RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
CNKSR1-204ENST00000480348 CCDC180Q9P1Z9 1646 aa24.2■■□□□ 1.46
CNKSR1-204ENST00000480348 ABCC9O60706 1549 aa23.81■■□□□ 1.4
CNKSR1-204ENST00000480348 RB1CC1Q8TDY2 1594 aa22.89■■□□□ 1.26
CNKSR1-204ENST00000480348 NACADO15069 1562 aa22.76■■□□□ 1.23
CNKSR1-204ENST00000480348 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
CNKSR1-204ENST00000480348 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
CNKSR1-204ENST00000480348 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
CNKSR1-204ENST00000480348 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
CNKSR1-204ENST00000480348 DCAF1Q9Y4B6 1507 aa22.27■■□□□ 1.16
CNKSR1-204ENST00000480348 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
CNKSR1-204ENST00000480348 PABPN1Q86U42 306 aaKnown RBP eCLIP22.07■■□□□ 1.12
CNKSR1-204ENST00000480348 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
CNKSR1-204ENST00000480348 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
CNKSR1-204ENST00000480348 SCRIBQ14160 1630 aa21.9■■□□□ 1.1
CNKSR1-204ENST00000480348 CC2D2AQ9P2K1 1620 aa21.61■■□□□ 1.05
CNKSR1-204ENST00000480348 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
CNKSR1-204ENST00000480348 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
CNKSR1-204ENST00000480348 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
CNKSR1-204ENST00000480348 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
CNKSR1-204ENST00000480348 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
CNKSR1-204ENST00000480348 BAZ1AQ9NRL2 1556 aaPredicted RBP20.89■□□□□ 0.94
CNKSR1-204ENST00000480348 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
CNKSR1-204ENST00000480348 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
CNKSR1-204ENST00000480348 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
CNKSR1-204ENST00000480348 BAZ1BQ9UIG0 1483 aaKnown RBP20.71■□□□□ 0.91
CNKSR1-204ENST00000480348 ERCC6Q03468 1493 aa20.63■□□□□ 0.89
CNKSR1-204ENST00000480348 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
CNKSR1-204ENST00000480348 CUX2O14529 1486 aa20.6■□□□□ 0.89
CNKSR1-204ENST00000480348 LAMC3Q9Y6N6 1575 aa20.53■□□□□ 0.88
CNKSR1-204ENST00000480348 NESP48681 1621 aa20.48■□□□□ 0.87
CNKSR1-204ENST00000480348 WIZO95785 1651 aa20.43■□□□□ 0.86
CNKSR1-204ENST00000480348 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
CNKSR1-204ENST00000480348 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
CNKSR1-204ENST00000480348 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
CNKSR1-204ENST00000480348 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
CNKSR1-204ENST00000480348 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
CNKSR1-204ENST00000480348 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
CNKSR1-204ENST00000480348 RSF1Q96T23 1441 aaPredicted RBP20.23■□□□□ 0.83
CNKSR1-204ENST00000480348 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
CNKSR1-204ENST00000480348 WDR62O43379 1518 aa20.14■□□□□ 0.81
CNKSR1-204ENST00000480348 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
CNKSR1-204ENST00000480348 CEP164Q9UPV0 1460 aa20.12■□□□□ 0.81
CNKSR1-204ENST00000480348 CFTRP13569 1480 aa20.1■□□□□ 0.81
CNKSR1-204ENST00000480348 FANCD2Q9BXW9 1451 aa20.06■□□□□ 0.8
CNKSR1-204ENST00000480348 CCDC88BA6NC98 1476 aa19.9■□□□□ 0.78
CNKSR1-204ENST00000480348 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
CNKSR1-204ENST00000480348 ABCC8Q09428 1581 aa19.75■□□□□ 0.75
CNKSR1-204ENST00000480348 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
CNKSR1-204ENST00000480348 TOPBP1Q92547 1522 aa19.71■□□□□ 0.75
CNKSR1-204ENST00000480348 IFT140Q96RY7 1462 aa19.7■□□□□ 0.74
CNKSR1-204ENST00000480348 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
CNKSR1-204ENST00000480348 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
CNKSR1-204ENST00000480348 TARBP1Q13395 1621 aaKnown RBP19.55■□□□□ 0.72
CNKSR1-204ENST00000480348 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
CNKSR1-204ENST00000480348 POLA1P09884 1462 aaPredicted RBP19.51■□□□□ 0.71
CNKSR1-204ENST00000480348 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
CNKSR1-204ENST00000480348 CHD1O14646 1710 aa19.45■□□□□ 0.7
CNKSR1-204ENST00000480348 FGD5Q6ZNL6 1462 aa19.41■□□□□ 0.7
CNKSR1-204ENST00000480348 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
CNKSR1-204ENST00000480348 CUX1P39880 1505 aa19.4■□□□□ 0.7
CNKSR1-204ENST00000480348 RIMBP3CA6NJZ7 1639 aa19.38■□□□□ 0.69
CNKSR1-204ENST00000480348 RIMBP3BA6NNM3 1639 aa19.38■□□□□ 0.69
CNKSR1-204ENST00000480348 AQRO60306 1485 aaKnown RBP eCLIP19.38■□□□□ 0.69
CNKSR1-204ENST00000480348 SOGA1O94964 1423 aa19.38■□□□□ 0.69
CNKSR1-204ENST00000480348 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
CNKSR1-204ENST00000480348 RIMBP3Q9UFD9 1639 aa19.38■□□□□ 0.69
CNKSR1-204ENST00000480348 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
CNKSR1-204ENST00000480348 ARHGEF11O15085 1522 aa19.31■□□□□ 0.68
CNKSR1-204ENST00000480348 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
CNKSR1-204ENST00000480348 MAGI1Q96QZ7 1491 aaPredicted RBP19.29■□□□□ 0.68
CNKSR1-204ENST00000480348 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.67
CNKSR1-204ENST00000480348 TDRD9Q8NDG6 1382 aaKnown RBP19.26■□□□□ 0.67
CNKSR1-204ENST00000480348 GRIN2BQ13224 1484 aa19.26■□□□□ 0.67
CNKSR1-204ENST00000480348 ABCA5Q8WWZ7 1642 aa19.24■□□□□ 0.67
CNKSR1-204ENST00000480348 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
CNKSR1-204ENST00000480348 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
CNKSR1-204ENST00000480348 ABCA10Q8WWZ4 1543 aa19.22■□□□□ 0.67
CNKSR1-204ENST00000480348 TOP2BQ02880 1626 aa19.21■□□□□ 0.67
CNKSR1-204ENST00000480348 FBLN2P98095 1184 aa19.19■□□□□ 0.66
CNKSR1-204ENST00000480348 SYNJ2O15056 1496 aa19.19■□□□□ 0.66
CNKSR1-204ENST00000480348 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
CNKSR1-204ENST00000480348 CLASP1Q7Z460 1538 aa19.18■□□□□ 0.66
CNKSR1-204ENST00000480348 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
CNKSR1-204ENST00000480348 CHMP7Q8WUX9 453 aaPredicted RBP19.12■□□□□ 0.65
CNKSR1-204ENST00000480348 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
CNKSR1-204ENST00000480348 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
CNKSR1-204ENST00000480348 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
CNKSR1-204ENST00000480348 CYB5RLQ6IPT4 315 aa19.02■□□□□ 0.64
CNKSR1-204ENST00000480348 GRIN2AQ12879 1464 aa19.02■□□□□ 0.63
CNKSR1-204ENST00000480348 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
CNKSR1-204ENST00000480348 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
CNKSR1-204ENST00000480348 NUP160Q12769 1436 aa18.93■□□□□ 0.62
CNKSR1-204ENST00000480348 SHROOM2Q13796 1616 aa18.91■□□□□ 0.62
CNKSR1-204ENST00000480348 CUL7Q14999 1698 aa18.85■□□□□ 0.61
CNKSR1-204ENST00000480348 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
CNKSR1-204ENST00000480348 ERCC6L2Q5T890 1561 aa18.79■□□□□ 0.6
CNKSR1-204ENST00000480348 KIF27Q86VH2 1401 aa18.78■□□□□ 0.6
CNKSR1-204ENST00000480348 TRHP20396 242 aaPredicted RBP18.78■□□□□ 0.6
CNKSR1-204ENST00000480348 PRG4Q92954 1404 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms