356 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
F3-204ENST00000480356 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
F3-204ENST00000480356 MAGI1Q96QZ7 1491 aaPredicted RBP27.93■■■□□ 2.06
F3-204ENST00000480356 ARHGEF11O15085 1522 aa27.89■■■□□ 2.06
F3-204ENST00000480356 CHMP7Q8WUX9 453 aaPredicted RBP27.89■■■□□ 2.06
F3-204ENST00000480356 SYNJ2O15056 1496 aa27.84■■■□□ 2.05
F3-204ENST00000480356 CLASP1Q7Z460 1538 aa27.76■■■□□ 2.03
F3-204ENST00000480356 ADAMTS12P58397 1594 aa27.72■■■□□ 2.03
F3-204ENST00000480356 CYB5RLQ6IPT4 315 aa27.68■■■□□ 2.02
F3-204ENST00000480356 GRIN2AQ12879 1464 aa27.64■■■□□ 2.02
F3-204ENST00000480356 ARAP1Q96P48 1450 aa27.64■■■□□ 2.02
F3-204ENST00000480356 ERICH3Q5RHP9 1530 aa27.64■■■□□ 2.02
F3-204ENST00000480356 FHAD1B1AJZ9 1412 aa27.59■■■□□ 2.01
F3-204ENST00000480356 CEP170Q5SW79 1584 aa27.57■■■□□ 2
F3-204ENST00000480356 NUP160Q12769 1436 aa27.49■■□□□ 1.99
F3-204ENST00000480356 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
F3-204ENST00000480356 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
F3-204ENST00000480356 CUL7Q14999 1698 aa27.38■■□□□ 1.97
F3-204ENST00000480356 SHROOM2Q13796 1616 aa27.38■■□□□ 1.97
F3-204ENST00000480356 IGF1RP08069 1367 aa27.36■■□□□ 1.97
F3-204ENST00000480356 RUSC2Q8N2Y8 1516 aa27.32■■□□□ 1.96
F3-204ENST00000480356 TRHP20396 242 aaPredicted RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms