RNA–Protein interactions for RNA: ENST00000480347.1

LCN6-204, Transcript of lipocalin 6, humanhuman

TSL 4

Gene LCN6, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN6-204ENST00000480347 NISCHQ9Y2I1 1504 aa31.68■■■□□ 2.66
LCN6-204ENST00000480347 ABCC9O60706 1549 aa28.83■■■□□ 2.21
LCN6-204ENST00000480347 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
LCN6-204ENST00000480347 DNAJC5BQ9UF47 199 aa27.82■■■□□ 2.04
LCN6-204ENST00000480347 RB1CC1Q8TDY2 1594 aa27.02■■□□□ 1.92
LCN6-204ENST00000480347 NACADO15069 1562 aa26.81■■□□□ 1.88
LCN6-204ENST00000480347 PABPN1Q86U42 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
LCN6-204ENST00000480347 DCAF8L2P0C7V8 631 aa26.77■■□□□ 1.88
LCN6-204ENST00000480347 MYO15BQ96JP2 1530 aa26.45■■□□□ 1.83
LCN6-204ENST00000480347 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
LCN6-204ENST00000480347 BICRAQ9NZM4 1560 aa26.34■■□□□ 1.81
LCN6-204ENST00000480347 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
LCN6-204ENST00000480347 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
LCN6-204ENST00000480347 DNAJC5Q9H3Z4 198 aa26.09■■□□□ 1.77
LCN6-204ENST00000480347 CECR2Q9BXF3 1484 aa26.03■■□□□ 1.76
LCN6-204ENST00000480347 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
LCN6-204ENST00000480347 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
LCN6-204ENST00000480347 SHROOM4Q9ULL8 1493 aa25.8■■□□□ 1.72
LCN6-204ENST00000480347 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
LCN6-204ENST00000480347 CUX2O14529 1486 aa25.1■■□□□ 1.61
LCN6-204ENST00000480347 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
LCN6-204ENST00000480347 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
LCN6-204ENST00000480347 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
LCN6-204ENST00000480347 TRIM41Q8WV44 630 aa24.67■■□□□ 1.54
LCN6-204ENST00000480347 SMARCA4P51532 1647 aa24.67■■□□□ 1.54
LCN6-204ENST00000480347 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
LCN6-204ENST00000480347 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
LCN6-204ENST00000480347 NESP48681 1621 aa24.54■■□□□ 1.52
LCN6-204ENST00000480347 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
LCN6-204ENST00000480347 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
LCN6-204ENST00000480347 BAZ1BQ9UIG0 1483 aaKnown RBP24.45■■□□□ 1.5
LCN6-204ENST00000480347 PEG3Q9GZU2 1588 aa24.44■■□□□ 1.5
LCN6-204ENST00000480347 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
LCN6-204ENST00000480347 LAMC3Q9Y6N6 1575 aa24.19■■□□□ 1.46
LCN6-204ENST00000480347 KIF21AQ7Z4S6 1674 aa24.17■■□□□ 1.46
LCN6-204ENST00000480347 WIZO95785 1651 aa24.11■■□□□ 1.45
LCN6-204ENST00000480347 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
LCN6-204ENST00000480347 CADPSQ9ULU8 1353 aa24.08■■□□□ 1.45
LCN6-204ENST00000480347 RSF1Q96T23 1441 aaPredicted RBP23.94■■□□□ 1.42
LCN6-204ENST00000480347 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
LCN6-204ENST00000480347 MRC2Q9UBG0 1479 aa23.92■■□□□ 1.42
LCN6-204ENST00000480347 WDR62O43379 1518 aa23.86■■□□□ 1.41
LCN6-204ENST00000480347 CFTRP13569 1480 aa23.8■■□□□ 1.4
LCN6-204ENST00000480347 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
LCN6-204ENST00000480347 CEP164Q9UPV0 1460 aa23.76■■□□□ 1.39
LCN6-204ENST00000480347 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
LCN6-204ENST00000480347 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.38
LCN6-204ENST00000480347 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.38
LCN6-204ENST00000480347 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.38
LCN6-204ENST00000480347 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
LCN6-204ENST00000480347 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
LCN6-204ENST00000480347 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
LCN6-204ENST00000480347 TRHP20396 242 aaPredicted RBP23.47■■□□□ 1.35
LCN6-204ENST00000480347 CYB5RLQ6IPT4 315 aa23.46■■□□□ 1.35
LCN6-204ENST00000480347 PRDM2Q13029 1718 aa23.38■■□□□ 1.33
LCN6-204ENST00000480347 ZNF608Q9ULD9 1512 aaPredicted RBP23.38■■□□□ 1.33
LCN6-204ENST00000480347 AEBP2Q6ZN18 517 aaPredicted RBP23.37■■□□□ 1.33
LCN6-204ENST00000480347 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
LCN6-204ENST00000480347 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
LCN6-204ENST00000480347 ABCC8Q09428 1581 aa23.19■■□□□ 1.3
LCN6-204ENST00000480347 DNMBPQ6XZF7 1577 aa23.19■■□□□ 1.3
LCN6-204ENST00000480347 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
LCN6-204ENST00000480347 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.3
LCN6-204ENST00000480347 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
LCN6-204ENST00000480347 EIF4G3O43432 1585 aaKnown RBP23.13■■□□□ 1.29
LCN6-204ENST00000480347 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
LCN6-204ENST00000480347 CHD1O14646 1710 aa23.09■■□□□ 1.29
LCN6-204ENST00000480347 FBLN2P98095 1184 aa23.09■■□□□ 1.29
LCN6-204ENST00000480347 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
LCN6-204ENST00000480347 TDRD9Q8NDG6 1382 aaKnown RBP23.01■■□□□ 1.27
LCN6-204ENST00000480347 SOGA1O94964 1423 aa23■■□□□ 1.27
LCN6-204ENST00000480347 CUX1P39880 1505 aa22.95■■□□□ 1.26
LCN6-204ENST00000480347 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
LCN6-204ENST00000480347 SUPT5HO00267 1087 aaKnown RBP22.85■■□□□ 1.25
LCN6-204ENST00000480347 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
LCN6-204ENST00000480347 CLASP1Q7Z460 1538 aa22.77■■□□□ 1.24
LCN6-204ENST00000480347 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
LCN6-204ENST00000480347 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
LCN6-204ENST00000480347 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
LCN6-204ENST00000480347 MAGI1Q96QZ7 1491 aaPredicted RBP22.74■■□□□ 1.23
LCN6-204ENST00000480347 SYNJ1O43426 1573 aa22.7■■□□□ 1.22
LCN6-204ENST00000480347 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
LCN6-204ENST00000480347 GAPVD1Q14C86 1478 aa22.69■■□□□ 1.22
LCN6-204ENST00000480347 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
LCN6-204ENST00000480347 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
LCN6-204ENST00000480347 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
LCN6-204ENST00000480347 WRNQ14191 1432 aaPredicted RBP eCLIP22.56■■□□□ 1.2
LCN6-204ENST00000480347 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
LCN6-204ENST00000480347 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
LCN6-204ENST00000480347 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
LCN6-204ENST00000480347 ERCC6L2Q5T890 1561 aa22.47■■□□□ 1.19
LCN6-204ENST00000480347 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
LCN6-204ENST00000480347 NUP160Q12769 1436 aa22.44■■□□□ 1.18
LCN6-204ENST00000480347 ILDR1Q86SU0 546 aaPredicted RBP22.44■■□□□ 1.18
LCN6-204ENST00000480347 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
LCN6-204ENST00000480347 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
LCN6-204ENST00000480347 KIF13AQ9H1H9 1805 aa22.36■■□□□ 1.17
LCN6-204ENST00000480347 ERICH3Q5RHP9 1530 aa22.35■■□□□ 1.17
LCN6-204ENST00000480347 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
LCN6-204ENST00000480347 KDM4FA0A1W2PPD8 638 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms