RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 NISCHQ9Y2I1 1504 aa37.54■■■■□ 3.6
CDK9-203ENST00000480353 CCDC180Q9P1Z9 1646 aa33.59■■■□□ 2.97
CDK9-203ENST00000480353 ABCC9O60706 1549 aa33.2■■■□□ 2.91
CDK9-203ENST00000480353 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
CDK9-203ENST00000480353 DCAF8L2P0C7V8 631 aa31.71■■■□□ 2.67
CDK9-203ENST00000480353 NACADO15069 1562 aa31.64■■■□□ 2.66
CDK9-203ENST00000480353 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.59
CDK9-203ENST00000480353 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
CDK9-203ENST00000480353 UNC13AQ9UPW8 1703 aa31.07■■■□□ 2.56
CDK9-203ENST00000480353 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
CDK9-203ENST00000480353 PABPN1Q86U42 306 aaKnown RBP eCLIP30.97■■■□□ 2.55
CDK9-203ENST00000480353 BICRAQ9NZM4 1560 aa30.73■■■□□ 2.51
CDK9-203ENST00000480353 DNAJC5BQ9UF47 199 aa30.66■■■□□ 2.5
CDK9-203ENST00000480353 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
CDK9-203ENST00000480353 SHROOM4Q9ULL8 1493 aa30.43■■■□□ 2.46
CDK9-203ENST00000480353 EIF4G1Q04637 1599 aaKnown RBP30.03■■■□□ 2.4
CDK9-203ENST00000480353 CC2D2AQ9P2K1 1620 aa30.01■■■□□ 2.39
CDK9-203ENST00000480353 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
CDK9-203ENST00000480353 SMARCA4P51532 1647 aa29.24■■■□□ 2.27
CDK9-203ENST00000480353 BAZ1AQ9NRL2 1556 aaPredicted RBP29.18■■■□□ 2.26
CDK9-203ENST00000480353 SMARCA2P51531 1590 aa29.14■■■□□ 2.26
CDK9-203ENST00000480353 NCAPD3P42695 1498 aa29.14■■■□□ 2.26
CDK9-203ENST00000480353 ATAD2BQ9ULI0 1458 aa29.12■■■□□ 2.25
CDK9-203ENST00000480353 HMGXB3Q12766 1538 aa29.01■■■□□ 2.23
CDK9-203ENST00000480353 BAZ1BQ9UIG0 1483 aaKnown RBP28.95■■■□□ 2.22
CDK9-203ENST00000480353 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
CDK9-203ENST00000480353 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
CDK9-203ENST00000480353 ERCC6Q03468 1493 aa28.73■■■□□ 2.19
CDK9-203ENST00000480353 WIZO95785 1651 aa28.65■■■□□ 2.18
CDK9-203ENST00000480353 NESP48681 1621 aa28.59■■■□□ 2.17
CDK9-203ENST00000480353 LAMC3Q9Y6N6 1575 aa28.51■■■□□ 2.15
CDK9-203ENST00000480353 CUX2O14529 1486 aa28.46■■■□□ 2.15
CDK9-203ENST00000480353 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
CDK9-203ENST00000480353 PDS5BQ9NTI5 1447 aa28.35■■■□□ 2.13
CDK9-203ENST00000480353 CADPSQ9ULU8 1353 aa28.32■■■□□ 2.12
CDK9-203ENST00000480353 KIF21AQ7Z4S6 1674 aa28.31■■■□□ 2.12
CDK9-203ENST00000480353 TOP2AP11388 1531 aaKnown RBP28.3■■■□□ 2.12
CDK9-203ENST00000480353 DNAJC5Q9H3Z4 198 aa28.23■■■□□ 2.11
CDK9-203ENST00000480353 THOC2Q8NI27 1593 aaKnown RBP28.23■■■□□ 2.11
CDK9-203ENST00000480353 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
CDK9-203ENST00000480353 CEP164Q9UPV0 1460 aa28.05■■■□□ 2.08
CDK9-203ENST00000480353 CFTRP13569 1480 aa28.04■■■□□ 2.08
CDK9-203ENST00000480353 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
CDK9-203ENST00000480353 CCDC88BA6NC98 1476 aa27.95■■■□□ 2.07
CDK9-203ENST00000480353 WDR62O43379 1518 aa27.94■■■□□ 2.06
CDK9-203ENST00000480353 PRDM2Q13029 1718 aa27.94■■■□□ 2.06
CDK9-203ENST00000480353 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
CDK9-203ENST00000480353 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
CDK9-203ENST00000480353 ABCC8Q09428 1581 aa27.54■■■□□ 2
CDK9-203ENST00000480353 TOPBP1Q92547 1522 aa27.51■■■□□ 2
CDK9-203ENST00000480353 DNMBPQ6XZF7 1577 aa27.48■■□□□ 1.99
CDK9-203ENST00000480353 IFT140Q96RY7 1462 aa27.45■■□□□ 1.99
CDK9-203ENST00000480353 ZNF608Q9ULD9 1512 aaPredicted RBP27.31■■□□□ 1.96
CDK9-203ENST00000480353 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
CDK9-203ENST00000480353 EIF4G3O43432 1585 aaKnown RBP27.25■■□□□ 1.95
CDK9-203ENST00000480353 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
CDK9-203ENST00000480353 TARBP1Q13395 1621 aaKnown RBP27.21■■□□□ 1.95
CDK9-203ENST00000480353 SOGA1O94964 1423 aa27.17■■□□□ 1.94
CDK9-203ENST00000480353 FGD5Q6ZNL6 1462 aa27.16■■□□□ 1.94
CDK9-203ENST00000480353 CUX1P39880 1505 aa27.16■■□□□ 1.94
CDK9-203ENST00000480353 RAD54L2Q9Y4B4 1467 aa27.15■■□□□ 1.94
CDK9-203ENST00000480353 AQRO60306 1485 aaKnown RBP eCLIP27.14■■□□□ 1.944e-8■■■■■ 32
CDK9-203ENST00000480353 TDRD9Q8NDG6 1382 aaKnown RBP27.05■■□□□ 1.92
CDK9-203ENST00000480353 TRIM41Q8WV44 630 aa27.04■■□□□ 1.92
CDK9-203ENST00000480353 WDR97A6NE52 1622 aa27.03■■□□□ 1.92
CDK9-203ENST00000480353 FBLN2P98095 1184 aa27.03■■□□□ 1.92
CDK9-203ENST00000480353 CHD1O14646 1710 aa27.02■■□□□ 1.92
CDK9-203ENST00000480353 SNAPC4Q5SXM2 1469 aa26.91■■□□□ 1.9
CDK9-203ENST00000480353 WRNQ14191 1432 aaPredicted RBP eCLIP26.9■■□□□ 1.9
CDK9-203ENST00000480353 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
CDK9-203ENST00000480353 PBRM1Q86U86 1689 aa26.88■■□□□ 1.89
CDK9-203ENST00000480353 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
CDK9-203ENST00000480353 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
CDK9-203ENST00000480353 CHMP7Q8WUX9 453 aaPredicted RBP26.86■■□□□ 1.89
CDK9-203ENST00000480353 GAPVD1Q14C86 1478 aa26.86■■□□□ 1.89
CDK9-203ENST00000480353 MAGI1Q96QZ7 1491 aaPredicted RBP26.86■■□□□ 1.89
CDK9-203ENST00000480353 ABCA10Q8WWZ4 1543 aa26.85■■□□□ 1.89
CDK9-203ENST00000480353 RIMBP3CA6NJZ7 1639 aa26.84■■□□□ 1.89
CDK9-203ENST00000480353 RIMBP3BA6NNM3 1639 aa26.84■■□□□ 1.89
CDK9-203ENST00000480353 RIMBP3Q9UFD9 1639 aa26.84■■□□□ 1.89
CDK9-203ENST00000480353 SYNJ1O43426 1573 aa26.83■■□□□ 1.89
CDK9-203ENST00000480353 ARHGEF11O15085 1522 aa26.78■■□□□ 1.88
CDK9-203ENST00000480353 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
CDK9-203ENST00000480353 SYNJ2O15056 1496 aa26.75■■□□□ 1.87
CDK9-203ENST00000480353 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
CDK9-203ENST00000480353 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
CDK9-203ENST00000480353 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
CDK9-203ENST00000480353 ERICH3Q5RHP9 1530 aa26.55■■□□□ 1.84
CDK9-203ENST00000480353 GRIN2AQ12879 1464 aa26.53■■□□□ 1.84
CDK9-203ENST00000480353 FHAD1B1AJZ9 1412 aa26.52■■□□□ 1.84
CDK9-203ENST00000480353 ARAP1Q96P48 1450 aa26.51■■□□□ 1.83
CDK9-203ENST00000480353 CEP170Q5SW79 1584 aa26.4■■□□□ 1.82
CDK9-203ENST00000480353 KIF27Q86VH2 1401 aa26.39■■□□□ 1.82
CDK9-203ENST00000480353 NUP160Q12769 1436 aa26.38■■□□□ 1.81
CDK9-203ENST00000480353 CUL7Q14999 1698 aa26.3■■□□□ 1.8
CDK9-203ENST00000480353 TRHP20396 242 aaPredicted RBP26.29■■□□□ 1.8
CDK9-203ENST00000480353 IGF1RP08069 1367 aa26.24■■□□□ 1.79
CDK9-203ENST00000480353 SHROOM2Q13796 1616 aa26.24■■□□□ 1.79
CDK9-203ENST00000480353 ERCC6L2Q5T890 1561 aa26.21■■□□□ 1.79
CDK9-203ENST00000480353 JPH4Q96JJ6 628 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms